BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472218
Length=1602
Score E
Sequences producing significant alignments: (Bits) Value
AT1G19940.1 | Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5 ... 2518 0.0
AT1G75680.1 | Symbols: AtGH9B7, GH9B7 | glycosyl hydrolase 9B7 ... 1009 0.0
> AT1G19940.1 | Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5
| chr1:6918191-6920377 REVERSE LENGTH=1789
Length=1789
Score = 2518 bits (1363), Expect = 0.0
Identities = 1511/1583 (95%), Gaps = 7/1583 (0%)
Strand=Plus/Plus
Query 1 ATGGTGGCGAAACCAAGGTCAAGATGTTGTTGTTGTAGTTG-GTTCATCGGCATTATCGT 59
|||||||||||||||||||||||||||||||||||||| || |||||||||| ||||| |
Sbjct 110 ATGGTGGCGAAACCAAGGTCAAGATGTTGTTGTTGTAG-TGTGTTCATCGGCGTTATCAT 168
Query 60 GTTAGTCGCTGTAATTC-TGGCGGTCATTTTCACATTCAGGCATAGATCAAGCCACTCCG 118
||| ||||| ||| || | || |||||||||||| |||| |||||||||| ||||||||
Sbjct 169 CTTAATCGCTATAA-TCATCGCTGTCATTTTCACAATCAGACATAGATCAAACCACTCCG 227
Query 119 ATGATAATCCTGGCTCCATTGATAAAAATTACGCTAATGCTCTCAAGATCGCTATGCAAT 178
||||| | |||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct 228 ATGATGA---TGGCTCCAATGTTAAAAACTACGCTAATGCTCTCAAGATCGCTATGCAAT 284
Query 179 TCTTCGATATCCAGAAATCTGGTAAGCTGGAGAACAACAAGATATCATGGAGAGGAGATT 238
|||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct 285 TCTTCGATATCCAGAAATCTGGTAAGCTTGAAAACAACGAGATATCATGGAGAGGAGATT 344
Query 239 CAGGTCTTAAAGATGGAAGCGAAGCAAGTATCGACCTTTCGAAAGGTTTATACGATGCAG 298
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 345 CAGGTCTTAAAGATGGAAGCGAAGCAAGTATCGATCTTTCGAAAGGTTTGTACGATGCTG 404
Query 299 GAGACCACATGAAGTTTGGTTTCCCAATGGCTTTCACTGCCACAGTTCTCTCATGGTCTA 358
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 405 GAGATCACATGAAGTTTGGTTTCCCAATGGCTTTCACTGCTACAGTTCTCTCATGGTCCA 464
Query 359 TTCTTGAGTACGGTGATCAAATGGCTTCTGTGAACCTATTGGATCATGCTAAAGACTCTC 418
||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 465 TTCTTGAATACGGTGATCAAATGGCTTCTCTGAACTTACTGGATCATGCTAAAGACTCTC 524
Query 419 TCAAATGGACTACTGATTTCCTCATCAATGCTCATCCTTCTCCAAATGTCCTCTATATTC 478
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 525 TCAAATGGACTACTGATTTTCTCATCAATGCTCATCCTTCTCCAAATGTCCTCTATATTC 584
Query 479 AGGTGGGAGATCCGGTGACGGATCATAAATGTTGGGATAGGCCAGAAACAATGACAAGGA 538
||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |
Sbjct 585 AGGTGGGAGATCCAGTGACGGATCATAAATGTTGGGATAGACCAGAAACAATGACTAGAA 644
Query 539 AGAGAACTCTTACTAAGATTGATACAGAGACTCCAGGGACTGAGGTTGCTGCAGAGACAG 598
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 645 AGAGAACTCTTACTAAGATTGATACAAAGACTCCAGGGACTGAGGTTGCTGCAGAGACAG 704
Query 599 CAGCAGCTATGGCTGCAGCATCTTTAGTATTCAAAGAAAGTGATACCAAGTATTCAAGCA 658
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 705 CAGCAGCTATGGCTGCAGCATCTTTAGTCTTTAAAGAAAGTGATACCAAGTATTCAAGCA 764
Query 659 CGCTTCTGAAACATGCAAAGCAGTTGTTCGATTTTGCGGATAATAACAAAGGTTCTTACA 718
