BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472287
Length=2946
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20570.1 | Symbols: | Spc97 / Spc98 family of spindle pole ... 4390 0.0
AT1G80260.1 | Symbols: emb1427 | Spc97 / Spc98 family of spindl... 3358 0.0
> AT1G20570.1 | Symbols: | Spc97 / Spc98 family of spindle pole
body (SBP) component | chr1:7122018-7126559 REVERSE LENGTH=2931
Length=2931
Score = 4390 bits (2377), Expect = 0.0
Identities = 2766/2953 (94%), Gaps = 29/2953 (1%)
Strand=Plus/Plus
Query 1 ATGTCCGAGTCGTTGCTTCG-AGTTGATCGCGCTTGCTTAGAAACGCTAATTCCAGGAGC 59
||||| |||||||||||||| | |||||| ||| ||||||| || |||||||| |||
Sbjct 1 ATGTCTGAGTCGTTGCTTCGTA-TTGATCACGCCGGCTTAGACACCCTAATTCCGGGAAT 59
Query 60 GATGTGCAGTCGCAGAGTTTGGACACACTCAGAACTAACTCCTCCTTCAGTGAGCGTGAA 119
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 60 GATGTGCAGTCACAGAGTTTGGACACACTCAGAACTAGCTCCTCCTTCAGTGAGCGTGAA 119
Query 120 TGAATCCGATCTGGTGAAAGGTCTCTTACAAGCTTTGCAAGGTTTCTCTAGTCCCTTCAT 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TGAATCCCATCTGGTGAAAGGTCTCTTACAAGCTTTGCAAGGTTTCTCTAGTCCCTTCAT 179
Query 180 TTTCTGGGACCAAAAGGAACAAACTTTCCGCGCTAAAAGTGAGATACGAGTCTCTCATTT 239
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 180 TTTCTGGGACCGAAAGGAACAAACTTTCCGCGCTAAAAGTGAGATACGAGTTTCTCATTT 239
Query 240 GTCTCAGTCAAGCCTTCATGTCCTTCTCGCTGGATTTTTGTATGCCGCAACATGTTTGAA 299
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 240 GTCTCAGTCAAGCCTTCATGTCCTTCTCGCTGGATTTTTGTATGCTGCTACATGTTTGAA 299
Query 300 GCTTGTGGAGTCTATTGTT-GCTGGAATTAATACCTCTCTTAGATCTCCTCCTACTTTAA 358
||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||
Sbjct 300 GCTTGTGGAGTCTATTGTTAG-TGGAATTAATGCCTCTCTTAAATCTCCTCCTACTTTAA 358
Query 359 TGGGATTTTCGAACTCTGTCTCTGGTTGGCTTGAGGCAAATATTGCTTTGAATGAGGAAG 418
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 359 TGGCATTTTCGAACTCTGCCTCTGGTTGGCTTGAGGCAAATATTGCTTTGAATGAGGAAG 418
Query 419 TGAAGATCAACGATTCTAATGTTGCTGTCACTCCAACTCTCTTGGGATTAACTACTTCTT 478
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct 419 TGAAGATCAACGATTCTAATGTTGCTGTTACTCCAACTCTTTTGGGATTAACTAGTTCTT 478
Query 479 TATCTAGTCTGTGTTCAGGTGCTGAATATCTTTTCCAAGTTGTACGAGGTGCGATCCCTC 538
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 479 TATCTAGTCTGTGTTCAGATGCTGAATACCTTTTCCAAGTTGTACGAGGTGCGATCCCTC 538
Query 539 ATGCGTATTTTGAGTCGAGTTCAGCTATTTCAACCGCTGAAATTGCTGTCCACGTTCTTG 598
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 539 ATGCGTATTTTGAGTCGAGTTCGGCTATTTCAACAGCTGAAATTGCTGTGCACGTTCTTG 598
Query 599 ATTACCTTTACAAGAGGCTGGATGAAGTATGCCTTGTCCAAGGTGGTGAGGTTGTGGCCG 658
||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||
