BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472290 Length=1781 Score E Sequences producing significant alignments: (Bits) Value AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7134790-713... 2512 0.0 AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-... 898 0.0 > AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7134790-7137781 REVERSE LENGTH=1833 Length=1833 Score = 2512 bits (1360), Expect = 0.0 Identities = 1559/1652 (94%), Gaps = 26/1652 (2%) Strand=Plus/Plus Query 1 AAAGATagagagagagagagagTGAGGGATCTTCAATATCGAAGCCATTAGAGGGAAAGA 60 ||||| ||| |||||||||| | || | |||||||| | |||||||||||||| |||||| Sbjct 3 AAAGAGAGATAGAGAGAGAGTGGGAAGTATCTTCAAAACCGAAGCCATTAGAGAGAAAGA 62 Query 61 GAGCGTGGTTGAATCTTTGGGTTTTACTAAAAGATCTCTCTTTCTCTCCTTTGTTTGATC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 GAGCGTGGTTGAATCTTTGGGTTTTACTAAAAGATCTCTCTTTCTCTCCTTTGTTTGATC 122 Query 121 AACTTGGATCCAACGGG-GAAAAGACTATTAGGGTTTAGGAGATTCACTGGGTTTC-TGA 178 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | Sbjct 123 AACTTGGATCCAACGGGATAAAAGACTATTAGGGTTTAGGAGATTCACTGGGTTTCAT-A 181 Query 179 AGAATCTGTGATCAAGGGA-CAAGGGTTGACTTAATTTTGCGGTGGTTCTTTGAATTGAC 237 ||||| | | || || ||||||| |||||||| | ||| ||||||||||||||||| Sbjct 182 AGAAT-T-T-AT-----GATCAAGGGTCGACTTAATCTCGCGTTGGTTCTTTGAATTGAC 233 Query 238 TGTAAAAAGATAACGAAGAAGAAGAAAATGGTTAGATCAGATGAAAATAGCCTTGGATTA 297 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 234 TGTGAAAAGATAACGAAGAAGAAGAAAATGGTTAGATCAGATGAAAATAGCCTTGGATTA 293 Query 298 ATCGGATCAATGAGTCTCCAA---GGCGGAG--G-AGGAAAGATCAAGACGACGGCAACA 351 ||||||||||||||||||||| || |||| | ||||||||||||||||||||||||| Sbjct 294 ATCGGATCAATGAGTCTCCAAGGGGGAGGAGTAGTAGGAAAGATCAAGACGACGGCAACA 353 Query 352 ACAGGACCGACCAGAAGAGCACTAAGCACTATTAACAAGAACATCATTGAAGCGCCGTCT 411 ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 354 ACAGGACCGACAAGAAGAGCACTAAGTACTATTAACAAGAACATCACTGAAGCGCCGTCT 413 Query 412 TACCCTTATGCTGTCAACAAAAGATCACTGTCTGAAAGGGATGGCATCTGTAATAAACCA 471 |||||||||||||||||||| |||||| | |||||||| |||||||| |||||||||||| Sbjct 414 TACCCTTATGCTGTCAACAAGAGATCAGTTTCTGAAAGAGATGGCATTTGTAATAAACCA 473 Query 472 CCTGTGCATCGACCAGTTACTAGGAAGTTTGCTGCTCAGTTAGCAGATCAGAAGCCACAA 531 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 474 CCTGTGCATCGACCAGTTACTAGGAAGTTTGCTGCTCAGTTAGCAGATCATAAGCCACAT 533 Query 532 ATCCGTGAGGAGGAAACTAAGAAACCAGACTCGGTTTCAAGCGAAGAACCAGAGAGGATT 591 |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||| Sbjct 534 ATCCGTGATGAGGAAACTAAGAAACCAGACTCAGTTTCAAGTGAAGAACCAGAGACGATT 593 Query 592 ATCATTGATGGGGATGATAGTGAGACAGAAGGAGGCGACTTTAATGAGCCAATGTTTGTT 651 |||||||||| |||||| ||||| | ||||||||| |||| |||||||||||||||||| Sbjct 594 ATCATTGATGTGGATGAAAGTGATAAAGAAGGAGGTGACTCTAATGAGCCAATGTTTGTA 653 Query 652 CAACACACTGAAGCAATGCTGGAGGAGATTGACCAGAAGGAGAAGGAGATTGAAATGGAA 711 ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 654 CAACATACTGAAGCAATGCTGGAGGAGATTGAACAGATGGAGAAGGAGATTGAAATGGAA 713 Query 712 GATGCAGACAAAGAAGAAGAGCCTGTGATCGATATTGATGCCTGTGATAAAAAGAATCCT 