BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472297
Length=3005
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20640.1 | Symbols: | Plant regulator RWP-RK family protein... 4719 0.0
AT1G76350.1 | Symbols: | Plant regulator RWP-RK family protein... 1164 0.0
> AT1G20640.1 | Symbols: | Plant regulator RWP-RK family protein
| chr1:7154560-7158218 FORWARD LENGTH=3068
Length=3068
Score = 4719 bits (2555), Expect = 0.0
Identities = 2769/2872 (96%), Gaps = 15/2872 (1%)
Strand=Plus/Plus
Query 143 ACAACAAATTGCAACAGAGGAAACTTT-AAACCCCACTTGAGGAAGGAATCTTTAAGAAT 201
||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| |||||
Sbjct 199 ACAACAAATTGCAACAGAGGAAA-TTTAAAAACCCACTTGAGGAAGGAATCTTTGAGAAT 257
Query 202 CTCTCTCTGACTTATGGTGCTTCATTGATTTTGGAGATATATCCATGGAAGATAGTTTTC 261
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 258 CTCTCTCTGACTTATGTTGCTTCATTGATTTTGGAGATATATCCATGGAAGATAGTTTCC 317
Query 262 TTCAATCTGAGAACGCCGTTATGGACGCTGACTTCATGGATGGATTACTACTAGATGGTT 321
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 318 TTCAATCTGAGAACGTGGTTATGGACGCTGACTTCATGGATGGATTGTTACTAGATGGTT 377
Query 322 GTTGGTTAGAGACAACAGATGGATCTGAGTTTCTTAACTTAGCTCCTTCAACTTCTTCTG 381
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 378 GTTGGTTAGAGACTACAGATGGATCTGAGTTTCTTAACATAGCTCCTTCAACTTCTTCTG 437
Query 382 TTAGCCCTTTTGATCCATCTTCCTTCATGTGGTCTCCAACTCAAGATACATCAGCTCTCT 441
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 438 TTAGCCCTTTTGATCCAACTTCCTTCATGTGGTCTCCAACTCAAGATACATCAGCTCTTT 497
Query 442 GTACATCGGGAGTTGTATCTCAGATGTATGGTCAGGACTGTGTAGAAAGATCGAGTCTTG 501
| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 498 GCACATCAGGAGTTGTATCTCAGATGTATGGTCAGGATTGTGTAGAAAGATCTAGTCTTG 557
Query 502 ATGAGTTTCAATGGAACAAACGATGGTGGATTGGACCAGGAGGTGGTGGTTCTTCTGTTA 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 558 ATGAGTTTCAATGGAACAAACGATGGTGGATTGGACCAGGAGGTGGTGGTTCTTCGGTTA 617
Query 562 CTGAGAGATTGGTTCAAGCAGTTGAATACATTAAAGATTACACAACGGAGAGAGGCTCGC 621
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||| |
Sbjct 618 CTGAGAGGTTGGTTCAAGCAGTTGAACACATTAAAGATTACACAACAGCGAGAGGCTCAC 677
Query 622 TTATTCAGTTATGGGTTCCGGTTAATAGAGGTGGTAAGCGAGTTTTGACCACAAAGGAAC 681
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 678 TTATTCAGTTATGGGTTCCGGTTAATAGAGGCGGTAAGCGAGTTTTGACCACAAAGGAAC 737
Query 682 AACCTTTTAGCCATGATCCGTTGTGTCAAAGACTTGCAAACTATAGAGAGATCTCTGTGA 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 AACCTTTTAGCCATGATCCGTTGTGTCAAAGACTTGCAAACTATAGAGAGATCTCTGTGA 797
Query 742 AATATCAGTTCTCTGCTGAGCAAGATGATTCAAAGGCCTTAGCTGGTTTGCCTGGAAGGG 801
| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 798 ATTATCACTTCTCTGCTGAGCAAGATGATTCCAAGGCTTTAGCTGGTTTGCCTGGGAGGG 857
Query 802 TTTTCTTGGGGAAGCTTCCTGAATGGACTCCTGATGTTAGGTTTTTCAAGAGCGAGGAGT 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 858 TTTTCTTGGGGAAGCTTCCTGAATGGACTCCTGATGTTAGGTTTTTCAAGAGCGAGGAGT 917
Query 862 ATCCGAGAGTACACCACGCTCAGGACTGCGGTGTCCGTGGAACGCTGGCGATTCCGGTGT 921
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 918 ATCCGAGAGTACACCATGCTCAGGACTGCGATGTCCGTGGAACGCTGGCGATTCCGGTGT 977
Query 922 TTGAACAAGGTAGTAATATTTGTTTGGGTGTTATTGAGGTTGTAATGACCACTGAGATGG 981
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 978 TTGAACAAGGTAGTAAGATTTGCTTGGGTGTTATTGAGGTTGTAATGACCACTGAGATGG 1037
Query 982 TTAAACTAAGACCTGAGCTTGAAAGCATTTGCAGAGCACTTCAGGCAGTTGATCTTAGGA 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038 TTAAACTAAGACCTGAGCTTGAAAGCATTTGCAGAGCACTTCAGGCAGTTGATCTTAGGA 1097
Query 1042 GCACCGAATTTCCGATTCCGCCTACTCTAAAGGGATGTGACTTATCCTACAAAGCTGCAT 1101
||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct 1098 GCACCGAGCTTCCGATTCCACCTTCTCTAAAGGGATGTGACTTATCCTACAAAGCTGCCT 1157
Query 1102 TACCTGAAATCCGAAACCTCTTGAGATGTGCTTGTGAGACTCATAAACTACCTTTAGCTC 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1158 TACCTGAAATCCGAAACCTCTTGAGATGTGCTTGTGAGACTCATAAACTACCTTTAGCTC 1217
Query 1162 AGACATGGGTCTCTTGTCAACAACAAAACAAAAGCGGGTGCCGTCACAACGATGAGAACT 1221
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1218 AGACATGGGTTTCTTGTCAACAGCAAAACAAAAGCGGGTGCCGTCACAACGATGAGAACT 1277
Query 1222 ACATCCATTGCGTATCAACCATTGATGATGCTTGCTACGTTGGTGATCCAACAGTTCGCG 1281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1278 ACATCCATTGCGTATCAACCATTGATGATGCTTGCTACGTTGGTGATCCAACAGTTCGTG 1337
Query 1282 AGTTCCACGAAGCTTGCTCTGAGCATCACCTCTTGAAAGGCCAAGGAGTTGCAGGTCAAG 1341
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338 AGTTCCATGAAGCTTGCTCTGAGCATCACCTCTTGAAAGGCCAAGGAGTTGCAGGTCAAG 1397
Query 1342 CCTTCTTGACCAATGGACCTTGCTTTTCGTCTGATGTATCTAACTACAAGAAATCAGAGT 1401
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1398 CCTTCTTGACCAATGGACCTTGCTTTTCATCTGATGTATCTAACTACAAGAAATCAGAGT 1457
Query 1402 ACCCTCTCTCTCACCATGCTAATATTTACGGTTTACATGGCGCGGTTGCAATTCGCCTGC 1461
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1458 ACCCTCTCTCTCACCATGCTAATATGTACGGTTTACATGGCGCGGTTGCAATTCGCCTGC 1517
Query 1462 GCTGCATCCACACGGGCTCTGCTGATTTCGTCTTAGAGTTCTTTTTGCCCAAAGACTGCG 1521
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1518 GGTGCATCCACACGGGCTCTGCTGATTTCGTCTTAGAGTTCTTTTTGCCTAAAGACTGCG 1577