Sbjct 599 ATTACCTTTACAAGAGGCTAGATGAAGTATGTCTTGTACAAGGTGGTGAGCTTGTGGCCG 658
Query 659 TGGAAGGATTTCATGTGCTGCTGCAAATATTTGCTGGAAGTTTATTGCCATATGTAGA-A 717
||||||||||||| || | ||||||| ||||||||||||||||||||||||||||| |
Sbjct 659 TGGAAGGATTTCACATGTTATTGCAAATCTTTGCTGGAAGTTTATTGCCATATGTAGAGA 718
Query 718 GCTTTGGATTCATGGTTATTTGAAGGAACTCTTGATGATCCTTTTGAAGAGTTGtttttt 777
| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct 719 G-TTTGGATTCATGGTTGTTTGAGGGAACTCTTGATGATCCTTTTGAAGAGTTGTTCTTT 777
Query 778 tCAGCCAACCAATCGGTCTCCGTTAGCGATGCAGAGTTTTGGGAGAAAAGCTATCTGTTG 837
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 778 ACAGCCAACCAATCGGTCTCGGTTAGCGATGCAGAGTTTTGGGAGAAAAGCTATCTGTTG 837
Query 838 ACGAGGGTGCTGGGTCCAAAATCAAATGTAACTTCGCTAAATCAAAAGGAAGGAATGAGT 897
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 838 ACGAGGGTGCTGGGTCCAAAATCAAATGTAACTTCGCTAAATCAAAAGAAAGGGATGAGT 897
Query 898 GGAAATGACTCCAATTCAGTTTCTGACAAAGACAAAGAGCAGAATAATCGGGTGTTATGC 957
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 898 GGAAATGACTCCAATTCAGTTTCTGACAAAGACAAAGAGCAGAACAATCGGGTGTTATGC 957
Query 958 CCACTATTCATAAAAGACATCTGTAAGTCGATTGTTTCTGCTGGAAAGTCACTGCAGCTG 1017
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 958 CCACTGTTCATAAAAGACATATGTAAGTCGATTGTTTCTGCTGGAAAGTCACTGCAGCTG 1017
Query 1018 ATGCGGCATATTCCTTCTCCGTCTTCAGAAAAGTGTGGAAAGATTCAGTACCATGGGCAA 1077
|||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |
Sbjct 1018 ATGCAGCATATTCCTTCTACGTCTTCAGAAAATTGTGAAAAGATTCAGTACCATGGGCGA 1077
Query 1078 AATGATTTTGGGAATTCGGGTTGTGGCATACTCCTGGCTGGGAGGAACAGCTTTAGAAGC 1137
|||| |||||||||||| || |||||||||||||||||||| | ||| ||||||||||||
Sbjct 1078 AATGGTTTTGGGAATTCTGGCTGTGGCATACTCCTGGCTGGAAAGAATAGCTTTAGAAGC 1137
Query 1138 ACTGCAGACTTATCCTTGTCTGAAATCTTCTGTCTATCACTTGCTGGCCTCATAGGCCAT 1197
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1138 ATTGCAGACTTATCCTTGTCTGAAATATTCTGTCTATCACTTGCTGGCCTCATAGGCCAT 1197
Query 1198 GGTGATCATGTATCTAGATACCTGTGGAAAGATGAGACAGATGAGTGGGAGATTTCTCCA 1257
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1198 GGTGATCATGTATCTAGATATCTGTGGAAAGATGAGACAGATGAGTGGGAGATTTCTCCT 1257
Query 1258 ACTTTGGCATTATATATAAGTGG-AAGGCTAGTGGATGGCACAGGTGATAGAGATATTTC 1316
||||| |||| |||||||||||| || ||||||| |||||||| | | | | | ||
Sbjct 1258 ACTTTAGCATCATATATAAGTGGTAA-GCTAGTGAATGGCACA-G-G-T---G--A--TC 1306
Query 1317 AGCTCTCACATACTCAGACCGAATGTGGTATAAGTTGTTGGTTGGTGCTGTGCAAGAGAA 1376
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 --TTCTCACATACTCAGAGCGAATGTGGTATAAGTTGTTGGTTGGTGCTGTGCAAGAGAA 1364
Query 1377 AAGATCTATAGAGGCCAAATCAGAACTCCAGAGTCCATGTTATGTTAGTCGTGTTAAAGA 1436
|| ||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct 1365 AAAATCTATAGAAGCCAAATCAGAACTCCAGAGTCCATGTTGTGTTACTTGTGTTAAAGA 1424