771 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 714 GATGCAGACAAAGAAGAAGAGCCTGTGATCGATATTGATGCCTGTGATAAGAATAATCCT 773 Query 772 TTGGCTGCGGTTGAATATATCCATGATATGCATACCTTCTACAAGAATTTTGAGAAACTT 831 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 TTGGCTGCGGTTGAATATATCCATGATATGCATACCTTCTACAAGAATTTTGAGAAACTT 833 Query 832 AGTTGTGTGCCTCCTAACTACATGGACAATCAACAAGATCTTAATGAGAGGATGAGAGGA 891 ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 834 AGTTGCGTGCCTCCTAACTATATGGACAATCAACAAGATCTTAATGAGAGAATGAGAGGA 893 Query 892 ATCCTCATTGACTGGTTAATTGAGGTGCACTACAAGTTTGAGCTGATGGAAGAAACTCTT 951 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 894 ATCCTCATTGACTGGTTAATTGAGGTGCACTACAAGTTTGAACTGATGGAGGAAACTCTT 953 Query 952 TATCTCACAATCAATGTCATCGACAGATTCCTTGCGGTTCATCAAATCTTGAGGAAAAAG 1011 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 954 TATCTCACAATCAATGTCATCGACAGATTCCTTGCGGTTCATCAAATCGTGAGGAAAAAG 1013 Query 1012 CTTCAGCTTGTTGGTGTTACTGCTTTGTTGCTTGCATGTAAGTATGAAGAAGTTTCAGTT 1071 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1014 CTTCAGCTTGTTGGTGTTACTGCTTTGTTGCTTGCATGTAAATATGAAGAAGTTTCAGTT 1073 Query 1072 CCAGTGGTAGATGATCTCATCTTGATCTCTGACAAAGCTTACACTAGAAGAGAAGTGCTA 1131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1074 CCAGTGGTAGATGATCTCATCTTGATCTCTGACAAAGCTTACTCTAGAAGAGAAGTGCTA 1133 Query 1132 GATATGGAGAAGCTAATGGCCAACACCTTGCAATTCAATTTCTCTCTACCAACTCCATAT 1191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 GATATGGAGAAGCTAATGGCCAACACCTTGCAATTCAATTTCTCTCTACCAACTCCATAT 1193 Query 1192 GTTTTCATGAAACGCTTTCTCAAAGCTGCCCAATCTGACAAAAAGCTTGAGGTTTTATCG 1251 |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 1194 GTTTTCATGAAACGATTTCTCAAAGCTGCCCAATCTGACAAGAAGCTTGAGATTTTATCA 1253 Query 1252 TTCTTTATGATCGAGCTTTGCCTTGTGGAGTATGAGATGCTAGAGTATCTTCCATCTGAG 1311 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1254 TTCTTTATGATCGAGCTTTGCCTTGTGGAGTATGAGATGCTAGAGTATCTTCCATCTAAG 1313 Query 1312 CTTGCGGCCTCGGCAATCTACACTGCTCAGTGTACAGTTAAGGGATTTGAAGAATGGAGC 1371 || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1314 CTGGCGGCCTCAGCAATCTACACTGCTCAGTGTACACTTAAGGGATTTGAAGAATGGAGC 1373 Query 1372 AAAACCTGTGAGTTTCACACAGGCTACAAGGAAGAACAGCTACTGGAATGTGCGAGAAAG 1431 ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct 1374 AAAACCTGTGAGTTTCACACAGGCTACAACGAAAAACAGCTACTGGCATGTGCGAGAAAG 1433 Query 1432 ATGGTTGCTTTCCATCACAAGGCAGGAACAGGGAAGCTCACAGGAGTTCACAGGAAGTAC 1491 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1434 ATGGTTGCTTTCCATCACAAGGCAGGAACAGGGAAGCTCACAGGAGTTCACAGAAAGTAC 1493 Query 1492 AACACATCTAAGTTCTGTCATGCTGCAAGAACTGAACCAGCTGGGTTTCTGCTTTAATGG 1551 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1494 AACACATCTAAGTTCTGTCATGCTGCAAGAACTGAACCAGCTGGGTTTCTGATTTAAT-- 1551 Query 1552 AATAATAAGAATCTAATATGACTTAACTCGAGTTTTTCTTTTGAA-AAA--GAGTgagag 1608 | ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||| Sbjct 1552 ATTAATAAGAATCTAATATGACTTAACTCGAGTTTTTCTTTAGAACAAAAAGAGTGTGAG 1611 Query 1609 