BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472174
Length=1896
Score E
Sequences producing significant alignments: (Bits) Value
AT1G19450.1 | Symbols: | Major facilitator superfamily protein... 2765 0.0
AT1G75220.1 | Symbols: | Major facilitator superfamily protein... 1537 0.0
> AT1G19450.1 | Symbols: | Major facilitator superfamily protein
| chr1:6731434-6734882 REVERSE LENGTH=1953
Length=1953
Score = 2765 bits (1497), Expect = 0.0
Identities = 1807/1947 (93%), Gaps = 59/1947 (3%)
Strand=Plus/Plus
Query 1 GGAAAACTATGAAACAGTCTGCGTCTCTCCACGCAAAGGCTCAATTTTTATAAACCATGA 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 GGAAAACTATGAAACAGTCTGCGTCTCTCCACGCAAAGGCTCAATTTTTACAAACCATGA 60
Query 61 AGAATT-TT----TAAACAA-TC-AA-A-CAAAAAGAAGTCGA--CATCTTTTTGAA-CA 108
|||||| || |||||| || || | | ||| || | || | || |
Sbjct 61 AGAATTCTTAAGCAAAACAAGTCTAACATCTTTTTGAATTC-ACCCA-AAACTCAAATCC 118
Query 109 AACCTCAAATTTCGt-ttttt-ttCTTCTGCATTTTCTAGTTTAGGATCAACATTTTTAT 166
|||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 119 TACCTCAAATTTCGTATTTTTCTTCTTCTGCATTTTCTAGTTTAGGATCGACATTTTTAT 178
Query 167 -CTCAGACCCTTTTCGGATTCGTCTTT-T-TCTGTAGATTACGATTGTTTTGTAGATTT- 222
||| || ||| | | | | ||| | |||||||||||||||||||||||||||||
Sbjct 179 CCTCCGA-AAGATTC-G-TGCTTTTTTCTCTCTGTAGATTACGATTGTTTTGTAGATTTA 235
Query 223 AG--CGATAAAAAGATGAGTTTTAGGGATG---ATACGGAAGAGGGAAGAAATGATCTTC 277
|| | |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 236 AGAAAAACAAAAAGATGAGTTTTAGGGATGATAATACGGAAGAGGGAAGAAATGATCTTC 295
Query 278 GGCGACCGTTCTTACACACCGGAAGTTGGTATCGGATGGGTTCGAGACAATCTAGTATGT 337
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 296 GGCGACCGTTCTTACACACAGGAAGTTGGTATCGGATGGGTTCGAGACAATCTAGTATGT 355
Query 338 TGGAATCGTCTCAAGTTATTCGAGACAGCTCAATTTCTGTCTTAGCTTGTGTTTTGATTG 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TGGAATCGTCTCAAGTTATTCGAGACAGCTCAATTTCTGTCTTAGCTTGTGTTTTGATTG 415
Query 398 TTGCTCTTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCCTCACCAACTCAAGCTG 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 TTGCTCTTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCCTCACCAACTCAAGCTG 475
Query 458 CCATTACTAAGGATCTTGGTTTAACTGTATCAGAGTACTCTGTCTTTGGGTCTCTATCCA 517
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 476 CCATTACTAAGGATCTTGGTTTAACTGTATCAGAGTACTCTGTGTTTGGGTCTCTATCCA 535
Query 518 ATGTGGGTGCTATGGTTGGAGCAATTGCAAGTGGTCAGATTGCTGAATACATTGGACGGA 577
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 536 ATGTGGGTGCTATGGTTGGAGCAATTGCGAGTGGTCAGATTGCTGAATACGTTGGACGGA 595
