BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472225 Length=426 Score E Sequences producing significant alignments: (Bits) Value AT1G20000.1 | Symbols: TAF11b | TBP-associated factor 11B | chr... 527 3e-149 > AT1G20000.1 | Symbols: TAF11b | TBP-associated factor 11B | chr1:6936898-6937666 REVERSE LENGTH=615 Length=615 Score = 527 bits (285), Expect = 3e-149 Identities = 315/330 (95%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 97 GCCAACAAGATGCAGACCATTTTATCACAATTTACAGAGGATCAAATGAGCAGATATGAA 156 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 286 GCCAACAAGATGCAGAAGATTTTATCACAATTTACAGAGGAACAAATGAGCAGATATGAA 345 Query 157 TCTTTCAGGAGATCTGCTTTTAAAAAATCAGACATGGAGAAGTTAGTACAGAGAATCACA 216 |||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||| Sbjct 346 TCTTTCAGAAGATCTGGTTTTAAGAAATCAGACATGGAGAAGTTGGTACAGAGAATCACA 405 Query 217 GGGGGTCCGAAGATCGACGACACTATGAATATCGTTGTGCGTGGTATCACAAAGATGTTT 276 |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 406 GGGGGTCCGAAGATGGACGACACTATGAACATCGTTGTGCGTGGTATCGCAAAGATGTTT 465 Query 277 GTTGGTGACCTTGTGGAAACAGCTCGAGTTGTTATGAGGGAAAGGAAAGAATCAGGACCT 336 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 466 GTTGGCGACCTTGTGGAAACAGCTCGAGTTGTTATGAGGGAAAGGAAGGAATCAGGACCT 525 Query 337 ATTAGACCTTGCCATATCAGAGAGTCCTATCGAAGACTAAAGCTCCAAGGAAAAGTGCCT 396 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 526 ATTAGACCTTGCCATATCAGAGAGTCATATCGAAGACTAAAGCTCCAAGGAAAAGTGCCT 585 Query 397 CAGAGATCAGTTCAACGGCTTTTCCGCTAG 426 || |||||||||||||||||||| |||||| Sbjct 586 CAAAGATCAGTTCAACGGCTTTTTCGCTAG 615 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20207635098 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5