Query 1522 ATGATCTGGAGGAACAGAGGAAAATGTTGAATGCTCTTTCAACTATTATGGCTCATGTGC 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578 ATGATCTGGAGGAACAGAGGAAAATGTTGAATGCTCTTTCAACTATTATGGCTCATGTGC 1637
Query 1582 CTAGAAGCTTAAGGACTGTTACAGATAAAGAACTAGAAGAAGAGAGTGAAGTGATAGAAA 1641
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1638 CTAGAAGCTTAAGGACTGTTACAGACAAAGAACTAGAAGAAGAGAGTGAAGTGATAGAGA 1697
Query 1642 GGGAAGAGATAGTAACGCCAAAGATAGAAAACGCATCGGAACTCCACGGAAATTCCCCAT 1701
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1698 GGGAAGAGATAGTAACGCCAAAGATAGAAAACGCATCTGAACTCCACGGAAATTCCCCAT 1757
Query 1702 GGAACGCCTCTCTCGAAGAAATCCAGCGGAGTAATAATACTAGTAATCCTCAGAATCTTG 1761
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1758 GGAATGCCTCTCTTGAAGAAATCCAGCGGAGTAATAATACTAGTAATCCTCAGAATCTTG 1817
Query 1762 GATTGGTATTTGATGGAGGAG---AACCACATGATGGGTTTGGCTTAAAAAGAGGTTTTG 1818
|| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||
Sbjct 1818 GACTGGTATTTGATGGAGGAGACAAACCAAATGATGGTTTTGGCTTAAAAAGAGGTTTTG 1877
Query 1819 ACTACACCATGGATTCTAATGTCAATGAGAGCAGCACTTTCTCTAGTGGCGGTTTCAGTA 1878
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1878 ACTACACCATGGATTCTAATGTCAATGAGAGCAGCACTTTCTCTAGTGGTGGTTTCAGTA 1937
Query 1879 TGATGGCCGAGAAAAAGCGTACAAAAGCAGATAAAACCATCACTTTGGATGTTCTTCGAC 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1938 TGATGGCCGAGAAAAAGCGTACAAAAGCAGATAAAACCATCACTTTGGATGTTCTTCGAC 1997
Query 1939 AGTATTTCGCAGGGAGCTTGAAAGATGCAGCCAAGAATATCGGTGTTTGTCCAACGACCT 1998
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1998 AGTATTTCGCTGGGAGCTTGAAAGATGCAGCCAAGAATATCGGTGTTTGTCCAACGACCT 2057
Query 1999 TGAAGAGAATATGCAGACAGCATGGTATACAGAGATGGCCTTCAAGAAAGATCAAGAAAG 2058
||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct 2058 TGAAGAGAATATGCAGACAGCATGGTATACAAAGATGGCCTTCAAGAAAGATAAAAAAAG 2117
Query 2059 TGGGACATTCTCTGCAGAAGATCCAACGGGTTATTGATTCGGTTCAAGGTGTTTCTGGTC 2118
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 2118 TGGGACATTCTCTGCAGAAGATCCAACGAGTGATTGATTCGGTTCAAGGTGTTTCTGGTC 2177
Query 2119 CTCTTCCGATAGGCTCCTTCTATGCGAATTTCCCAAATTTAGTCTCACAGTCACAAGAAC 2178
||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct 2178 CTCTTCCCATAGGCTCATTCTATGCAAATTTCCCCAATTTAGTCTCACAGTCACAAGAAC 2237
Query 2179 CAT--C-ACAAGCCAAGACCTCGCCTCCTCCTCCGCCGCCAGTGCAGCTAGCAAAGTCCC 2235
||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 2238 CATCACAACAAGCCAAGACCACGCCTCCTCCTCCGCCGCCAGTGCAGCTTGCAAAGTCCC 2297
Query 2236 CTGTATCCTCATATAGTCACAGTTCAAACTCTAGCCAATGTTGCTCCAGCGAAACCCAAC 2295