Query 578 AAGGGTCTTTGATGATTGCTGCAATTCCCAATATTATTGGATGGCTTTCGATATCATTTG 637
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 AAGGGTCTCTGATGATTGCTGCAATTCCCAATATTATTGGATGGCTTTCGATATCATTTG 655
Query 638 CAAAAGATACTTCTTTTCTTTACATGGGAAGATTGTTAGAAGGTTTCGGCGTTGGGATAA 697
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 656 CAAAAGATACTTCTTTTCTTTACATGGGAAGATTGTTAGAAGGCTTCGGAGTTGGGATTA 715
Query 698 TCTCTTATACGGTGCCCGTGTATATAGCTGAGATCGCTCCACAGCAC-ATGAGAGGAGCC 756
|||| |||||||| ||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct 716 TCTCCTATACGGTTCCCGTATATATAGCTGAGATCGCTCCACAG-ACCATGAGAGGAGCC 774
Query 757 TTAGGTTCAGTTAACCAGCTTTCTGTAACAATTGGGATAATGCTGGCGTATTTACTCGGT 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TTAGGTTCAGTTAACCAGCTTTCTGTAACAATTGGGATAATGCTGGCGTATTTACTCGGT 834
Query 817 CTCTTTGTTCCATGGAGAATTCTTGCTGTTTTGGGAGTATTGCCATGTACATTGTTGATA 876
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 835 CTCTTTGTTCCATGGAGAATTCTTGCAGTTTTGGGAGTATTGCCATGTACATTGTTGATA 894
Query 877 CCGGGTCTGTTTTTCATTCCTGAATCTCCTCGGTGGTTGGCAAAGATGGGGTTGACAGAT 936
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 895 CCGGGTCTTTTTTTCATTCCTGAATCTCCTCGGTGGTTGGCAAAGATGGGTTTGACAGAT 954
Query 937 GATTTCGAAACTTCATTGCAAGTTCTTCGTGGATTTGATACTGATATCACCGTTGAGGTT 996
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 955 GATTTCGAAACTTCATTGCAAGTTCTTCGTGGATTTGAGACTGATATTACCGTTGAGGTT 1014
Query 997 AATGAAATCAAGAGATCTGTGGCATCATCTGGCAAACGTTCTGCAATTCGGTTTGTAGAC 1056
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1015 AATGAAATCAAGAGATCTGTGGCATCATCTAGCAAACGTTCTGCAGTTCGGTTTGTAGAC 1074
Query 1057 CTCAAGCGCAGGAGATACTATTTCCCACTGATGGTTGGTATAGGGCTGCTTGTACTTCAA 1116
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1075 CTCAAGCGCAGGAGATACTATTTCCCACTGATGGTTGGTATAGGGCTGCTTGCACTTCAA 1134
Query 1117 CAACTTGGAGGAATTAATGGTGTCTTGTTCTATTCGAGTACAATTTTTGAATCTGCAGGG 1176
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CAACTTGGAGGAATCAATGGTGTCTTGTTCTATTCGAGTACAATTTTTGAATCTGCAGGG 1194
Query 1177 GTGACATCAAGTAATGTGGCGACATTTGGAGTTGGCGTTGTTCAGGTAGTGGCGACTGC- 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 GTGACATCAAGTAATGTGGCGACATTTGGAGTTGGCGTTGTTCAGGTAGTGGCGACTGGG 1254
Query 1236 AGTAGCGACATGGTTGGTGGATAAATCAGGTCGTCGACTTCTGCTCATGATCTCATCCAT 1295
| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||| || ||
Sbjct 1255 A-TAGCGACATGGTTGGTGGATAAAGCAGGTCGTCGGCTTCTACTCATGATCTCTTCTAT 1313
Query 1296 CGGAATGACGATAAGCCTCGTGATTGTAGCAGTTGCATTTTATCTTAAGGAATTCATATC 1355
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1314 CGGAATGACGATAAGCCTCGTGATTGTAGCAGTTGCATTTTACCTTAAGGAATTTGTATC 1373