Query 1437 CGAGAAAAATGTTCTCGTTGCCGAAAAGGTGTTGCAGCGGTTGTTTTGTCATGAAAACCC 1496
|| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1425 AGAAAAAAATGTTCTCGCTGCCGAAAAGGTGTTGCAGGGGTTGTTTTGTCATGAAAACCT 1484
Query 1497 TGTTGTTTCAGTATCTAAAATGGATCTTGAGAGGAATAAGAATGCATGGAATGTCTTGAA 1556
||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct 1485 TGTTGTTTCAGCATCTAAAATGGATCTTGAGAGGAATAAAAATGCCTGGCATGTCTTGAA 1544
Query 1557 CTTATCACAAAACTATTGCCTACCCTCGT-TAAATGATGAGAGTTTGTTGAGTGCTGTTT 1615
||||||| | |||||||| |||||||| | |||||||| |||||||||||||||||||||
Sbjct 1545 CTTATCAGAGAACTATTGTCTACCCTC-TCTAAATGATAAGAGTTTGTTGAGTGCTGTTT 1603
Query 1616 TTGAGGGATCTGGCGTGGCAGATACAGGA-TTGACCGGAACAAACTACAAATTTGGGTTC 1674
|||||||||||||||| || | || | ||| ||||||||||||||||| ||| |||
Sbjct 1604 TTGAGGGATCTGGCGTTGC--A-CCAAAATTTG-TCGGAACAAACTACAAATATGGATTC 1659
Query 1675 CAATTCGGTAGATCTGAATATCTTTCTAATCAGGATGACACCCAAATTCTAGAAACGTTA 1734
||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||
Sbjct 1660 CAATTCGGTAGATCTGAATATCTTTCTTCTCAAGATGACACCAAAATTCTAGAAACGTTA 1719
Query 1735 TTTCCTTTTCCCACATTACTTCCGTCATTCCAGCCGAAGCTCCATATGTCAGAATTTCTA 1794
||||||||||| ||||| || |||||||||||| |||||||||||||||||||||| |||
Sbjct 1720 TTTCCTTTTCCTACATTGCTGCCGTCATTCCAGTCGAAGCTCCATATGTCAGAATTCCTA 1779
Query 1795 CCTTTCCAAAAGAATAGTACACTTCCTTCCAGAGTTCTCAGCTGGATGCTTAAGG-CAGA 1853
|||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||
Sbjct 1780 CCTTACCAAAAGAATAGTACACTTCCTTCAAGAGTTCTCAGCTGGATACTT-AGGACAGA 1838
Query 1854 GACAAGGGATACTCCACTTCCTGTTGTAATAATGCAAGAATGCTTGACAATCTACATCAG 1913
| ||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1839 GCCAAGGAATACTCTACTTCCTGTTGTAATAATGCAAGAATGCTTCACAATCAACATCAG 1898
Query 1914 GAGGCAGGTGGACGACATTGGCAAAGTGATTTTGTCAAAACTAATGAATGATTGGAAATT 1973
||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1899 GAGGCAGGTGGACAACATTAGCAAAGTGATTTTTTCAAAACTAATGAATGAATGGAAATT 1958
Query 1974 GATGCACGAACTTGCGGTGTTGCGTGCCATTTACTTGTTAGGTTCAGGGGACCTTCTGCA 2033
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1959 GATGCACGAACTTGCGGTGTTGCGTGCCATTTATTTGTTAGGTTCAGGGGACCTTCTGCA 2018
Query 2034 GCATTTTCTGACTGTCATATTCGATAGACTGAGCAAGGGAGAGTCATCAAATGATGATTT 2093
||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 2019 GCATTTTTTGACTGTCATATTTGATAGGCTGGGCAAGGGAGAGTCATCAAATGATGATTT 2078
Query 2094 TGAGTTGAACATAATCCTTCAGGAATCTATTAGAAATTCAGCTGATGCCATGTTGTTAAG 2153
|||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||
Sbjct 2079 TGAGTTGAACATAATCATTCAGGAATCAATTAGAAATTCAGCTGATACCATGTTGTTAAG 2138
Query 2154 CAGTCCTGATGCATTGGTGGTATCTATTTCCAGTGAAGGGTCTTTGGACAGAGACAAAGA 2213