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2298 CTGTATCCTCGTATAGTCACAGTTCAAACTCTAGCCAATGTTGCTCCAGTGAAACCCAAC 2357
Query 2296 TAAACAGCGGTGCAACAACCGATCCTCCTTCAACTGATGTAGTAGGTGCATTGAAGAAGA 2355
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2358 TAAACAGCGGTGCAACAACCGATCCTCCTTCAACTGATGTAGGAGGTGCATTGAAGAAGA 2417
Query 2356 CAAGTAGCGAAATTGAGCTTCAAAGCTCGAGTCTTGATGAGACAATTTTGACTCTCTCCA 2415
| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2418 CGAGCAGCGAAATCGAGCTTCAAAGCTCGAGTCTTGACGAGACAATTTTGACTCTCTCCA 2477
Query 2416 GTTTAGAAAACATCCCTCAAGGCACCAACTTGTTATCATCTCAAGATGATGACTTTCTGA 2475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2478 GTTTAGAAAACATCCCTCAAGGCACCAACTTGTTATCATCTCAAGATGATGACTTTCTGA 2537
Query 2476 GGATTAAAGTTAGCTACGGAGAAGAGAAGATCAGATTACGGATGCGGAATTCGCGCAGGT 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2538 GGATTAAAGTTAGCTACGGAGAAGAGAAGATCAGATTACGGATGCGGAATTCGCGCAGGT 2597
Query 2536 TAACAGATCTATTGTGGGAGATCGGGAAGCGGTTTAGCATAGAGGATATGAGCAGGTATG 2595
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2598 TAAGAGATCTATTGTGGGAGATTGGGAAGCGGTTTAGCATAGAGGATATGAGCAGGTATG 2657
Query 2596 ATCTAAAGTACTTAGACGAGGACAATGAATGGGTTTTGTTGACTTGCGACGAAGATGTAG 2655
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2658 ATCTAAAGTACTTAGACGAAGACAATGAATGGGTTTTGTTGACTTGCGACGAAGATGTAG 2717
Query 2656 AAGAGTGTGTAGATGTCTGCAGAACCACACCGAGTCATACCATTAAGCTTTTGCTTCAGG 2715
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2718 AAGAGTGTGTAGATGTCTGCAGAACTACACCGAGTCATACCATTAAGCTTTTGCTTCAGG 2777
Query 2716 TTTCTTCTCATCATTTCCCTGAACGTTCTTCAGCTACAGAATACAGTTTATGGCACTGAC 2775
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2778 CTTCTTCTCATCATTTCCCTGAACGTTCTTCAGCTACTGAATACAGTTTATGGCACTGAC 2837
Query 2776 CTCAAATCAGAGAAAGAA-AACAGAAAAAGAAGCGTTTTAGGACATGACACAGAAGATAA 2834
|| ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 2838 CTTAAATCAGAGAAAGAAGAA-AGAAAAAGAAGCGTTTTAGGACATGACACAAAAGATAG 2896
Query 2835 TAATACCTTTGTGTTCTGTTACAATTGTTCATAATTTTATCTTCGtttttttttttGAAA 2894
||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||
Sbjct 2897 TAATACCTTTGTGTTCTGTTATAATTGTTCATAATTTTATCTTTGGTTTTTTT---GAAA 2953
Query 2895 GATTACTAGGAGAGGTGCTTTGGGTTTTGTTTTTAAAAACGCACCAGAGACAAGAAGAGA 2954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2954 GATTACTAGGAGAGGTGCTTTGGGTTTTGTTTTTAAAAACGCACCAGAGACAAGAAGAGA 3013
Query 2955 AGAACATGTAAAGATCTTATCTTCCTGAGATATTGAAGATGGtt-ttttttt 3005
|||||||||||||||| ||||||||||||| ||||||| || || |||||||
Sbjct 3014 AGAACATGTAAAGATCCTATCTTCCTGAGAAATTGAAGTTG-TTGTTTTTTT 3064
> AT1G76350.1 | Symbols: | Plant regulator RWP-RK family protein