Query 1356 ACCTGATTCCAACATGTACAACATTCTAAGCATGGTTTCCGTAGTTGGAGTTGTGGCTAT 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 ACCTGATTCCAACATGTACAACATTCTAAGCATGGTTTCCGTAGTTGGAGTTGTGGCTAT 1433
Query 1416 GGTTATTTCATGTTCTCTAGGAATGGGACCAATTCCATGGCTGATTATGTCTGAGATTCT 1475
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 GGTTATTTCTTGCTCTCTAGGAATGGGACCAATTCCATGGCTGATTATGTCTGAGATTCT 1493
Query 1476 GCCAGTGAATATAAAGGGTTTAGCCGGAAGTATAGCAACTTTGCTAAACTGGTTCGTGTC 1535
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1494 GCCAGTGAATATAAAGGGTTTAGCCGGAAGTATAGCAACTTTGTTAAACTGGTTCGTGTC 1553
Query 1536 ATGGTTAGTGACAATGACTGCAAATATGCTCTTAGCGTGGAGCAGTGGAGGAACTTTCAC 1595
|||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 1554 ATGGTTAGTGACAATGACTGCAAATATGCTGTTAGCATGGAGCAGTGGGGGAACTTTCAC 1613
Query 1596 TCTATACGCTTTGGTTTGTGGATTCACTGTGGTCTTTGTGAGTCTTTGGGTTCCTGAGAC 1655
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1614 TCTCTACGCTTTGGTTTGTGGATTCACTGTGGTTTTTGTGAGTCTTTGGGTTCCTGAGAC 1673
Query 1656 TAAAGGCAAAACGCTTGAAGAGATTCAAGCTTTGTTCAGATGATCAAAACAAGAAGA--- 1712
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1674 TAAAGGAAAAACGCTTGAAGAGATCCAAGCTTTGTTCAGATGATCAAAACAAGAAGAGGA 1733
Query 1713 --------------TTTTG-CTTT---CT--C-C-ATTACAGATCATTCTTTTGGTCCCT 1750
|||| |||| || | | ||||||||||||||||||| |||||
Sbjct 1734 AGAAGAAGACAAAATTTTCACTTTTTGCTTTCTCCATTACAGATCATTCTTTTG-TCCCT 1792
Query 1751 TCTCTGTGTCTGTATTTCTTGCTTTGTTCAATGTCTTTCTTTTTGACATTGATTATAATT 1810
|| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1793 TCCCTGTGTCTGTATTTCATGCTTTGTTCAATGTATTTCTTCTTGACATTGATTATAATT 1852
Query 1811 TGTTTATCTTGTACAAGCATATCATTTTACCTTTAAATTCGACCCTCTATTTTT-TGTGT 1869
|||||||||||||||||||||||||| |||||||||||| || | | ||||| |||||
Sbjct 1853 TGTTTATCTTGTACAAGCATATCATTATACCTTTAAATTTGATTTTTTGTTTTTGTGTGT 1912
Query 1870 AATTTTCCGGATTTTCAAGATTAATAG 1896
|||||| |||||| |||||||||||||
Sbjct 1913 AATTTTTCGGATTCTCAAGATTAATAG 1939
> AT1G75220.1 | Symbols: | Major facilitator superfamily protein
| chr1:28229157-28232831 REVERSE LENGTH=1944
Length=1944
Score = 1537 bits (832), Expect = 0.0
Identities = 1283/1497 (86%), Gaps = 46/1497 (3%)
Strand=Plus/Plus
Query 230 AAAAGATGAGTTTTAGGGATGATACGGAAGAGGGAAGAAATGATCTT-CGGCGACCG-TT 287
||||||||||||| |||||||||| || |||| || |||||| || || || ||| ||
Sbjct 221 AAAAGATGAGTTTCAGGGATGATAATGAGGAGGCTAGGAATGAT-TTGCGTCGGCCGTTT 279
Query 288 CTTACACACCGGAAGTTGGTATCGGATGGGTTCGAGACAATCTAGTATGTTGGAATCGTC 347
|| ||||||||||| ||||| |||||||||||||||||||| |||||| ||| || ||