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2139 CAGTCCTGATGCATTGGTGGTATCTATTTCCAGTGAAGGGTGTTTGGACAGAGACAAAGA 2198
Query 2214 TGACAAGGGTGACGTAAAAACCCGTTCTTCAACTCGTAAAAGCCGCGTTAACAATTTTGG 2273
||||||||| ||||||||| ||| ||||||| ||||| ||||| |||||||||||| ||
Sbjct 2199 TGACAAGGGCGACGTAAAATCCCTTTCTTCACCTCGTGAAAGCAGCGTTAACAATTATGC 2258
Query 2274 GATAGATTGCCTTGAGTCTCTCAAATTCACATACAAGGTGCCGTGGCCGCTAGAGCTTAT 2333
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2259 GATAGATTGCCTTGAATCTCTCAAATTCACATACAAGGTGCCGTGGCCGCTTGAGCTTAT 2318
Query 2334 TGCGAACAGCGAGGCCATTAAGAAGTATAACCAGGTCAAACGAGCAAAATATGTGCTTGA 2393
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2319 TGCGAACAGCGAGGCCATTAAGAAGTATAACCAGGTCAAGCGAGCAAAATATGTGCTTGA 2378
Query 2394 TAAAGCACGAAGGTGGATGTGGAAGGGTAAAGGCTCTGCAACAAAAATCCGCAAGCACCA 2453
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379 TAAGGCACGAAGGTTGATGTGGAAGGGTAAAGGCTCTGCAACAAAAATCCGCAAGCACCA 2438
Query 2454 TTGGTTACTGGAACAAAAGCTCCTCAATTTTGTGGATGCTTTTCATCAATACGTAATGGA 2513
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2439 CTGTTTACTGGAACAAAAGCTCCTCAATTTTGTGGATGCTTTTCATCAATACGTAATGGA 2498
Query 2514 CAGGGTATATCACACTGCATGGCGTGAACTGTGCGAAGCTATGGTAAAAGCAGGGTCTCT 2573
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2499 TAGGGTATATCACACTGCTTGGCGTGAGCTGTGCGAAGCTATGGTAAAAGCAGGGTCTCT 2558
Query 2574 AGATGAGGTCATAGATGTACATGAGACGTACTTGTTATCAATTCAGAGGCAATGTTTTGT 2633
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2559 AGATGAGGTCATAGATGTACACGAGACGTACTTGTTATCGATTCAGAGGCAATGTTTTGT 2618
Query 2634 GGTTCAAGAAAAGCTGTGGGTAATCATCGCAAGTCGGATCAACATAATTCTCGGGTTAGC 2693
|||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct 2619 GGTTCAAGAAAAGCTGTGGGCAATCATCGCAAGTCGGATCAACATGATTCTCGGTTTAGC 2678
Query 2694 TCTAGAATTCTACTCAATACAACAGACGCTGAGCAGCGGTGGAGCAGTTTCAGCTATCAA 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2679 TCTAGAATTCTACTCAATACAACAGACGCTGAGCAGCGGTGGAGCAGTTTCAGCTATCAA 2738
Query 2754 GGCTAGATGCGAAATGGAGATAGACCGCATTGAGAAACAATTTGAGGACTGTATTGCATT 2813
||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 2739 GGCTAGATGGGAGATGGAGATAGACCGCATCGAGAAACAATTCGAGGACTGTATTGCTTT 2798
Query 2814 CCTCCTTAGAGTATTGACTTCGAAGCTGAACGTGGGACACTTCCCTCATCTGGCAGATTT 2873
||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||
Sbjct 2799 CCTCCTTAGAGTATTGACTTCGAAGAAGAATGTGGGACACTTCCCTCATCTGGCTGATTT 2858
Query 2874 GGTGACCAGAATCAATTACAATTATCACTACATGTCTGACACTGGAAGCTTAATGACTGT 2933
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2859 GGTGACCAGAATCAATTACAATTATCACTACATGTCTGACACTGGAAGCTCGATGACTGC 2918
Query 2934 TTCTGGATCATAG 2946
|||||||||||||
Sbjct 2919 TTCTGGATCATAG 2931
> AT1G80260.1 | Symbols: emb1427 | Spc97 / Spc98 family of spindle