| chr1:28639577-28643086 FORWARD LENGTH=2908
Length=2908
Score = 1164 bits (630), Expect = 0.0
Identities = 1143/1380 (83%), Gaps = 78/1380 (6%)
Strand=Plus/Plus
Query 294 TTCATGGATGGATTACTACTAGATGGTTGTTGGTTAGAGACAACAGATGGATCTGAGTTT 353
|||||||| |||||||| ||||| ||||| ||||||||||||||||||| ||| |||||
Sbjct 258 TTCATGGACGGATTACTTCTAGAAGGTTGCTGGTTAGAGACAACAGATGCATCCGAGTTC 317
Query 354 CTTAA-CTTAGCTCCTTCAACTTCTTCTGTTAG-CCCTTTTGATCCATCTTCCTTCATGT 411
||||| |||| |||||||| |||||| ||| |||||||||||| |||||||||||||
Sbjct 318 CTTAATTTTAG-TCCTTCAA---CTTCTG-TAGCCCCTTTTGATCCTTCTTCCTTCATGT 372
Query 412 GGTCTCCAACTCAAGATACATCAGCTCTCTGTACATCGGGAGTTGTATCTCAGATGTATG 471
|||||||||| |||| ||| || || || || || | |||||||||||||||
Sbjct 373 GGTCTCCAACGCAAG--ACA-CA----TC--TA-AT----AGCT-TATCTCAGATGTATG 417
Query 472 GTCAGGACTGTGTAGAAAGATCGAGTCTT---GAT-------------GAG-T-T-TC-A 511
|||| || ||| ||||||||| |||||| ||| ||| | | || |
Sbjct 418 GTCAAGATTGTCCAGAAAGATCAAGTCTTGAGGATCAAAACCAAGGGAGAGATCTCTCTA 477
Query 512 -ATGGAACAAACGATGGTGGATTGGACCAGGAGG---TGGTGG-TTCTTCTGTTACT-GA 565
| |||| ||| ||||||||||||||| | || | ||| || |||||||| | ||
Sbjct 478 CCTTTAACAGACGTTGGTGGATTGGACCAAGTGGTCATCATGGCTT-TTCTGTTA-TGGA 535
Query 566 GAGATTGGTTCAAGCAGTTGA-ATACATTAAAGATTACACAACG-GAGAGAGGCTCGCTT 623
|||||||||||||||| ||| | |||||||||||| ||| | | ||||||||||| |||
Sbjct 536 AAGATTGGTTCAAGCAG-TGACACACATTAAAGATTTCACTA-GTGAGAGAGGCTCTCTT 593
Query 624 ATTCAGTTATGGGTTCCGGTTAATAGAGGTGGTAAGCGAGTTTTGACCACAAAGGAACAA 683
|| ||||| ||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 594 ATACAGTTGTGGGTGCCTGTGGATAGAGGTGGTAAGCGAGTTTTGACCACAAAGGAACAA 653
Query 684 CCTTTTAGCCATGATCCGTTGTGTCAAAGACTTGCAAACTATAGAGAGATCTCTGTGAAA 743
|||||||| |||||||| |||||||||| ||||| | || ||||||||||||| |||
Sbjct 654 CCTTTTAGTCATGATCCAATGTGTCAAAGGCTTGCTCATTACAGAGAGATCTCTGAGAAT 713
Query 744 TATCAGTTCTCTGCTGAGCA--A-GA-T--GATTC-A-----AAGGCCTTAGCTGGTTTG 791
|||||||||||| |||| || | || | ||||| | | || ||| | |||||||
Sbjct 714 TATCAGTTCTCTACTGAACAGGAGGATTCAGATTCTAGTTCCAGGGACTTGGTTGGTTTG 773
Query 792 CCTGGAAGGGTTTTCTTGGGGAAGCTTCCTGAATGGACTCCTGATGTTAGGTTTTTCAAG 851
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 774 CCTGGAAGAGTTTTCTTGGGGAAGGTTCCTGAATGGACTCCTGATGTGAGGTTTTTCAAG 833
Query 852 AGCGAGGAGTATCCGAGAGTACACCACGCTCAGGACTGCGGTGTCCGTGGAACGCTGGCG 911
| ||||||||||||||||| || || ||||| ||||| | ||| || || ||| | ||
Sbjct 834 AATGAGGAGTATCCGAGAGTTCAACATGCTCAAGACTGTGATGTTCGAGGCACGTTAGCT 893
Query 912 ATTCCGGTGTTTGAACAAGGTAGTAATATTTGTTTGGGTGTTATTGAGGTTGTAATGACC 971
||||| |||||||||||||||||| | ||||| || ||||||||||||||||| |||||