||||| |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 765 CGCTTTTGAAACATGCGAAGCAGTTGTTCGATTTTGCGGATAATAACAGAGGATCTTACA 824
Query 719 GTGCTAATATACCCGAGGTTCAGCCTTATTATAACTCAACTGGATATGGAGATGAGCTTC 778
||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 825 GTGTTAATATACCTGAGGTTCAGTCTTATTATAACTCAACTGGTTATGGAGATGAGCTTC 884
Query 779 TTTGGGCAGCTTCATGGTTGTACCATGCAACAGAGGATAAAACATATCTTGACTTTGTGT 838
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 885 TTTGGGCAGCTTCATGGTTGTACCATGCAACAGAGGATCAAACATATCTTGACTTTGTGT 944
Query 839 CGGAAAACGGTGAAGAGTTTGGTAATTTTGGAAGTCCATCATGGTTTAGTTGGGACAACA 898
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 CGGAAAATGGTGAAGAGTTTGGTAATTTTGGAAGTCCATCATGGTTTAGTTGGGACAACA 1004
Query 899 AGCTTCCAGGAACACATATACTATTATCAAGATTAACCTTCTTCAAAAAAGGGTTATCAG 958
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1005 AGCTTCCAGGAACACATATACTATTATCAAGATTAACCTTTTTCAAAAAAGGGTTATCAG 1064
Query 959 GAAGCCAAGGACTTCAAGGTTATAAAGAAACAGCAGAAGCTGTCATGTGTGGGCTTATAC 1018
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1065 GAAGCAAAGGACTTCAAGGTTTTAAAGAAACAGCAGAAGCTGTCATGTGTGGGCTTATAC 1124
Query 1019 CAAGCTCACCAACAGCTACATCTAGTAGAACTGATGGTGGTCTAATATGGGTAAGTGAAT 1078
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1125 CAAGCTCACCAACTGCTACATCTAGTAGAACCGATGGTGGTCTAATATGGGTAAGTGAAT 1184
Query 1079 GGAATGCACTGCAACACCCTGTGTCCTCTGCATTTTTAGCTACACTCTACAGTGACTATA 1138
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1185 GGAATGCCCTGCAACACCCTGTGTCCTCTGCATTTCTAGCTACACTCTACAGTGACTATA 1244
Query 1139 TGCTCACCTCTGGTATTAAGGAACTATCTTGCAGTGACCAATCCTTTAAACCTTCAGATC 1198
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 TGCTCACCTCTGGTGTTAAGGAACTATCTTGCAGTGACCAATCCTTTAAACCTTCAGATC 1304
Query 1199 TCAGAAAATTCGCTAGATCTCAGGCTGATTACATGTTAGGGAAAAATCCGGAGAAAATGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1305 TCAGAAAATTCGCTAGATCTCAGGCTGATTACATGTTAGGGAAAAATCCGGAGAAAATGA 1364
Query 1259 GTTATTTGGTGGGATATGGTGAAAAATATCCAGAATTTGTGCATCATAGAGGAGCTTCAA 1318
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1365 GCTATTTGGTGGGATATGGTGAGAAATATCCAGAATTTGTGCATCATAGAGGAGCTTCAA 1424
Query 1319 TACCAGCTGATGCAAACACAGGATGCAAAGATGGGTTTAAGTGGCTTAACTCGGAGGAAC 1378
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1425 TACCAGCTGATGCAACCACAGGATGCAAAGATGGGTTTAAGTGGCTTAACTCGGATGAAC 1484
Query 1379 CAAACCCGAACGTAGCTTATGGTGCACTTGTTGGTGGACCGTTTTTGAACGACACGTTTA 1438
|||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1485 CAAATCCGAATGTAGCTTATGGAGCACTTGTTGGTGGACCGTTTTTGAATGACACGTTTA 1544
Query 1439 TAGACGCAAGGAACAATTCTATGCAAAATGAGCCAAGCACTTATAACAGTGCTCTTGTCG 1498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1545 TAGACGCAAGGAACAATTCTATGCAAAATGAGCCAAGCACTTATAACAGTGCTCTTGTTG 1604
Query 1499 TTGGTCTTTTGTCGAGTTTGGTTACTACGTCTTCCTCATTAGAATCTTTTTAAATGAGAT 1558