pole body (SBP) component | chr1:30175785-30180681 FORWARD
LENGTH=3297
Length=3297
Score = 3358 bits (1818), Expect = 0.0
Identities = 2594/2957 (88%), Gaps = 99/2957 (3%)
Strand=Plus/Plus
Query 41 AAACGCTAATTCCAGGAGCGATGTGCAGTCGCAGAGTTTGGACACACTCAGAACTAACTC 100
|||| |||||||| ||||||||||| || |||||||||||||||||||||||||| |||
Sbjct 165 AAACCCTAATTCCGGGAGCGATGTGTAGCCGCAGAGTTTGGACACACTCAGAACTGGCTC 224
Query 101 CTCCTTCAGTGAGCGTGAA-TGAATCCGATCTGGTGAAAGGTCTCTTACAAGCTTTGCAA 159
||| ||||||||||| || ||||| |||||||||| |||||| |||||||||||||||
Sbjct 225 TTCCCTCAGTGAGCGT-AACTGAATTGGATCTGGTGAGAGGTCTATTACAAGCTTTGCAA 283
Query 160 GGTTTCTCTAGTCCCTTCATTTTCTGGGACCAAA-AGGAACAAACTTTCCGCGCTAAAAG 218
||| | |||||||||||| ||||||||||||||| || ||||||||||||||| |||||
Sbjct 284 GGTCTGTCTAGTCCCTTCCTTTTCTGGGACCAAACTGG-ACAAACTTTCCGCGCCAAAAG 342
Query 219 TGAGATACGAGTCTCTCATTTGTCTCAGTCAAGCCTTCATGTCCTTCTCGCTGGATTTTT 278
| | ||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |
Sbjct 343 TCATATACGCGTCTCTCATTTGTCTCACTCAAGCCTTCATGTTCTTCTCGCTGGGTTCCT 402
Query 279 GTATGCCGCAACATGTTTGAAGCTTGTGGAGTCTATTGTTGCTGGAATTAATACCTCTCT 338
|||| |||| ||||||||||| || || |||||||| ||||||| ||||||||||||||
Sbjct 403 GTATCCCGCTACATGTTTGAAACTCGTTGAGTCTATCGTTGCTGCCATTAATACCTCTCT 462
Query 339 TAGATCTCCTCCTACTTTAATGGGATTTTC-GAACTCTGTCTCTGGTTGGCTTGAG-G-- 394
||| ||||||||||| ||||||| ||| || | |||||||||| | ||||||||| |
Sbjct 463 TAGGTCTCCTCCTACCTTAATGGCATTCTCTG-ACTCTGTCTCCGCATGGCTTGAGAGAC 521
Query 395 -CA-A-ATATTGCTTTGAATGAGGAAGTGAAGATCAACGATTCTAATGTTGCTGTCACTC 451
|| | ||||||||||||| |||||||||| |||| || ||||| || || |||| ||||
Sbjct 522 TCAGAGATATTGCTTTGAAAGAGGAAGTGATGATCGACAATTCTGATATTACTGTTACTC 581
Query 452 CAACTCTCTTGGGATTAACTACTTCTTTATCTAGTCTGTGTTCAGGTGCTGAATATCTTT 511
|||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||| |
Sbjct 582 CAACCCTCTTGGGATTAACCAGTTCTTTATCTAGTCTTTGTTCAGGTGCTGAATATCTCT 641
Query 512 TCCAAGTTGTACGA-GGTGCGATCCCTCATGCGTATTTTGAGTCGAGTTC-AGCTATTTC 569
| |||||||||| | ||||| ||||||||| ||| |||||| || | || | | |||||
Sbjct 642 TACAAGTTGTAC-ATGGTGCCATCCCTCATACGTTTTTTGATTCAAACTCTA-CGATTTC 699
Query 570 AACCGCTGAAATTGCTGTCCACGTTCTTGATTACCTTTACAAGAGGCTGGATGAAGTATG 629
| ||||| ||||||||||| ||||||||||| |||||||||| ||| |||||||||||
Sbjct 700 CGCTGCTGAGATTGCTGTCCATGTTCTTGATTATCTTTACAAGAAGCTTGATGAAGTATG 759
Query 630 CCTTGTCCAAGGTGGTGAGGTTGTGGCCGTGGAAGGATTTCATGTGCTGCTGCAAATATT 689
|||||| ||||||||||| | |||||||||||||| ||||| ||||||| ||
Sbjct 760 CCTTGTACAAGGTGGTGA-------G--GTGGAAGGATTTCACATGCTGTTGCAAATGTT 810
Query 690 TGCTGGAAGTTTATTGCCATATGTAGAAGCTTTGGATTCATGGTTATTTGAAGGAACTCT 749
|||||||||||||||||||||| |||| | ||||||||||||||| ||||| ||||||||
Sbjct 811 TGCTGGAAGTTTATTGCCATATATAGAGGGTTTGGATTCATGGTTGTTTGAGGGAACTCT 870