Sbjct 280 ATT-CACACCGGAAGCTGGTACCGGATGGGTTCGAGACAATCGAGTATGATGGGTTCCTC 338
Query 348 TCAAGTTATTCGAGACAGCTCAATTTCTG-TCTTAGCTTGTGTTTTGATTGTTGCTCTTG 406
||||||||||||||||||||| || |||| |||| || ||||||||||| ||||||||||
Sbjct 339 TCAAGTTATTCGAGACAGCTCTATCTCTGTTCTT-GCATGTGTTTTGATCGTTGCTCTTG 397
Query 407 GTCCTATTCAATTCGGATTCACTTGTGGTTATTCCTCACCAACTCAAGCTGCCATTACTA 466
| |||||||||||||||||||||||||||||||| || |||||||||||||| || || |
Sbjct 398 GCCCTATTCAATTCGGATTCACTTGTGGTTATTCATCTCCAACTCAAGCTGCAATCACCA 457
Query 467 AGGATCTTGGTTTAACTGTATCAGAGTACTCTGTCTTTGGGTCTCTATCCAATGTGGGTG 526
||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||
Sbjct 458 AGGATCTCGGTTTAACAGTATCTGAGTACTCTGTGTTTGGTTCTCTTTCCAATGTGGGTG 517
Query 527 CTATGGTTGGAGCAATTGCAAGTGGTCAGATTGCTGAATACATTGGACGGAAAGGGTCT- 585
|||||||||| |||||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct 518 CTATGGTTGGTGCAATTGCCAGTGGTCAGATTGCAGAATACATTGGACGAAAAGGGTCTC 577
Query 586 TTGATGATTGCTGCAATTCCCAATATTATTGGATGGCTTTCG-ATATCATTTGCAAAAGA 644
|| ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct 578 TT-ATGATTGCTGCAATTCCCAATATCATTGGATGGCTTT-GCATATCATTTGCAAAAGA 635
Query 645 TACTTCTTTTCTTTACATGGGAAGA-TTGTTAGAAGG-TTTCGGCGTTGGGATAATCTCT 702
||||||||||||||||||||||||| || |||||||| ||| ||||||||||| ||||||
Sbjct 636 TACTTCTTTTCTTTACATGGGAAGACTT-TTAGAAGGCTTT-GGCGTTGGGATCATCTCT 693
Query 703 TATACGGTGCCCGTGTATATAGCTGAGATCGCTCCACAGCACATGAGAGGAGCCTTAGGT 762
|| || || || || ||||| |||||||| |||||||| | |||||||||| || |||
Sbjct 694 TACACTGTACCTGTATATATCGCTGAGATAGCTCCACAAAATATGAGAGGAGGATTGGGT 753
Query 763 TCAGTTAACCAGCTTTCTGTAACAATTGGGATAATGCTGGCGTATTTACTCGGTCTCTTT 822
|| ||||||||||||||||| |||||||| |||||| ||||||||||||| || ||||||
Sbjct 754 TCGGTTAACCAGCTTTCTGTGACAATTGGAATAATGTTGGCGTATTTACTTGGCCTCTTT 813
Query 823 GTTCCATGGAGAATTCTTGCTGTTTTGGG-AGTATTGCCATGTACATTGTTGATACCGGG 881
|||||||||||||||||||| ||| |||| | ||||||| |||||||| |||||||| ||
Sbjct 814 GTTCCATGGAGAATTCTTGCAGTTCTGGGGA-TATTGCCGTGTACATTATTGATACCAGG 872
Query 882 TCTGTTTTTCATTCCTGAATCTCCTCGGTGGTTGGCAAAGATGGGGT-TGACAGATGA-T 939
||| |||||||| || ||||| ||||| ||| ||||||| ||||| | |||||||||| |
Sbjct 873 TCTCTTTTTCATCCCCGAATCCCCTCGCTGGCTGGCAAAAATGGG-TATGACAGATGAAT 931
Query 940 TTCGAAACTTCATTGCAAGTTCTTCGTGGATTTGATACTGATATCACCGTTGAGGTTAAT 999
|| ||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||||||
Sbjct 932 TT-GAAACTTCATTACAAGTTCTTCGAGGATTTGAGACTGATATTACCGTTGAAGTTAAT 990
Query 1000 GAAATCAAGAGATCTGTGGCATCATCTGGCAAA-CGTTCTGCAATTCGGTTTGTAGACCT 1058
||||||||||||||||||||||||||| |||| || | || ||||||||||||| ||