agagagagagaTAG-AG--CAAGTTGCCCAAA 1637 ||| |||||||||| || ||||||||||||| Sbjct 1612 AGAAAGAGAGATAGTAGAGCAAGTTGCCCAAA 1643 Score = 178 bits (96), Expect = 2e-43 Identities = 130/145 (90%), Gaps = 8/145 (6%) Strand=Plus/Plus Query 1637 ATTCTTCTCTTTTTAAGGTCTTTAGATCTTTCTTCACTTGAGAGAGAATAAAAAGATGCA 1696 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1697 ATTCTTCTCTTTCTAAGGTCTTTAGATCTTTCTTCACTTGAGAGAGAATAAAAAGA---A 1753 Query 1697 GTCAGTCTTTTGATATCATGTTTTCCTATATTCAAATTGTGAATCGATCCTTGTATAGAC 1756 || ||| ||||||||| |||||||||||||| |||||||||||| ||||||||||| Sbjct 1754 -TCT-TCT---GATATCATGCTTTCCTATATTCAACTTGTGAATCGATTCTTGTATAGAC 1808 Query 1757 TCAGGAAAATCTATGACCCATTTTG 1781 |||||||||||||||| ||| |||| Sbjct 1809 TCAGGAAAATCTATGATCCAGTTTG 1833 > AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-7132183 REVERSE LENGTH=600 Length=600 Score = 898 bits (486), Expect = 0.0 Identities = 547/575 (95%), Gaps = 10/575 (2%) Strand=Plus/Plus Query 978 ATTCCTTGCGGTTCATCAAATCTTGAGGAAAAAGCTTCAGCTTGTTGGTGTTACTGCTTT 1037 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 6 ATTCCTTGCGGTTCATCAAATCGTGAGGAAAAAGCTTCAGCTTGTTGGTGTTACTGCTTT 65 Query 1038 GTTGCTTGCATGTAAGTATGAAGAAGTTTCAGTTCCAGTGGTAGATGATCTCATCTTGAT 1097 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 GTTGCTCGCATGTAAATATGAAGAAGTTTCAGTTCCAGTGGTAGATGATCTCATCTTGAT 125 Query 1098 CTCTGACAAAGCTTACACTAGAAGAGAAGTGCTAGATATGGAGAAGCTAATGGCCAACAC 1157 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 126 CTCTGACAAAGCTTACTCTAGAAGAGAAGTGCTAGATATGGAGAAGCTAATGGCCAACAC 185 Query 1158 CTTGCAATTCAATTTCTCTCTACCAACTCCATATGTTTTCATGAAACGCTTTCTCAAAGC 1217 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 186 CTTGCAATTCAATTTCTCTCTACCAACTCCATATGTTTTCATGAAACGATTTCTCAAAGC 245 Query 1218 TGCCCAATCTGACAAAAAGCTTGAGGTTTTATCGTTCTTTATGATCGAGCTTTGCCTTGT 1277 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 246 TGCCCAATCTGACAAGAAGCTTGAGATTTTATCATTCTTTATGATCGAGCTTTGCCTTGT 305 Query 1278 GGAGTATGAGATGCTAGAGTATCTTCCATCTGAGCTTGCGGCCTCGGCAATCTACACTGC 1337 ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct 306 GGAGTATGAGATGCTAGAGTATCTTCCATCTAAGCTGGCGGCCTCAGCAATCTACACTGC 365 Query 1338 TCAGTGTACAGTTAAGGGATTTGAAGAATGGAGCAAAACCTGTGAGTTTCACACAGGCTA 1397 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 TCAGTGTACACTTAAGGGATTTGAAGAATGGAGCAAAACCTGTGAGTTTCACACAGGCTA 425 Query 1398 CAAGGAAGAACAGCTACTGGAATGTGCGAGAAAGATGGTTGCTTTCCATCACAAGGCAGG 1457 ||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 426 CAACGAAGAACAGCTACTGGCATGTGCGAGAAAGATGGTTGCTTTTCATCACAAGGCAGG 485 Query 1458 AACAGGGAAGCTCACAGGAGTTCACAGGAAGTACAACACATCTAAGTTCTGTCATGCTGC 1517 ||||||||||||||||||| | | ||||||||||||||||||| ||||||||| Sbjct 486 AACAGGGAAGCTCACAGGA----A--G----TACAACACATCTAAGTTCTTTCATGCTGC 535 Query 1518 AAGAACTGAACCAGCTGGGTTTCTGCTTTAATGGA 1552 ||||| ||||||||||||||||||||||||| ||| Sbjct 536 AAGAAGTGAACCAGCTGGGTTTCTGCTTTAAGGGA 570 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88101956475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5