Query 750 TGATGATCCTTTTGAAGAGTTGtttttttCAGCCAACCAATCGGTCTCCGTTAG-CGATG 808
||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||||
Sbjct 871 TGATGATCCTTGTGAAGAGTTGTTTTTTACAGCCAACCAATCGGTCTCCGTT-GACGATG 929
Query 809 CAGAGTTTTGGGAGAAAAGCTATCTGTTGACGAGGGTG-CTGGGTCCAAAATCAAATGTA 867
|||||||||||||||||||||||| ||||| || |||| | | ||||||||||||||
Sbjct 930 CAGAGTTTTGGGAGAAAAGCTATCAGTTGATGAAGGTGCCCAACT-CAAAATCAAATGTA 988
Query 868 ACTTCGCTAAATC-AAAAGGAAGGAATGAGTGGAAATGACTCCAA-T--TC---AGTTTC 920
||||| ||||| | ||||| ||| |||||||||| ||||| |||| | || || |||
Sbjct 989 ACTTCACTAAA-CGAAAAGAAAGTAATGAGTGGACATGACGCCAACTCATCTTTAGCTTC 1047
Query 921 TGACAAAGACAAAGAGCAGAATAATCGGGTGTTATG-CCCACTATTCATAAAAGACATCT 979
|||||||||||||||||| |||| |||||||||||| ||| ||||||| ||||||||||
Sbjct 1048 TGACAAAGACAAAGAGCAAAATACTCGGGTGTTATGTCCC-TTATTCATTAAAGACATCT 1106
Query 980 GTAAGTCGATTGTTTCTGCTGGAAAGTCACTGCAGCTGATGCGGCATATTCCTTCTC-CG 1038
||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| | ||
Sbjct 1107 GTAAGTCTATTGTTTCTGCTGGAAAGTCACTGCAGCTAATGCAGCATATTCCTTC-CACG 1165
Query 1039 TCTTCAGAAAAGTGTGGAAAGATTCAGTACCATGGGCAAAATGATTTTGGG-AAT-TCGG 1096
||||||||||| | |||||||| ||||| |||||||| ||||| || |||| ||| | |
Sbjct 1166 TCTTCAGAAAATTCTGGAAAGACTCAGTTCCATGGGCGAAATGGTTATGGGAAATCTAGC 1225
Query 1097 GTTGTGGCA-TACTCCTGGCTGGGAGGAACAGCTTTAGAAGCACTGCAGACTTATCCTTG 1155
| | ||| | | |||||| || | || ||||| ||| |||||||| ||||||||||||
Sbjct 1226 G-T-TGGTAGT-CTCCTGACTAAAATGAGCAGCTGTAGTAGCACTGCGGACTTATCCTTG 1282
Query 1156 TCTGAAATCTTCTGTCT-ATCACTTGCTGGCCTCATAGGCCATGGTGATCATGTATCTAG 1214
|||||| |||| ||| | | |||| || ||||| |||||||||||||||||||| |||||
Sbjct 1283 TCTGAAGTCTTTTGTTTGA-CACTCGCCGGCCTTATAGGCCATGGTGATCATGTCTCTAG 1341
Query 1215 ATACCTGTGGAAAGATGAGACAGATGAGTGGGAGATTTCTCCAACTTTGGCATTATATAT 1274
||| ||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||
Sbjct 1342 ATATCTGTGGAAAGATGAGGCGGATGAGTGGGAGATTTCTCCAACTTTAGCATCATATAT 1401
Query 1275 AAGTGGAAG-GCTAGTGGATGGCACA-GG-TGATAGAGATATTTCAGCTCTCACATACTC 1331
|||||| || ||| ||| || | ||| || | ||| |||| || ||| |||||||| |||
Sbjct 1402 AAGTGG-AGAGCTTGTGAAT-G-ACATGGATAATAAAGATCTTCCAGTTCTCACATGCTC 1458
Query 1332 AGACCGAATGTGGTATAAGTTGTTGGTTGGTGCTGTGCAAGAGAAAAGATCTATAGAGGC 1391
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||
Sbjct 1459 AGAGCGAATGTGGTATAAGTTGTTGGTCGGTGCTGTGCAAGAGAAAAGAGCTATGGAGGC 1518
Query 1392 CAAATCAGAACTCCAGAGTCCATGTTATGTTAGTCGTGTTAAAGACGAGAAA-AATGTTC 1450
||||||||||||||||||| |||| |||| || ||||||| || | |||| | || ||
Sbjct 1519 CAAATCAGAACTCCAGAGTGCATGCTATGCTACAGGTGTTAAGGATG-GAAATAGTGGTC 1577
Query 1451 TCGTTGCCGAAAAGGTGTTGCAGCGGTTGTTTTGTCATGAAAACCCTGTTGTTTCAGTAT 1510