Sbjct 894 ATTCCTGTGTTTGAACAAGGTAGTCAGATTTGCTTAGGTGTTATTGAGGTTGTGATGACT 953
Query 972 ACTGAGATGGTTAAACTAAGACCTGAGCTTGAAAGCATTTGCAGAGCACTTCAGGCAGTT 1031
|| | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 954 ACACAAATGGTTAAACTAAGTCCTGACCTTGAAAGCATCTGCAGAGCACTTCAGGCAGTT 1013
Query 1032 GATCTTAGGAGCACCGA-ATTTCCGATTCCGCCTACTCTAAAGGGATGTGACTTATCCTA 1090
|||||||| ||||| || | |||| || |||||| ||||||||||| || || || ||
Sbjct 1014 GATCTTAGAAGCACAGAGA-TTCCAATACCGCCTTCTCTAAAGGGACCAGATTTCTCTTA 1072
Query 1091 CAAAGCTGCATTACCTGAAATCCGAAACCTCTTGAGATGTGCTTGTGAGACTCATAAACT 1150
| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct 1073 CCAAGCTGCATTACCTGAAATCAGAAACCTCTTGAGATGTGCTTGCGAGACGCATAAACT 1132
Query 1151 ACCTTTAGCTCAGACATGGGTCTCTTGTCAAC-AACAAAACAAAAGC-GGGTGCCGTCAC 1208
||| |||||||| ||||||||||| |||| | |||||| ||||| | || |||||||||
Sbjct 1133 ACCATTAGCTCAAACATGGGTCTCATGTC-TCAAACAAAGCAAAA-CTGGTTGCCGTCAC 1190
Query 1209 AACGATGAGAACTACATCCATTGCGTATCAACCATTGATGATGCTTGCTACGTTGGTGAT 1268
|| ||||||||||| |||||||| ||||| || || |||||||||||||| |||||||||
Sbjct 1191 AATGATGAGAACTATATCCATTGTGTATCCACAATCGATGATGCTTGCTATGTTGGTGAT 1250
Query 1269 CCAACAGTTCGCGAGTTCCACGAAGCTTGCTCTGAGCATCACCTCTTGAAAGGCCAAGGA 1328
|| ||||| || || ||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct 1251 CCTACAGTCCGTGAATTCCACGAAGCTTGCTCTGAGCACCATCTCTTGAAAGGTCAAGGA 1310
Query 1329 GTTGCAGGTCAAGCCTTCTTGACCAATGGACCTTGCTTTTCGTCTGATGTATCTAACTAC 1388
|||| || ||||||| ||||||||||| ||||||||||| |||||||| |||| ||||
Sbjct 1311 GTTGTTGGAGAAGCCTTTTTGACCAATGGCCCTTGCTTTTCATCTGATGTTTCTAGCTAC 1370
Query 1389 AAGAAATCAGAGTACCCTCTCTCTCACCATGCTAATAT-TTACGGTTTACATGGCGCGGT 1447
|||||||| |||||||||||||||||||| || | ||| || || |||||||| | ||
Sbjct 1371 AAGAAATCTGAGTACCCTCTCTCTCACCACGCGACTATGTT-TGGCTTACATGGTACAGT 1429
Query 1448 TGCAATTCGCCTGCGCTGCATCCACACGGGCTCTGCTGATTTCGTCTTAGAGTTCTTTTT 1507
|| || ||| | ||||| |||||||| ||||| | |||||||||||| |||||||||||
Sbjct 1430 CGCGATACGCTTACGCTGTATCCACACTGGCTCAGTTGATTTCGTCTTGGAGTTCTTTTT 1489
Query 1508 GCCCAAAGACTG-CGATGATCTGGAGGAACAGAGGAAAATGTTGAATGCTCTTTCAACTA 1566
||| ||| | || || ||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 1490 GCCTAAAAATTGTCG-GGATATAGAGGAACAGAGGAAAATGTTGAATGCTCTTTCGACTA 1548
Query 1567 TTATGGCTCATGTGCCTAGAAGCTTAAGGACTGTTACAG-ATAAAGAACTAGAAGAAGAG 1625
| ||||| ||||| ||||||||||||||||| || || | | || |||||||||||||||
Sbjct 1549 TAATGGCGCATGTACCTAGAAGCTTAAGGACAGTCAC-GCAGAAGGAACTAGAAGAAGAG 1607
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149397156254
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5