BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472337
Length=4117
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 3500 0.0
> AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured
cell; BEST Arabidopsis thaliana protein match is: proton pump
interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:7313946-7319574
FORWARD LENGTH=4673
Length=4673
Score = 3500 bits (1895), Expect = 0.0
Identities = 2126/2234 (95%), Gaps = 29/2234 (1%)
Strand=Plus/Plus
Query 1894 TAAAGACTGTGTGGACAGCCAACCTGCTGAAAAGAAAGAAGGAAATGCTGTTGATAGAAC 1953
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 2452 TAAAGACTGTGTGGACAGCCAACCTGCTGAAAACAAAGAAGGAAATGTTGTTGATAGAAC 2511
Query 1954 AGATGATAAAGTAGCCTCGACCGGTGAAGTTTTTGTGCCTGATACTTCTGAAGTGCTCAC 2013
|||||||||||||||||||||||||||||||| ||| | |||| ||||||||| ||| ||
Sbjct 2512 AGATGATAAAGTAGCCTCGACCGGTGAAGTTTCTGTACTTGATGCTTCTGAAGGGCTTAC 2571
Query 2014 TGTAGCGGCAGAGATAGAGAAAAGACCGTTTTACTTTCTGCCTAGAGTTCCAAGATATGA 2073
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 2572 TGTAGCGGCAGAGATAGAGAAAAGACCTTTTTACTTTCTGCCTAGAGTTCCTAGATATGA 2631
Query 2074 TGACGAAAAGTTAGCCGAGCAACTCAAGCATGCTGAAGAGCAGGTTGATCAGAAAACACA 2133
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2632 TGATGAAAAGTTAGCCGAGCAACTGAAGCATGCTGAAGAGCAGGTTGATCAGAAAACACA 2691
Query 2134 GAGTCGGGATGCTCTTAGAGCGGATATCCAGAAGATACGCGCAATATGTAAGGACTATGA 2193
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2692 AAATCGGGATGCTCTTAGAGCGGATATCCAGAAGATACGCGCAATATGTAAGGACTATGA 2751
Query 2194 TATAAGTTACAAGGCGGCCATGACAGAAGAGAGATCTGCAAGAAAAGCAATGCATTCAAA 2253
||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 2752 TATCAGTTACAAGGCGGTCATGGCAGAAGAGAGATCTGCAAGAAAAGCAATGCATTCAAA 2811
Query 2254 ACGGCAGGAAATTGAGGCCCTTCAGTCTATGATTAGCCGGGTTAAGAGTGCTGCATCTGT 2313
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2812 ACGGCAGGAAATTGAGGCCCTTCAGTCTATGATTAGCCGGGTTAAAAGTGCTGCGTCTGT 2871
Query 2314 TGATGATATTGATTCAAGGGTGCATAATATGGAACATATGATGCAACACACAACTTTATC 2373
||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct 2872 TGATGATATTGATTCAAGGGTGCGTAATATGGAACATACGATGCAGCACACAACTTTATC 2931
Query 2374 TCTGAATGAAGAAAAAGGATTCATGCGTGAAATAAAGCAGTTGAAGCAACTTCGCGAGCA 2433
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2932 TCTGAATGAAGAAAAAGGTTTCATGCGTGAAATAAAGCAGTTGAAGCAACTTCGCGAGCA 2991
Query 2434 GATATCTTCGAGTATGGGTACCAAGGATGAAGTTAAGCAAGCATTGGATGAGAAAGAGAA 2493
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2992 GATATCTTCGAGTATGGGTACCAAGGATGAAGTAAAGCAAGCATTGGATGAGAAAGAGAA 3051
Query 2494 AACAGAAGAACGTTTGAAGGTGTTGAGGAAGGAACTAGACGCGCTCAGAAACGATCTCTC 2553
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 3052 AACAGAAGAACGTTTGAAGGTGTTGAGGAAGGAACTAGACGCACTCAGAAACGATCTATC 3111