|| |||| |||||| ||||||| |||| || ||| ||||||||| ||||||||||||||
Sbjct 1578 TCACTGCCCAAAAGGCGTTGCAGGGGTTATTCTGTAATGAAAACCTTGTTGTTTCAGTAT 1637
Query 1511 CTAAAATGGATCTTGAGAGGAATAAG-AATGCATGGAATGTCTTGAACTTATCACAAAAC 1569
||||||||||||||||||||||| || ||||| ||||||||||||||||| || ||||||
Sbjct 1638 CTAAAATGGATCTTGAGAGGAAT-AGAAATGCTTGGAATGTCTTGAACTTGTCGCAAAAC 1696
Query 1570 TATTGCCTACCCTCGT-TAAATGATGAGAGTTTGTTGAGTGCTGTTTTTGAGGGATCTGG 1628
||||| |||||||| | | |||||||||||| ||||||||||||||||||| | ||||||
Sbjct 1697 TATTGTCTACCCTC-TCTTAATGATGAGAGTCTGTTGAGTGCTGTTTTTGAAGAATCTGG 1755
Query 1629 CGTGGCAGATACAGGATTGACCGGAACAAACTACAAATTTGGGTTCCAATTCGGTAGATC 1688
| |||||||| | ||| ||| |||||||||||||||||||| |||||||| ||||||||
Sbjct 1756 CATGGCAGATGCTGGACTGAGTGGAACAAACTACAAATTTGGATTCCAATTTGGTAGATC 1815
Query 1689 TGAATATCTTTCTAATCAGGATGACACCCAAA--TTCTAGAAACGTTATTTCCTTTTCCC 1746
||||||| ||||| ||||||||||| |||| |||||||||| |||||||| ||||||
Sbjct 1816 TGAATATATTTCTTCTCAGGATGACA--CAAACCTTCTAGAAACATTATTTCCCTTTCCC 1873
Query 1747 ACATTACTTCCGTCATTCCAGCCGAAGCTCCATATGTCAGAATTTC-TACCTTTCCAAAA 1805
|| || ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct 1874 ACTTTGCTTCCGTCATTCCAGCCGAAGCTCCATCTGTCAGAA-TTCTTACCTTTCCAAAA 1932
Query 1806 GAATAGTACACTTCCTTCCAGAGTTCTCAGCTGGATGCTTAAGGCAGAGACAAGGGATAC 1865
|||||||||||||||||| ||||||||||||||| |||| ||||||||| ||| ||||||
Sbjct 1933 GAATAGTACACTTCCTTCAAGAGTTCTCAGCTGGTTGCTAAAGGCAGAGCCAATGGATAC 1992
Query 1866 TCCACTTCCTGTTGTAATAATGCAAGAATGCTTGACAATCTACATCAGGAGGCAGGTGGA 1925
|| |||||| |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 1993 TCGACTTCCCGTTGTAATTATGCAGGAATGCTTCACAATTTACATAAGGAGGCAGGTGGA 2052
Query 1926 CGACATTGGCAAAGTGATTTTGTCAAAACTAATGAATGATTGGAAATTGATGCACGAACT 1985
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2053 CTACATTGGCAAAGTGATTTTGTCAAAACTAATGAATGACTGGAAATTGATGCACGAACT 2112
Query 1986 TGCGGTGTTGCGTGCCATTTACTTGTTAGGTTCAGGGGACCTTCTGCAGCATTTTCTGAC 2045
||| || ||||| |||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 2113 TGCTGTATTGCGCGCCATTTACTTGCTAGGTTCAGGGGACCTGCTGCAGCATTTTCTGAC 2172
Query 2046 TGTCATATTCGATAGACTGAGCAAGGGAGAGTCATCAAATGATGATTTTGAGTTGAACAT 2105
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2173 TGTCATTTTCGATAGGCTGGGCAAGGGAGAGTCATCAAATGATGATTTTGAGTTGAACAT 2232
Query 2106 AATCCTTCAGGAATCTATTAGAAATTCAGCTGATGCCATGTTGTTAAGCAGTCCTGATGC 2165
||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 2233 AATACTTCAGGAATCAATTAGAAATTCAGCTGATGCCATGCTGTTAAGCAGTCCTGATTC 2292
Query 2166 ATTGGTGGTATCTATTTCCAGTGAAGGGTCTTTGGACAGAGACAAAGATGACAAGGGTGA 2225
||||||||||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct 2293 ATTGGTGGTATCTATTTCCAGAGAAG---------ACAGAGACAAAGATGATAAGGGTGA 2343