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1605 TTGGTCTTTTGTCGAGTTTGGTTACTACTTCTTCCTCGGTAGAATCTTTTTAAATGAGAT 1664
Query 1559 TTTTATTAATTAGAATcacacac 1581
|||||||||||||||||||||||
Sbjct 1665 TTTTATTAATTAGAATCACACAC 1687
> AT1G75680.1 | Symbols: AtGH9B7, GH9B7 | glycosyl hydrolase 9B7
| chr1:28417052-28419529 REVERSE LENGTH=2039
Length=2039
Score = 1009 bits (546), Expect = 0.0
Identities = 1156/1443 (80%), Gaps = 72/1443 (5%)
Strand=Plus/Plus
Query 126 TCCTGGCTCCATTGATAA-AAATTACGCTAATGCTCTCAAGATCGCTATGCAATTCTTCG 184
||| ||| |||||||||| ||| ||||| | ||||| ||| ||||| |||| |||||||
Sbjct 448 TCCCGGCGCCATTGATAAGAAA-TACGCCGACGCTCTTAAGCTCGCTTTGCAGTTCTTCG 506
Query 185 ATATCCAGAAATCTGGTAAGCTGGAGAACAACAAGATATCATGGAGAGGAGATTCAGGTC 244
||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||||
Sbjct 507 ATATCCAGAAATCTGGTAAATTGGAGAACAATAAGATACCTTGGAGAGGAGATTCAGGTC 566
Query 245 TTAAAGATGGAAGCGAAGCA-AGTATCGACCTTTCGAAAGGTTTATACGATGCAGGAGAC 303
||||||||||||| |||| | | | | || ||||| ||||| ||||| ||||| |||||
Sbjct 567 TTAAAGATGGAAGTGAAG-ATAATCTGGATCTTTCCAAAGGCTTATATGATGCTGGAGAT 625
Query 304 CACATGAAGTTTGGTTTCCCAATGGCTTTCACTGCCACAGTTCTCTCATGGTCTATTCTT 363
|| || ||||||||||| ||||||||||||||||| |||||| | |||||||| ||||||
Sbjct 626 CATATAAAGTTTGGTTTTCCAATGGCTTTCACTGCTACAGTTTTGTCATGGTCGATTCTT 685
Query 364 GAGTACGGTGATCAAATGGCTTCTGTGAACCTATTGGATCATGCTAAAGACTCTCTCAAA 423
||||| |||||||||||| | | ||||||| |||||||| ||||||||||||||||
Sbjct 686 GAGTATGGTGATCAAATGAATGCAGTGAACCAATTGGATCCTGCTAAAGACTCTCTCCGG 745
Query 424 TGGACT-ACTGA-TTTCCTCATCAATGCTCATCCTTCTCCA-AATGTCCTCTATATTCAG 480
|||| | ||||| | | || ||||| |||||||||||| | |||||||||||||| |||
Sbjct 746 TGGA-TCACTGACTAT-CTTATCAAAGCTCATCCTTCT-GACAATGTCCTCTATATCCAG 802
Query 481 GTGGGAGATCCGGTGACG--GATCATAAATGTTGGGATAGGCCAGAAACA-ATGACAAG- 536
||||||||||| | | |||||| ||| ||||| || |||| | | |||| |||
Sbjct 803 GTGGGAGATCC--AAAAGTAGATCATCCATGCTGGGAGAGACCAG-AGGATATGA-AAGA 858
Query 537 GAAGAGAACTCTTACTAAGATTGATACAGAGACTCCAGGGACTGAGGTTGCTGCAGAGAC 596
||||||| | |||||||| |||||| ||| ||||||||||| ||||||||||| || ||
Sbjct 859 GAAGAGACCACTTACTAAAATTGATGTAGATACTCCAGGGACAGAGGTTGCTGCTGAAAC 918
Query 597 AGCAGCAGCTATGGCTGCAGCATCTTTAGTATTCAAAGAAAGTGATACC-A-AGTATTCA 654
|| |||||||||||| |||| ||||| || || || || |||||| || | | |||||
Sbjct 919 TGCTGCAGCTATGGCTTCAGCGTCTTTGGTGTTTAAGGATAGTGAT-CCTACA-TATTC- 975
Query 655 AGC-ACGCTTCTGAAACATGCAAAGCAGTTGTTCGATTTTGCGGATA-ATAACAAAGGTT 712
||| ||||||||||||||||| ||||||||||| ||||||| |||| | || | ||| |
Sbjct 976 AGCAACGCTTCTGAAACATGCGAAGCAGTTGTTTAATTTTGCAGATACA-AAGAGAGGCT 1034
Query 713 CTTACAGTGCTAATATACCCGAGGTTCAG-CCTTATTATAACTCAACTGGATATGGAGAT 771
||||||||| ||| ||||| ||||||||| || ||| || || ||||||||||| |||
Sbjct 1035 CTTACAGTGTTAACATACCTGAGGTTCAGAAGTT-TTACAATTCGACTGGATATGGTGAT 1093
Query 772 GAGCTTCTTTGGGCAGCTTCATGGTTGTACCATGCAACAGAGGATAAAACATATCTTGAC 831