Sbjct 991 GAAATCAAGAGATCTGTGGCATCATCTA-CAAAGCGAAATACAGTTCGGTTTGTAGATCT 1049
Query 1059 CAAGCGCAGGAGATACTATTTCCCACTGATGGTTGGTATAGGGCTGCTTGTACTTCAACA 1118
||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1050 CAAACGCAGGAGATACTATTTCCCACTTATGGTTGGTATAGGGTTGCTTGTACTTCAACA 1109
Query 1119 ACTTGGAGGAATTAATGGTGTCTTGTTCTATTCGAGTACAATTTTTGAATCTGCAGGGGT 1178
|||||| ||||||||||||||| | |||||||| |||||||| |||||||||||||| ||
Sbjct 1110 ACTTGGTGGAATTAATGGTGTCCTATTCTATTCCAGTACAATATTTGAATCTGCAGGAGT 1169
Query 1179 GACATCAAGTAATGTGGCGACATTTGGAGTTGGCGTTGTTCAGGTAGTGGCGACTGCAGT 1238
||||| ||||| | || |||||||| || || | | |||||||||| ||||||||| |
Sbjct 1170 TACATCGAGTAACGCAGCAACATTTGGGGTCGGGGCTATTCAGGTAGTAGCGACTGCAAT 1229
Query 1239 AGCGACATGGTTGGTGGATAAATCAGGTCGTCGACTTCTGCTCA-TGATCTCATCCATCG 1297
| | || ||||||||||| ||| |||||||||| |||||||| | | ||||| || | |
Sbjct 1230 ATCCACTTGGTTGGTGGACAAAGCAGGTCGTCGGCTTCTGCTTACT-ATCTCTTCGGTTG 1288
Query 1298 GAATGACGATAAGCCTCGTGATTGTAGCAGTTGCATTT-TATCTTAAGGAATTCATATCA 1356
| |||||||| ||||| || ||||| |||| ||| ||| |||||||||||||| | ||
Sbjct 1289 GGATGACGATTAGCCTTGTAATTGTTGCAGCTGC-TTTCTATCTTAAGGAATTTGTGTCT 1347
Query 1357 CCTGATTCCA-ACATGTACAACATT--CTAAGCATGGTT-TCCGTAGTTGGAGTTGTGGC 1412
|||||||| | ||||||||| || || ||||| || || |||||||||||||||||
Sbjct 1348 CCTGATTC-AGACATGTACAG--TTGGCTGAGCATA-TTGTCAGTAGTTGGAGTTGTGGC 1403
Query 1413 TATGGTTAT-TTCATGTTCTC-TAGG-AATGGGACCAATTCCATGGCTGATTATGTCTGA 1469
|||||| | || | ||||| | || |||||||||||| || ||||| |||||||||||
Sbjct 1404 AATGGTTGTCTT--T-TTCTCATTGGGAATGGGACCAATACCGTGGCTCATTATGTCTGA 1460
Query 1470 GATTCTGCCAGTGAATATAAAGGGTTTAGCCGGAAGTATAGCAACTTT-GCTAAACTGGT 1528
||| || || ||||| |||||||||||||| |||||||| |||||| | || || ||||
Sbjct 1461 GATCCTTCCTGTGAACATAAAGGGTTTAGCTGGAAGTATTGCAACTCTAGCCAAT-TGGT 1519
Query 1529 TCGTGTCATGGTT-AGTGACAATGACTGCAAATATGCTCTTAGCGTGGAGCAGTGGAGGA 1587
|| | || ||||| | | || ||||| |||||| |||| ||||| |||||||||||||||
Sbjct 1520 TCTTTTCTTGGTTGA-TCACCATGACAGCAAATTTGCTGTTAGCCTGGAGCAGTGGAGGA 1578
Query 1588 ACTTTCACTCTATACGCTTTGGTTTGTGGATTCACTGTGGTCTTTGTGAGTCTTTGGGTT 1647
||||||||||| || | |||||||||| |||||| ||||| || |||| ||| ||||||
Sbjct 1579 ACTTTCACTCTGTATGGATTGGTTTGTGCATTCACAGTGGTGTTCGTGACTCTATGGGTT 1638
Query 1648 CCTGAGACTAAAGGCAAAACGCTTGAAGAGA-TTCAAGCTTTGTTCAGATGATCAAA 1703
|||||||| ||||||||||| |||||||| | ||||| | |||||||||||| ||||
Sbjct 1639 CCTGAGACCAAAGGCAAAACTCTTGAAGA-ACTTCAATCCTTGTTCAGATGAACAAA 1694
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93875019150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5