BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472201 Length=1080 Score E Sequences producing significant alignments: (Bits) Value AT1G19740.1 | Symbols: | ATP-dependent protease La (LON) domai... 1648 0.0 > AT1G19740.1 | Symbols: | ATP-dependent protease La (LON) domain protein | chr1:6824322-6825459 FORWARD LENGTH=1138 Length=1138 Score = 1648 bits (892), Expect = 0.0 Identities = 1028/1091 (94%), Gaps = 19/1091 (2%) Strand=Plus/Plus Query 1 TAAAATCTTAAATCAATTTCGCCCTTCACTTGTGAAATCTCTCCTCCTTCACTCTCTCTA 60 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 15 TAAAATCTTAAATCAATTTCGCCGTTCACTTGTGAAACCTCTCCTCCTTCACTCTCTCTA 74 Query 61 ATGGCGCTTCCAAGCACAGTCTCATCTCCTTCCTTCAAATCAACTCCGCCGTATCTCTCC 120 ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 75 ATGGCGCTTCCAAGCACTGTCTCATCTCCTTCCTTCAAATCAACTCCACCTTATCTCTCC 134 Query 121 GCCTTCAATCCTAAACCTCTACACCTCCCAGCTACTTACCGGAGCATCAACCGTCGAAGC 180 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 135 GCCTTCAACCCTAAACCTCTACATCTTCCAGCTACTTACCGGAGCATCAACCGTCGAAGC 194 Query 181 TGTAAACTCCTCTCCTTCCGATGCTCTTCCTCCTCCTTCTCCGAGAAGCA-C-C-ACAAC 237 |||||||||||||||||||| ||||| ||||| |||||||||||||| || | | ||||| Sbjct 195 TGTAAACTCCTCTCCTTCCGTTGCTCATCCTCTTCCTTCTCCGAGAAACACCACAACAAC 254 Query 238 GCGAATCCGCCGAAATCAGATGACCTAGTCGAGCTTCCTCTCTTCCCACTACCTCTCGTT 297 |||||||| || |||||||||||| |||||||||||||||| || ||||||||||||||| Sbjct 255 GCGAATCCACCCAAATCAGATGACTTAGTCGAGCTTCCTCTATTTCCACTACCTCTCGTT 314 Query 298 CTCTTCCCCGGCGCTACAATCCCGCTTCAGATCTTCGAGTTCCGTTACCGAGTCATGATG 357 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 315 CTCTTCCCAGGCGCAACAATCCCGCTTCAGATCTTCGAGTTTCGTTACCGAGTCATGATG 374 Query 358 CAAACGCTTCTCCAATCCGATCTCAGATTCGGCGTAGTCTACTCCGACGCCGTTTCAGGC 417 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 375 CAAACGCTTCTCCAATCCGATCTCAGATTCGGCGTTGTCTACTCCGACGCTGTTTCAGGC 434 Query 418 TCCGCAGCTGGAATCGGATGCGTCGGAGAAATCGTGAAGCACGAGCGTCTCGTCGACGAT 477 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 435 TCCGCAGCTGGAATCGGATGCGTCGGAGAAATCGTGAAACACGAGCGTCTAGTCGACGAT 494 Query 478 CGATTCTTCTTAATCTGTAAAGGTCAGGAACGATTCCGAGTCACGGATCTAGTCCGTACG 537 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 495 CGATTCTTCTTAATCTGTAAAGGTCAGGAACGATTCCGAGTCACCGATCTCGTCCGTACG 554 Query 538 AAACCTTACCTCGTCGCGAAAGTGACGTGGCTTGAAGATCGACCGTCCGGTGAAGAGAAT 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 AAACCTTACCTCGTCGCGAAAGTGACGTGGCTTGAAGATCGACCGTCCGGTGAAGAGAAT 614 Query 598 CTGGACGAATTAGCGAATGAGGTTGAGGTTTTGATGAAAGAAGTGATTCGATTGTCGAAT 657 ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 615 CTGGACGAATTGGCGAATGAAGTTGAGGTTCTGATGAAAGAAGTGATTCGATTGTCGAAT 674 Query 658 AGATTGAATGGGAAACCAGATAAGGAATCTCAGGATCTGAGGAAGAATCAGTTCCCGACT 717 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 675 AGATTGAATGGGAAACCAGATAAGGAATCTCAGGATCTGAGGAAGAATCAGTTTCCGACT 734 Query 718 CCGTTTTCGTTCTTCGTCGGAAGCACGTTTGAAGGAGCTCCGATGGAGCAGCAAGCGTTG 777 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 CCGTTCTCGTTCTTCGTCGGAAGCACGTTTGAAGGAGCTCCGATGGAGCAGCAAGCGTTA 794 Query 778 CTGGAGCTTGAAGACACGGCGGCTAGGTTAAAGAGAGAGAGGGAGACGCTGAGGAATACA 837 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 795 CTGGAGCTTGAAGATACGGCGGCTAGGTTAAAGAGAGAGAGGGAGACGCTGAGGAATACA 854 Query 838 CTCAATTACTTGACCGCAGCTTCTGCAGTGAAAGATGTGTTCCCATCGCAGCCATAGTTA 897 |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 855 CTCAATTATTTGACGGCAGCTTCTGCTGTGAAAGATGTGTTCCCATCGCAGCCATAGTTT 914 Query 898 AATCGGTATTTAGAAAATTTCTT--GGTCTCTC-TTTCAGCGTTTTCAGTTATT---GGA 951 |||||||||||||| | |||||| |||||| | |||| | ||||||||||||| ||| Sbjct 915 AATCGGTATTTAGATA-TTTCTTCTGGTCTC-CGTTTCGGTGTTTTCAGTTATTATTGGA 972 Query 952 TACATTATATTTGATCAATGTGTAAAGTTTCAGAAACTTAGGTAATAGATGGTGGAGATG 1011 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 973 TACATTATATTTGATCAATGTGTAAAGTTTCAGAAACTTAGGTAATAGATAGTGGAGATG 1032 Query 1012 T-TT-CATAGGATCGTTTATAGTTGGATTGATCAAGAAAAAGGTTTTTACTTGATTGCCT 1069 | || ||||||||||||| | | ||||||||||||| ||||||||||||||||||| Sbjct 1033 TGTTTCATAGGATCGTTT---G--G-ATTGATCAAGAAATGGGTTTTTACTTGATTGCCT 1086 Query 1070 CTGTGATAAAA 1080 || |||||||| Sbjct 1087 CTATGATAAAA 1097 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52911374430 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5