BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472283 Length=1260 Score E Sequences producing significant alignments: (Bits) Value AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfami... 2109 0.0 AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein) h... 1201 0.0 AT1G20550.1 | Symbols: | O-fucosyltransferase family protein |... 185 7e-46 > AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:7112611-7115362 FORWARD LENGTH=1268 Length=1268 Score = 2109 bits (1142), Expect = 0.0 Identities = 1223/1262 (97%), Gaps = 6/1262 (0%) Strand=Plus/Plus Query 1 TCTACCTGAATCAGTGCGTC-GGCTCAGGCGACAATGCAAGGAGGATCGTCGGGAATCGG 59 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||| || || Sbjct 8 TCTACCTGAATCAGTGCGTCTGGCTCAGGTGACAATGCAAGGAGGATCATCGGGTATTGG 67 Query 60 ATACGGTTTGAAGTATCAGGCTAGATGTATATCGGATGTGAAAGCAGATACGGATTACAC 119 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 68 ATACGGTTTGAAGTATCAGTCTAGATGTATATCGGATGTGAAAGCCGATACGGATTACAC 127 Query 120 AAGCTTTCTCACTGGAACT-TTAAGTTTGAAAGAAGAAAATGAGGTTCATCTTCTTCGTT 178 ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct 128 AAGCTTTCTCACTGGAACTCTT-AGTTTAAAAGAAGAAAATGAGGTTCATCTTCTTCGTT 186 Query 179 TGTCATCTGGTGGATCTGAGCTTATATGTGAGGGTTTGTTCTCTCATCCTAATGAGATTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 187 TGTCATCTGGTGGATCTGAGCTTATATGTGAGGGTTTGTTCTCTCATCCTAATGAGATTT 246 Query 239 GGGACCTTGCTTCTTGCCCTTTCGATCAACGCATTTTCTCTACTGTCTTCTCCACTGGTG 298 |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct 247 GGGACCTTGCTTCTTGCCCTTTTGATCAACGCATTTTCTCCACCGTCTTCTCCACTGGTG 306 Query 299 AATCATTTGGAGCAGCGATTTGGCAAATTCCTGAGTTATATGGTCAATTGAATTCTCCAC 358 |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 307 AATCGTTTGGAGCAGCGATATGGCAAATTCCTGAGTTATATGGTCAACTGAATTCTCCAC 366 Query 359 AATTGGAGCGTGTTGCATCTCTTGATGCACATGTTGGTAAGATTAATTGTGTTCTTTGGT 418 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 367 AATTGGAGCGTGTTGCTTCTCTTGATGCTCATGTTGGTAAGATTAATTGTGTTCTTTGGT 426 Query 419 GGCCTTCTGGAAGATGTGACAAGTTAATCAGCATTGATGAACAAAATATTTTCTTGTGGA 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 GGCCTTCTGGAAGATGTGACAAGTTAATCAGCATTGATGAACAAAATATTTTCTTGTGGA 486 Query 479 GCTTAGACTGTTCGAAAAAGTCTGCTGAGGTTCTATCTAAGGATTCAGCTGGGATGTTGC 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 GCTTAGACTGTTCGAAAAAGTCTGCTGAGGTTCTATCTAAGGATTCAGCTGGGATGTTGC 546 Query 539 ATTCTTTATCTGGTGGAGCATGGGATCCACATGATGTAAATGCTGTTGCAGCAACTGGTG 598 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 547 ATTCTTTATCTGGTGGAGCATGGGATCCACATGATGTAAATGCTGTTGCAGCAACGGGTG 606 Query 599 AATCATCTGTCCAGTTCTGGGACTTGCGTACTATGAAGAAGGTTAACTCAATTGAACATG 658 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 AATCATCTGTTCAGTTCTGGGACTTGCGTACTATGAAGAAGGTTAACTCAATTGAACATG 666 Query 659 CTCATGTACGCGGTGTTGACTACAATCCCAAGAGAGAACATATACTTGTGACTGCAGAGG 718 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 667 CTCATGTACGCGGTGTTGATTACAATCCCAAGAGAGAACATATACTTGTAACTGCAGAGG 726 Query 719 ATGAATCTGGCATACATGTCTGGGATCTCCGGAAGGCCAAGGTTCCTGTCCAAGAGCTTC 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 727 ATGAATCTGGCATACATGTCTGGGATCTCCGGAAGGCCAAGGTTCCTGTCCAAGAGCTTC 786 Query 779 CTGGTCATACACATTGGACATGGGCTGTCAAGTGTAACCCTGAGTATGATGGACTGATTC 