Query 2554 AAAAGCCGAAGCAATCACAAAAGCTGCTaaaaaaaaGTGTGATGAGGAATGGGAAGCGCA 2613
||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct 3112 AAAAGCCGAAGAAATCACAAAAGCTGCGAAAAAAAAGTGTGATGGGGAATGGGAAGCACA 3171
Query 2614 GAGTAAACTGCAAGAACAGTTCCGAGCTGCTGATGCTGTTCGCCAGGAAGCATTTGTGCA 2673
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3172 GAGTAAACTGCAAGAACAGTTCAGAGCTGCTGATGCTGTTCGCCAGGAAGCATTTGTGCA 3231
Query 2674 CCTACAGGATTTGAAGAAACAACAACGAGAAAAGAACAAATATTTCTTCAAGTACAGAGA 2733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3232 CCTACAGGATTTGAAGAAACAACAACGAGAAAAGAACAAATATTTCTTCAAGTACAGAGA 3291
Query 2734 TAATTCAAGGGCAGCAAGTGAAATGGCTTTGAAGAAAGACAGAGCAGCCCTGCAAAGCCT 2793
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3292 TAATTCAAGGGCAGCAAGTGAAATGGCTTTGAAGAAAGACAGAGCAGCACTGCAAAGCCT 3351
Query 2794 TTGTTCTGACCAGGTGGAGAGTTTCATGAATATGTGGAACAATGACGAGGAGTTCCGTAA 2853
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 3352 TTGTTCTGACCAGGTGGAGAATTTCATGAATATGTGGAACAATGACGACGAGTTCCGTAA 3411
Query 2854 ATACTATGTAAAAAGCAACACAAGGAGTACCTTTAGAAGACTAGGAACCCTAGATGGACG 2913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3412 ATACTATGTAAAAAGCAACACAAGGAGTACCTTTAGAAGACTAGGAACCCTAGATGGACG 3471
Query 2914 ATCTCTTGGCCCTGATGAGGAGCCACCTCGGATCACTTATGCTCCAAGAACAGACAAACT 2973
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3472 ATCTCTTGGCCCTGATGAGGAGCCACCTCGGATCACTTATGCTCCAAGAACGGACAAACT 3531
Query 2974 TAGAACCTCTAGTGACAGAGCAGAGAAACATGAGGCAGTTCCACCGGTTCCAGCTCAACA 3033
|||||| |||||||||||||||||||||||||||||||||||| | | || || |
Sbjct 3532 TAGAACTTCTAGTGACAGAGCAGAGAAACATGAGGCAGTTCCAGCA---C-AG---AA-A 3583
Query 3034 AGAGAGAGTCGTTAAATTTGAAGGTTCAAAAGTTGAAAACAATGGTAAGGCTGTTGCTAA 3093
|||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 3584 -GAGAAAGTCGTTAAATTTGAAGGTTCAAAAGTTGAAAACAACGGTAAGGAGGTTGCTAA 3642
Query 3094 ACCTACCGAACAGAAGAGTCAGACCACTAAATCTAAAAAGGCCGTCAAGCCAGACCAGCC 3153
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3643 ACCCACCGAGCAAAAGAGTCAGACCACTAAATCTAAAAAGGCCGTCAAGCCAGACCAGCC 3702
Query 3154 TCCACCAAATGTCACAGAATTGGTTTCTGGAAAAGAGGAGATAGAGAAGTCAGCAACACC 3213
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3703 TCCATCAATTGTCACAGAATTGGTTTCTGGAAAAGAGGAGATAGAGAAGTCAGCAACACC 3762
Query 3214 TGAAGaagaagagccacctaagttaacaaaagaggaagaggagttaattaagaaagaaga 3273
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3763 GGAAGAAGAAGAGCCGCCTAAGTTAACAAAAGAGGAAGAGGAGTTAATTAAGAAAGAAGA 3822
Query 3274 ggagaagagaaaacaaaaggaggctgcgaagaTGAAGGAGCAGCATCGGTTggaggaaat 3333
|||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct 3823 AGAGAAGAGAAAACAAAAGGAAGCTGCAAAGATGAAGGAGCAACATCGGTTAGAGGAAAT 3882
Query 3334 agcaaaagcgaaagaggcaatggagaggaagaagaagagagaggagaaagcaaaagcaag 3393