||||| || ||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct 1094 GAGCTACTATGGGCAGCTAGTTGGTTGTATCATGCAACAGAGGATAAAACTTACCTTGA- 1152
Query 832 TT-TGTGTCGGAA-AACGGTGAAGAGTTTGGTAATTTTGGAAGTCCAT-CATGGTTTAGT 888
|| |||||| || | || |||| |||| || |||||||| ||| | | |||||||||
Sbjct 1153 TTATGTGTC-TAATCATGGAAAAGAATTTGCTAGTTTTGGAAATCC-TACTTGGTTTAGT 1210
Query 889 TGGGACAACAAGCTTCCAGGAACACATATACTATTATCAAGATTAAC-CTTCTTCAAAAA 947
||||||||||||||| |||||||||| |||||||||||||||| || |||||| || ||
Sbjct 1211 TGGGACAACAAGCTTGCAGGAACACAGGTACTATTATCAAGATT-ACTCTTCTTTAAGAA 1269
Query 948 AGGGTTATCAGGAAGCCAA-GGACTT-CAAGGTTATAAAGAA-ACAGC-AGAAGCTGTCA 1003
|| ||||||||||| ||| |||||| || ||| | ||| ||||| | |||||||||
Sbjct 1270 AGATTTATCAGGAAG-CAAGGGACTTGGAA-ATTA-CAGGAACACAGCTA-AAGCTGTCA 1325
Query 1004 TGTGTGGGCTTATACC-AAGCTCACCAACAGCTACATCTAGTAGAACTGATGGTGGTCTA 1062
||||||| ||| |||| ||| || |||||| ||||| |||||||||| | ||||||||
Sbjct 1326 TGTGTGGACTTCTACCAAAG-TCTCCAACATCTACAGCTAGTAGAACAAACGGTGGTCTT 1384
Query 1063 ATATGGGTAAGTGAATGGAA-TGC-ACTGCAAC-ACCCTGTGTCCTCTGCATTTTTAG-C 1118
|||||||| ||||||||||| | | | |||||| | || || || || || ||||||| |
Sbjct 1385 ATATGGGTTAGTGAATGGAACT-CGA-TGCAACAATCC-GTTTCGTCAGCGTTTTTAGCC 1441
Query 1119 TACACTCTACAGTGACTATATGCTCACCTCTGGTATTAAGGAACTATCTTGC-A-GTGAC 1176
| | || | |||||| || |||||||| || |||| | || |||||||| | | ||
Sbjct 1442 T-CGCTTTTCAGTGATTACATGCTCACTTCCCGTATCCATAAAATATCTTGCGACGGGA- 1499
Query 1177 CAATCCTTTAAACCTTCAGATCTCAGAAAATTCGCTAGATCTCAGGCTGATTACATGTTA 1236
||| ||| ||| | |||| || ||| | ||||| | ||| ||||||||||||||| |
Sbjct 1500 AAAT-CTTCAAAGCAACAGAGCTTAGAGATTTCGCCAAATCGCAGGCTGATTACATGCTG 1558
Query 1237 GGGAAAAATCCGGAGAAAATGAG-TTATTTGGTGGGATATGGTGAAAAATATCCAGAATT 1295
||||| |||||| | || ||| || ||||||| ||||| || ||||| ||| ||||
Sbjct 1559 GGGAAGAATCCGTTGGGAACGAGCTT-CGTGGTGGGTTATGGAGACAAATACCCACAATT 1617
Query 1296 TGTGCATCATAGAGGAGCTTCAATACCAGCTGATGCAAACA-CAGGATGCAAAGATGGGT 1354
||||||||||||||||||||| || || || ||||||| || | || ||| |||||| |
Sbjct 1618 TGTGCATCATAGAGGAGCTTCGATCCCGGCAGATGCAA-CAACGGGTTGCTTAGATGGAT 1676
Query 1355 TTAAGTGGCTTAACTCGGAGGAA-CCAAACCCGAACGTAGCTTATGGTGCACTTGTTGGT 1413
| || ||| |||||||| | ||| |||||||| ||| |||| ||||||||||| || |||
Sbjct 1677 TCAAATGGTTTAACTCG-ACGAAACCAAACCCAAACATAGCATATGGTGCACTCGTAGGT 1735
Query 1414 GGACCGTTT-TTGAACGACACGTTTA-TAGACGCAAG-GAACAATTCTATGCAAAATGAG 1470
||||| ||| || || || ||||| | | ||| || | || || | ||||| || |||
Sbjct 1736 GGACC-TTTCTTCAATGAGACGTTCACT-GACTCACGAGAG-AACCCAATGCAGAACGAG 1792
Query 1471 CCAAGCACTTATAACAGTGCTCTTGTCGTTGGTCTTTTGTCGAGT-TTGGTTACTACGTC 1529
|||| |||||| |||| ||| || |||||||||| ||||| ||| ||| | ||||| ||
Sbjct 1793 CCAACCACTTACAACAATGCACTCCTCGTTGGTCTCTTGTCTAGTCTTG-TCACTACATC 1851
Query 1530 TTC 1532
|||
Sbjct 1852 TTC 1854
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79116058920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5