838 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 787 CTGGTCATACACATTGGACTTGGGCTGTCAGGTGTAACCCTGAGTATGATGGACTGATTC 846 Query 839 TGAGCGCTGGAACAGATTCGGCTGTCAACCTGTGGTTTGCTTCAGCATCACCCAGTGATG 898 ||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||| Sbjct 847 TGAGCGCTGGAACAGATTCGGTTGTCAACCTGTGGTATGCTTCAGCAACATCCAGTGATG 906 Query 899 ACAAAACCTCAGAAAGTCCTGTGGAATCCACACGACAGCGTGTGAACCCGTTGCTTAACT 958 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 907 ACAAAACCTCAGAAAGTCCTGTGGAATCCACACGACAGCGTGTGAACCCGTTGCTCAACT 966 Query 959 CATACACTGACTATGAAGACAGTGTCTATGGCCTTGCTTGGAGTTCACGTGAGCCTTGGG 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 967 CATACACTGACTATGAAGACAGTGTCTATGGCCTTGCTTGGAGTTCACGTGAGCCTTGGG 1026 Query 1019 TTTTTGCATCATTATCATATGACGGAAGAGTCGTCATCGAATCCGTCAAGCCTTTCCTTC 1078 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1027 TTTTTGCATCATTATCATATGACGGAAGAGTCATCATCGAATCCGTCAAGCCTTTCCTTC 1086 Query 1079 CAAGAATATAGTAAAAACTCAGCATCTCTTTTGCTCTGACCCAGACACGACCCATCTTTT 1138 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1087 CAAGAATATAGTAAAAACCCAGCATCTCTTTTGCTCTGACCCAGACACGACCCATCTTTT 1146 Query 1139 GGTAAAGAAGTTGGCACTATTGTATTTGAAGCAATGTACTTTTGACACAATCTTTGTGGA 1198 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1147 GGTAAAG---TTGGCACTATTGTATTTGAAACAATGTACTTTTGACACAATCTTTGTGGA 1203 Query 1199 TCATGATGTATCTATCTATCATTCACCCAGATTCTTTCGGTACCAATATTCAGTTGCTTT 1258 || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| Sbjct 1204 TCCTGATGTATCTATCTATCATTCACCAAGATTCTATCGGTATCAATATTCAGTTGCTTT 1263 Query 1259 GA 1260 || Sbjct 1264 GA 1265 > AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 | chr1:28610265-28613263 FORWARD LENGTH=1416 Length=1416 Score = 1201 bits (650), Expect = 0.0 Identities = 933/1068 (87%), Gaps = 25/1068 (2%) Strand=Plus/Plus Query 33 AATGCAAGGAGGATCGTCGGGAATCGGATACGGTTTGAAGTATCAGGCTAGATGTATATC 92 ||||||||||||||| ||||| || || || ||||||||||||||||| ||||||||||| Sbjct 98 AATGCAAGGAGGATCATCGGGTATTGGTTATGGTTTGAAGTATCAGGCCAGATGTATATC 157 Query 93 GGATGTGAAAGCAGATACG-GATTACACAAGCTTTCTCACTGGAACTTTAAGTTTGAAAG 151 |||||| |||||||||| | ||| |||| ||||| ||||||||||| |||| ||||||| Sbjct 158 GGATGTTAAAGCAGATA-GAGATCACACTAGCTTCCTCACTGGAACCCTAAGCTTGAAAG 216 Query 152 AAGAAAATGAGGTTCATCTT-CTTCGTTTGTCATCTGGTGGATCTGAGCT-TATATGTGA 209 ||||||||||||||||| || ||||||||||| ||||||||||||||||| | ||||||| Sbjct 217 AAGAAAATGAGGTTCAT-TTGCTTCGTTTGTCTTCTGGTGGATCTGAGCTGT-TATGTGA 274 Query 210 GGGTTTGTTCTCTCATCCTAATGAGATTTGGGACCTTGCTTCTTGCCCTTTCGATCAACG 269 ||| |||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||| Sbjct 275 GGGATTGTTCTCGCATCCTAATGAAATTTGGGACCTTGCTTCTTCCCCTTTTGATCAACG 334 Query 270 CATTTTCTCTACTGTCTTCTCCACTGGTGAATCATTTGGAGCAGCGATTTGGCAAATTCC 329 ||||||||||||||||||||||||||| || |||| ||||||||| || ||||| ||||| Sbjct 335 CATTTTCTCTACTGTCTTCTCCACTGGCGACTCATATGGAGCAGCAATATGGCAGATTCC 394 Query 330 TGAGTTATATGGTCAATTGAATTCTCCA-CAATTGGAGCGTGTTGCATCTCTTGATGCAC 388 |||| ||||||||||| ||||||| || || ||||| ||||||| || |||||||||| Sbjct 395 TGAGCCATATGGTCAATCGAATTCTTCAACA-TTGGAATGTGTTGCTTCCCTTGATGCAC 453 Query 389 ATGTTGGTAAGATTAATTGTGTTCTTTGGTGGCCTTCTGGAAGATG-TGACAAGTTAATC 447 ||||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||| Sbjct 454 ATGTTGGTAAGATTAATTGCGTTCTTTGGTGTCCCTCTGGAA-ATTCTGACAAGTTAATC 512 Query 448 AGCATTGATGAACAAAATATTTTCTTGTGGAGCTTAGACTGTTCGAA-AAA-GTCTGCTG 505 ||||| |||||||||||| || |||| ||||| ||||||| ||| || ||| || || | Sbjct 513 AGCATGGATGAACAAAATCTTGTCTTCTGGAGTTTAGACTCTTCAAAGAAAAGT--GCGG 570 Query 506 AGGTTCTATCTAAGGATTCAGCTGGGATGT-TGCATTCTTTATCTGGTGGAGCATGGGAT 564 ||||| |||||||||| |||||||| ||| | |||||||||||||||||||||||| || Sbjct 571 AGGTTTTATCTAAGGAGTCAGCTGGTATGCGT-CATTCTTTATCTGGTGGAGCATGGAAT 629 Query 565 CCACATGATGTAAATGCTGTTGCAGCAACTGGTGAATCATCTGTCCAGTTCTGGGACTTG 624 ||||||||||| ||| |||||||||||||| |||||||||| ||||||| |||||||| Sbjct 630 CCACATGATGTGAATTCTGTTGCAGCAACTTCTGAATCATCTATCCAGTTTTGGGACTTA 689 Query 625 CGTACTATGAAGAAGGTTAACTCAATTGAACATGCTCATGTACGCGGTGTTGACTACAAT 684 ||||||||||||||| ||| |||||||||| ||| |||||||| ||||||||||||| Sbjct 690 CGTACTATGAAGAAGAATAATTCAATTGAACGTGCCCATGTACGTAATGTTGACTACAAT 749 Query 685 CCCAAGAGAGAACATATACTTGTGACTGCAGAGGATGAATCTGGCATACATGTCTGGGAT 744 | |||||||||||||||||| || |||| || ||||||||||| |||||| |||||||| Sbjct 750 CTCAAGAGAGAACATATACTCGTTTCTGCGGATGATGAATCTGGTATACATCTCTGGGAT 809 Query 745 CTCCGGAAGGCCAAGGTTCCTGTCCAAGAGCTTCCTGGTCATACACATTGGACATGGGCT 804 || |||||| | ||| ||||||| |||||||| |||||||||||||| |||||||||||| Sbjct 810 CTTCGGAAGACAAAGTTTCCTGTGCAAGAGCTCCCTGGTCATACACACTGGACATGGGCT 869 Query 805 GTCAAGTGTAACCCTGAGTATGATG-GACTGATTCTGAGCGCTGGAACAGATTCGGCTGT 863 |||| |||||||||||||||||| | | || |||||||||| ||||||||| || ||||| Sbjct 870 GTCAGGTGTAACCCTGAGTATGAAGAG-CTAATTCTGAGCGTTGGAACAGACTCAGCTGT 928 Query 864 CAACCTGTGGTTTGCTTCAGCATCACCCAGTGATG-ACAAAACCTCAGAAAGTCCTGTGG 922 |||| ||||||||||||||||||| ||||| | | ||||| |||||||| || |||| Sbjct 929 CAACTTGTGGTTTGCTTCAGCATCT---AGTGA-GCATAAAACATCAGAAAGCCCGGTGG 984 Query 923 AATCCA-CACGACAGCGTGTGAACCCGTTGCTTAACTCATACACTGACTATGAAGACAGT 981 || | | |||| ||||||||||||||||| || ||||| || |||||||| ||||||||| Sbjct 985 AAGC-ATCACGTCAGCGTGTGAACCCGTTACTAAACTCTTATACTGACTACGAAGACAGT 1043 Query 982 GTCTATGGCCTTGCTTGGAGTTCACGTGAGCCTTGGGTTTTTGCATCATTATCATATGAC 1041 ||||| |||||||||||||| || |||||||||||| ||||||||||||| ||||||||| Sbjct 1044 GTCTACGGCCTTGCTTGGAGCTCGCGTGAGCCTTGGATTTTTGCATCATTGTCATATGAC 1103 Query 1042 GGAAGAGTCGTCATCGAATCCGTCAAGCCTTTCCTTCCAAGAATATAG 1089 || || || || ||||||||||||||||||||||| ||||||| |||| Sbjct 1104 GGTAGGGTTGTGATCGAATCCGTCAAGCCTTTCCTGCCAAGAAGATAG 1151 > AT1G20550.1 | Symbols: | O-fucosyltransferase family protein | chr1:7115241-7118161 REVERSE LENGTH=2164 Length=2164 Score = 185 bits (100), Expect = 7e-46 Identities = 110/115 (96%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1146 AAGTTGGCACTATTGTATTTGAAGCAATGTACTTTTGACACAATCTTTGTGGATCATGAT 1205 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 2160 AAGTTGGCACTATTGTATTTGAAACAATGTACTTTTGACACAATCTTTGTGGATCCTGAT 2101 Query 1206 GTATCTATCTATCATTCACCCAGATTCTTTCGGTACCAATATTCAGTTGCTTTGA 1260 |||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| Sbjct 2100 GTATCTATCTATCATTCACCAAGATTCTATCGGTATCAATATTCAGTTGCTTTGA 2046 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61947472530 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5