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3883 AGCAAAAGCGAAAGAGGCAATGGAGAGGAAGAAGAAGAGAGAGGAGAAGGCAAAAGCAAG 3942
Query 3394 agctgttctcaaggctcagaaggaagcagaagaaagggagaaggaacgagaaaagaagct 3453
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 3943 AGCTGTTCTCAAGGCTCAGAAGGAAGCCGAAGAAAGGGAGAAGGAACGAGAGAAGAAGCT 4002
Query 3454 aaggaagaaggagagaagaaaggggatttttacatcagaagagaCAGCAACAGAAAACCC 3513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4003 AAGGAAGAAGGAGAGAAGAAAGGGGATTTTTACATCAGAAGAGACAGCAACAGAAAACCC 4062
Query 3514 AATTCCAACATCAGAAACTGTAGTCGAAACCCCAAGGGAGATCGAAATTCCAAAGAAACA 3573
|||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4063 AATTCCGACAGCAGAAACTGTAGTCGAAACCCCAAGGGAGATCGAAACTCCAAAGAAACA 4122
Query 3574 AACCGTAGAGGAGAGTCAGCAAATCAAGAAATCTCACAAATCTTCATCACAGTTTCTCAA 3633
|||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||
Sbjct 4123 AACCGTAGAGGAGAGTCAACAAATGAAGAAATCTCACAAACCTTCATCACAGTTTCTGAA 4182
Query 3634 ACAAAACAAGTCAAAATCGGTTCCTCTGCCTTTAAGGAACCGAGGAAGCAAGAGAAAACT 3693
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4183 ACAAAACAAGTCAAAATCGGTTCCTCTGCCTTTAAGAAACCGAGGAAGCAAGAGAAAACT 4242
Query 3694 GCGGCAATGGATGTGGATTGGACTCATAGTTGTGATCATCCTCGCATTGTTCCTTCTCGG 3753
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 4243 GCGGCAATGGATGTGGATTGGACTCATAGTTGTGATCATCATCGCATTGTTCCTTCTCGG 4302
Query 3754 TAATGCCAATCTCTCCTCTCCTGCAAATCTTTGGTTTACATAAGAACaaaaaaa-aaaGA 3812
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 4303 TAATGCCAATCTCTCCTCTCCTGCAAATCTTTGGTTTACATAAGAATAAAAAAAGAAAGA 4362
Query 3813 AGAAGTGGCACACCCTTACACACACTTTGCCTTGTGGTTTTTATAGT-TAtttttttttg 3871
||||||||||||| ||||||||| ||||||||||| |||||||||| | ||||||||||
Sbjct 4363 AGAAGTGGCACACTCTTACACAC--TTTGCCTTGTGCTTTTTATAGTATGTTTTTTTTTG 4420
Query 3872 gctcatctaaattagtttagatttgtgtttggtgcttttattcttttcttttttcttaAG 3931
|||||||||||||||||| |||| ||| ||||||||||||||||||| || ||| | |||
Sbjct 4421 GCTCATCTAAATTAGTTTGGATT-GTGGTTGGTGCTTTTATTCTTTT-TTCTTT-T-AAG 4476
Query 3932 TGGGGAAGCTTTGATTCATTGATTTCACACGAACGACAGACATA--GATTGGTTTTGCTT 3989
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 4477 TGGGGAAGCTTTGATTCATTGATTTCACACGAACGACAGACATATAGATTGGTTTTGCTT 4536
Query 3990 GTTCTGGGTATATGT-T-TAAGAAACACGGTTCCAGttttttattttttt-tAATATACC 4046
| ||||||||||| | | |||||||||||||||||||||||| || |||| |||||||||
Sbjct 4537 GCTCTGGGTATATATGTCTAAGAAACACGGTTCCAGTTTTTT-TTATTTTCTAATATACC 4595
Query 4047 ATAATATATT-ATTAAAGCAATAAACGTCTTCTCATCTTTTATCGAT-G-TATAAAAACT 4103
|||||||||| ||||||||||||| | |||||||||||||| |||| | |||| |||||
Sbjct 4596 ATAATATATTTATTAAAGCAATAA-CTTCTTCTCATCTTTT--CGATTGATATATAAACT 4652
Query 4104 GGTGGAACAGTCTC 4117
||||||| ||||||
Sbjct 4653 GGTGGAAGAGTCTC 4666
