BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472310 Length=801 Score E Sequences producing significant alignments: (Bits) Value AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) ... 854 0.0 AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) ... 665 0.0 > AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) | chr1:7200394-7201538 FORWARD LENGTH=801 Length=801 Score = 854 bits (462), Expect = 0.0 Identities = 709/822 (86%), Gaps = 42/822 (5%) Strand=Plus/Plus Query 1 ATGGAGAGAGGGAGAAAACATACTGACGCTGCTGCAGAACAGAGAGAACTGGCAATCAAG 60 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1 ATGGGGAGAGGGAGAAAACACACTGACGCTGCTGCAGAACAGAGAGAACTGGCAATTAAG 60 Query 61 GC--A-A--GTT--T-AA---AATTCT-T-TCGACG--TGTTAGGTCAATAAGAAAGGCG 105 || | | ||| | || |||| | ||| || || ||||||||||||||| | Sbjct 61 GCAAACATTGTTGATGAACCTTTTTCTGTATCGGCGATTGATAGGTCAATAAGAAA---G 117 Query 106 GCTTGGGAACGGGATGAAACTGGAACTTACCAGATATTGAGTGGTCGTTGCGAAGAGACC 165 || |||| ||| | |||||| |||| |||||||||| |||||||||||| ||||||| Sbjct 118 GC---GGAATGGGTTAAAACTGAAACTGACCAGATATTAAGTGGTCGTTGCCCAGAGACC 174 Query 166 GATGGGACGTGGTTAGGTATTTCTATTCGAGGCCGAGTCGCTTTTCTTGTGGATGCATGG 225 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || Sbjct 175 GATGGGACGTGGTTAGGTATTTCTACTCGAGGCCGAGTCGCTTTTCTTGTGGAGGCA-GG 233 Query 226 CCCCTACTTGTCA-ATGACAGATTCATCGGTGCCGAGCGTCGTACTCTTGAGTTCTTAGA 284 ||| || || | |||||||||| ||| |||||| |||||||||||||||||||||| Sbjct 234 -GACTA-TTAACAGA-GACAGATTCAACGGCGCCGAGAGTCGTACTCTTGAGTTCTTAGA 290 Query 285 GAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATTGGCTGCAGA-TACCGGACATACCG 343 ||||||||||||||||||||||||||||||||||| ||||||||| || | || || Sbjct 291 GAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATCGGCTGCAGATTA-CATACGTA--A 347 Query 344 CACGTAACACGCAGATATCCTATCAGCTAATTGTGGCCGACATAGCTTCAAACTCAATGT 403 || | |||| ||| ||| ||| ||||||||||||||||||||||||||||||||| Sbjct 348 CAAG-AACA--CAG-CCGCCTTTCATCTAATTGTGGCCGACATAGCTTCAAACTCAATGC 403 Query 404 TTTATATCTCCAAACCATC-TTTGTCTGAAAATGGCATTGTCCATATAGAGCCTGTTGGT 462 |||||||||||||||| | ||| ||||| ||||||||||| ||| ||||||||||||| Sbjct 404 TTTATATCTCCAAACC-GCGTTTCTCTGACTATGGCATTGTCTATACAGAGCCTGTTGGT 462 Query 463 CCTGGTGTTCATACCCTATCTTCAGATGGACTCGATTCCGAAGATGGACGCAGGGACTTA 522 ||||||||||| || |||||||||| ||||||||||||||| | |||| |||||||||| Sbjct 463 CCTGGTGTTCACACACTATCTTCAGCTGGACTCGATTCCGACGTTGGATACAGGGACTTA 522 Query 523 CATCTGAAAAACTCTTTTGGTGAGATGATTAACAGAGAACGACTACCACCAATAAGGGAG 582 | | ||| | |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 523 CGTATGAGACACTCTTTTTGTGAGATGATTAACAGAGAACGACTACCACCAATAAGGGA- 581 Query 583 C-TTGCT-AGGATTATGTATGATCCAGTCAGAGCTTACGAAAGAGTCCCACTGATG-TCT 639 | ||||| || ||||||||||||||||||| |||||||||||| || | ||||| | ||| Sbjct 582 CATTGCTGAG-ATTATGTATGATCCAGTCAAAGCTTACGAAAGCGTGCTACTGA-GCTCT 639 Query 640 ATTTTTGTCGTCGACATGAGGATTGGATCCGAACACTATGGAACAAGAAGTACGACAGCA 699 |||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct 640 ATTTTTTTCGTCGACATGAAGATTGGATACGAACACTATGGAACAAGAATTACGACAGCA 699 Query 700 TTGGTGGTGAAACGCACCAACGACGTGATGTTCTTTGAGAGGTACAGGGAGAAATTTAAT 759 ||||| |||||||||||||| || ||| |||||||||||||||||||||||| ||||||| Sbjct 700 TTGGTTGTGAAACGCACCAAGGAAGTGTTGTTCTTTGAGAGGTACAGGGAGATATTTAAT 759 Query 760 GATAACTGGGAAGATCACGACTTCGCGTTCACCATCATCTAG 801 ||| | ||||| || ||||||||||||||||||||||||||| Sbjct 760 GATGATTGGGACGACCACGACTTCGCGTTCACCATCATCTAG 801 > AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) | chr1:7194256-7195575 FORWARD LENGTH=946 Length=946 Score = 665 bits (360), Expect = 0.0 Identities = 609/722 (84%), Gaps = 46/722 (6%) Strand=Plus/Plus Query 88 AGGTCAATAAGAAAGGCGGCTTGGGAACGGGATGAAACTGGAACTTACCAGATATTGAGT 147 ||||||||| ||||||||||||||||| ||||||||| | |||| |||||||| Sbjct 79 AGGTCAATAGGAAAGGCGGCTTGGGAATGGGATGAAA---G------CCAGGTATTGAGT 129 Query 148 GGTCGTTGCGAAGAGACCGATGGGACGTGGTTAGGTATTTCTATTCGAGGCCGAGTCGCT 207 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 GGTCGTTGCGCAGAGACCGATGGGACGTGGTTAGGTATTTCTATTCGAGGCCGAGTCGCT 189 Query 208 TTTCTTGTGGATGCATGGCCCCTACTTGTCA-ATGACAGATTCATCGGTGCCGAGCGTCG 266 ||||||||||| ||| || ||| || || | |||||| ||||||| |||||| |||| Sbjct 190 TTTCTTGTGGAGGCA-GGGCCC--GTTAACAGA-GACAGAATCATCGGCGCCGAGTGTCG 245 Query 267 TACTCTTGAGTTCTTAGAGAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATTGGCTGC 326 ||||||||| |||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct 246 TACTCTTGATTTCTTAAAGAGCAACTTGAGTCCAGAGGACTTTGCAGATTCATTGGCT-- 303 Query 327 AGATACCGGACATACCGCACGTAACACGCAGATATCCTATCAGCTAATTGTGGCCGACAT 386 || | || ||| |||||||||| |||| ||||||| ||||||||||||||||| Sbjct 304 --TTA---G--ATTCCGGACGTAACACGGGGATAGCCTATCATCTAATTGTGGCCGACAT 356 Query 387 AGCTTCAAACTCAATGTTTTATATCTCCAAACCATCTTTGTCTGAAAATGGCATTGTCCA 446 || ||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||| | Sbjct 357 AGTTTCAAACTCAATGTTTTATATCTACAAACCGTCTTTGTCTGAAGATGGCATGGTCTA 416 Query 447 TATAGAGCCTGTTGGTCCTGGTGTTCATACCCTATCTTCAGATGGACTCGATTCCGAAGA 506 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 417 TACAGAGCCTGTTGGTCCTGGTGTTCATACCCTATCTTCAGCTGGACTCGATTCCGAAGT 476 Query 507 TGGACGCAGGGACTTACATCTGAAAAACTCTTTTGGTGAGATGATTAACAGAGAACGACT 566 ||||| ||||||||||| ||||||| || |||| |||| |||||||||||||| || Sbjct 477 TGGACACAGGGACTTACGTCTGAAACGCTATTTTTCTGAGCGGATTAACAGAGAACTACC 536 Query 567 ACCACCAATAA-GGGAGCTTGCT-AGGA--TTATGTATGATCCAGTCAGA-GCTTACGAA 621 | |||||| ||| ||||||| |||| ||||||||||| ||||| || ||| | || Sbjct 537 AGAACCAATCTCGGG-GCTTGCTGAGGAGGTTATGTATGATACAGTC-GAAGCT-AT-AA 592 Query 622 A-G-AGTCCCACTGATG-TCTATTTTTGTCGTCGACA-TGAGGATTGGATCCGAACACTA 677 | | || |||||||| | ||||| ||||||||||||| | | |||| | ||||||||| Sbjct 593 ACGGAGACCCACTGA-GCTCTATCTTTGTCGTCGACACTTTG-ATTGAAAACGAACACTA 650 Query 678 TGGAACAAGAAGTACGACAGCATTGGTGGTGAAACGCACCAA-CGACGTGATGTTCTTTG 736 |||||||||| |||||||||||||||| |||| |||||||| | | |||| |||||||| Sbjct 651 TGGAACAAGATGTACGACAGCATTGGTTGTGAGACGCACCATGCAA-GTGAGGTTCTTTG 709 Query 737 AGAGGTACAGGGAGAAATTTAATGATAACTGGGAA-GAT-CACGACTTCGCG-TTCACCA 793 |||||||||||| || |||||||||| ||||| || | | ||||||||| || ||||||| Sbjct 710 AGAGGTACAGGGCGAGATTTAATGATGACTGG-AACG-TGCACGACTTC-CGGTTCACCA 766 Query 794 TC 795 || Sbjct 767 TC 768 Score = 108 bits (58), Expect = 1e-22 Identities = 63/65 (97%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 1 ATGGAGAGAGGGAGAAAACATACTGACGCTGCTGCAGAACAGAGAGAACTGGCAATCAAG 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21 ATGGGGAGAGGGAGAAAACATACTGACGCTGCTGCAGAACAGAGAGAACTGGCAATCAAG 80 Query 61 G-CAA 64 | ||| Sbjct 81 GTCAA 85 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38981698072 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5