Query 2226 CGTAAAAACCCGTTCTTCAACTCGTAAAAGCCGCGTTAACAATTTTGGGATAGATTGCCT 2285
| ||| | ||| ||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 2344 CATAATACCCCTTTCTTCAACTCGTAAAAGCCGCGTTAACAGCTTTGGAATAGATTGTCT 2403
Query 2286 TGAGTCTCTCAAATTCACATACAAGGTGCCGTGGCCGCTAGAGCTTATTGCGAACAGCGA 2345
||||||||||||||||||||||||||||| ||||| || ||||||||||| || || ||
Sbjct 2404 CGAGTCTCTCAAATTCACATACAAGGTGCCATGGCCACTTGAGCTTATTGCCAATAGTGA 2463
Query 2346 GGCCATTAAGAAGTATAACCAGGTCA----A---------A----C--G--AGCAAAATA 2384
|||||||||||||||||||||||| | | | | | |||||||||
Sbjct 2464 GGCCATTAAGAAGTATAACCAGGTGATGGGATTTTTGTTGAAGGTCAAGCGAGCAAAATA 2523
Query 2385 TGTGCTTGATAAAGCACGAAGGTGGATGTGGAAGGGTAAAGGCTCTGCAACAAAAATCCG 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2524 TGTGCTTGATAAAGCACGAAGGTGGATGTGGAAGGGTAAAGGCTCTGCAACAAAAATCCG 2583
Query 2445 CAAGCACCATTGGTTACTGGAACAAAAGCTCCTCAATTTTGTGGATGCTTTTCATCAATA 2504
||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 2584 CAAGCACCACTGGTTACTAGAACAAAAGCTCCTCAACTTTGTGGATGCTTTTCATCAATA 2643
Query 2505 CGTAATGGACAGGGTATATCACACTGCATGGCGTGAACTGTGCGAAGCTATGGTAAAAGC 2564
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 2644 CGTAATGGACAGGGTATATCACACTGCGTGGCGTGAACTGTGTGAAGCGATGGTAAAAGC 2703
Query 2565 AGGGTCTCTAGATGAGGTCATAGATGTACATGAGACGTACTTGTTATCAATTCAGAGGCA 2624
||||||||| |||||||||||| |||||||||| || ||||||||||| |||||| ||||
Sbjct 2704 AGGGTCTCTGGATGAGGTCATATATGTACATGAAACCTACTTGTTATCGATTCAGCGGCA 2763
Query 2625 ATGTTTTGTGGTTCAAGAAAAGCTGTGGGTAATCATCGCAAGTCGGATCAACATAATTCT 2684
||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 2764 ATGCTTTGTGGTTCAAGAAAAGCTGTGGGCAATCATCGCAAGTCGGATCAACATGATTCT 2823
Query 2685 CGGGTTAGCTCTAGAATTCTACTCAATACAACAGACGCTGAGCAGCGGTGGAGCAGTTTC 2744
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2824 CGGTTTAGCTCTAGAATTCTACTCAATACAACAGACACTGAGCAGCGGTGGAGCAGTTTC 2883
Query 2745 AGCTATCAAGGCTAGATGCGAAATGGAGATAGACCGCATTGAGAAACAATTTGAGGACTG 2804
||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 2884 AGCCATCAAGGCTAGATGCGAAATGGAAATAGACCGTATAGAGAAACAATTTGAGGACTG 2943
Query 2805 TATTGCATTCCTCCTTAGAGTATTGA-CTTCGAAGCTGAACGTGGGACACTTCCCTCATC 2863
|||||| ||||| || |||||||| | ||||||||||||| ||||||||||||||||||
Sbjct 2944 TATTGCTTTCCTTCTCAGAGTATT-ATCTTCGAAGCTGAATGTGGGACACTTCCCTCATT 3002
Query 2864 TGGCAGATTTGGTGACCAGAATCAATTACAATTATCACTACATGTCTGACACTGGAAGCT 2923
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 3003 TGGCTGATTTGGTGACCAGAATCAATTACAATTATCACTACATGTCAGATACTGGAAGCT 3062
Query 2924 TAATGACTGTTTCTGGA 2940
| |||||| |||||||
Sbjct 3063 TGATGACTACTTCTGGA 3079
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 146437306617
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5