Score = 2669 bits (1445), Expect = 0.0
Identities = 1775/1928 (92%), Gaps = 47/1928 (2%)
Strand=Plus/Plus
Query 1 TTCTCGATCTCGTCCTTAATTCC-TCCTTCTCTAAGAAGCCAGCTGTTttcttcttcttc 59
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 16 TTCTCGATCTCGTCCTTAATTCCTTCCTTCTCT---AAGCCAGCTGTTTTCTTCTTCTTC 72
Query 60 ttcttc-t-tct-tc-atctctcgtctcctactctctttcttTGCTCGCACCAAAATTTC 115
|||||| | ||| || ||||||||||||||||||| |||||||||| |||||||||||
Sbjct 73 TTCTTCATCTCTCTCTCTCTCTCGTCTCCTACTCTC--TCTTTGCTCGGACCAAAATTTC 130
Query 116 CTCAAATTCCT-CTTTCGTTAATCGCCGGCATTGTCTTTCTTACCGATCCGACTATCTCA 174
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 131 CTCAAATTCCTCCTCT-GTTAATCGCCGGCATTGTCTTTCTTACCGATCCGACTATCTCA 189
Query 175 GCATTCGAAATCTCTGGCGACAAAGCCTGATCTCAAGATT-CCG-TCGGTGGAAGCTGTG 232
|||||||||||||| |||||||||||||||||||||| || || || || ||||| |||
Sbjct 190 GCATTCGAAATCTCCGGCGACAAAGCCTGATCTCAAGCTTATCGTTC-GT-GAAGCGGTG 247
Query 233 AAAATGCCGGTGGAGGTGGAGAGAGATCAAGGAGAGGTGTCGGTGAAGGTTGATTTTGAG 292
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 248 AAAATGCCGGTGGAGGTAGAGAGAGACCAAGGAGAGGTGTCGGTGAAGGTTGATTTTGAG 307
Query 293 AATGCGACTGAGATTAAACCGGAGGTAGTAATTCCTGCTACCAAAGAGGACGTGGTGAAT 352
||||||||||||||||||||||||||||| || | || |||||||||||||||||||||
Sbjct 308 AATGCGACTGAGATTAAACCGGAGGTAGTTGTTTCGGCCACCAAAGAGGACGTGGTGAAT 367
Query 353 GGGATCAGCGATGG-CG--GTAATAATGGTAACGGAAACGACACCGATGGTTCTTACGTT 409
||||||||| |||| | |||||||||| ||||| ||||| |||||||||||||||| |
Sbjct 368 GGGATCAGCCATGGTGGTAGTAATAATGGCAACGGGAACGATACCGATGGTTCTTACGAT 427
Query 410 TTCATTACGGAGAATGATACCGTAGGAGATGATATTGTAGAGTCTGATTCTGTTAAGCCT 469
||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||
Sbjct 428 TTCATTACGGAGAATGATACCGTTGGAGATGATTTTGTAGAGTCTGATTATGTTAAGCCT 487
Query 470 GTTGATGATGCCAATGTGGAGAAAGATCTTAAGGAAGGAGAGAATGTGAAGGTAGAGGCT 529
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 488 GTTGATGATGCCAATGTGGAGAAAGATCTTAAGGAAGGAGAGAATGTGAAGGTAGATGCT 547
Query 530 ACAAGTATCGCCGATGATGATGTTTTGGGAGTTTCTCAAGATAGTCAAACCCTGGAAAAG 589
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 CCAAGTATTGCCGATGATGATGTTTTGGGAGTTTCTCAAGATAGTCAAACCCTGGAAAAG 607
Query 590 TCTGAACGAGAAAGGACAGATGATGGACCAGAGGAGGTCGTTAG-GATCCCAAAGTCAGA 648
||||| | |||||| |||||||||||||||||||| |||||| | |||||||||||| ||
Sbjct 608 TCTGAGCTAGAAAGTACAGATGATGGACCAGAGGAAGTCGTT-GAGATCCCAAAGTCGGA 666
Query 649 AATTGAGGATTCTCTTGAAAAAAGTGTCGACCAGCAGCATCCTGGTAATGGGCATCTAGA 708
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTTGAGGATTCTCTTGAAAAAAGTGTCGACCAGCAGCATCCTGGTAATGGGCATCTAGA 726
Query 709 AAGTGGGCTTGAGGGTAAAGTGGAATCTAAAGAGGAAGTGGAGCAACTTCAAGATTCTGA 768
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 727 AAGTGGGCTTGAGGGTAAAGTGGAATCTAAAGAGGAAGTGGAGCAACTTCATGATTCTGA 786
Query 769 AGTTGGATCCAGGGATCTGACCAAGATTAACGCAGAGGAAAAGTCTGAAGGTAAAATTGA 828
||||||||||| ||||||||| |||| ||||| ||||| || |||||| | |||| ||
Sbjct 787 AGTTGGATCCAAGGATCTGACAAAGAATAACGTAGAGG---AGCCTGAAGTTGAAATCGA 843
Query 829 ACCTGATAGTAAAACAGATGTGGAGGGACATCGCGGGGACAGGATTGAAGCCCAAGAAAA 888
| |||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||
Sbjct 844 ATCTGATAGTGAAACAGATGTCGAGGGACATCAAGGGGACAAGATTGAAGCCCAAGAAAA 903
Query 889 ATCTGATCTGGATGTGGATG----T-----T-T----C-T-----GAA-GTAGAAAAGCA 927
|||||||| |||| |||||| | | | | | ||| |||||||||||
Sbjct 904 ATCTGATCGGGATTTGGATGTTTCTCAAGATCTAAAACTTAACGAGAATGTAGAAAAGCA 963
Query 928 CCCAGTTGACTCAGATGAAGTAAAAGAGTCTGAGTTGGTGAGCGCTAAGGTTTCTCCAAC 987
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 964 CCCTGTTGACTCAGATGAAGTAAGGGAGTCTGAGTTGGTGAGCGCTAAGGTTTCTCCAAC 1023
Query 988 TGACCCTAGTGATGGAGGCACGGATTTGGGACAACCTACGGTAACAGATCCAGCTGATAC 1047
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1024 TGAGCCTAGTGATGGAGGCATGGATTTGGGACAACCTACGGTAACAGATCCAGCTGAAAC 1083
Query 1048 TATCAATGGATCTGAATCTGTGAATGATCGCATTGGATCAGAATCTGTAGCAGTTTTGGA 1107
|||||||||||||||||||||||||||| | | ||||||||| ||||| ||||||||||
Sbjct 1084 CATCAATGGATCTGAATCTGTGAATGATCACGTCGGATCAGAACCTGTAACAGTTTTGGA 1143
Query 1108 ATCTGTTTCTGTTGAAAACGGTCACCCTCCAATAGAATCAGAGTTGGAGAGAACTAGTGA 1167
| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1144 ACCTGTTTCTGTTGAAAACGGTCACCCTCCAGTAGAATCAGAGTTGGAGAGAAGTAGTGA 1203
Query 1168 TGTTCCATTCCCTTCAGAGGCGGAAAAAGTCAATGCTTCTGATGGTGAGGTGTTGGCAGA 1227
|||||||||| |||||| ||||||||||||||||||||| |||||||| |||||| ||||
Sbjct 1204 TGTTCCATTCACTTCAGTGGCGGAAAAAGTCAATGCTTCCGATGGTGAAGTGTTGCCAGA 1263
Query 1228 CTCTAGAACCGTGGATGTTGCTGTCTCAGAGGTAAGTAGTGATGTCCCGGCTGAGACTCA 1287
|||| ||||||||||||||| ||| ||||||||||| ||||| ||||| |||||||||||
Sbjct 1264 CTCTGGAACCGTGGATGTTGTTGTATCAGAGGTAAGCAGTGACGTCCCTGCTGAGACTCA 1323
Query 1288 AGCTTTTACTGCCATCAGTTTGGATTCCCAGCCTTCTGGCAAAGATAGTGTTGTTGAAAA 1347
|||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 AGCTCTCAATGCCATCAGCTTGGATTCCCAGCCTTCTGGCAAAGATAGTGTTGTTGAAAA 1383
Query 1348 TGGTAATAGCAAATCGGAATCTGAAGACAGCAAGATGCAATCGGAAATTGGAGCTGGTGA 1407
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1384 TGGTAATAGCAAATCAGAATCTGAAGACAGCAAGATGCAATCGGAAATTGGAGCTGTTGA 1443
Query 1408 TGATGTCTCTGTGTCTGATGGGAGTATTAACACTCATCCAGAATCTCAAGATGCCAGTGA 1467
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1444 TGATGGCTCTGTGTCTGATGGGAGTATAAACACTCATCCAGAATCTCAAGATGCCAGCGA 1503
Query 1468 TCCTACTTGTGATCAAGATGGAAAACAACGCATAGCATCTGAAGCTAAGGAAGTTCTTGA 1527
||||||||||||||||| ||||||||||| |||| |||| |||| |||||||||||||||
Sbjct 1504 TCCTACTTGTGATCAAGGTGGAAAACAACACATATCATCCGAAGTTAAGGAAGTTCTTGA 1563
Query 1528 TGCCCTTGCTTTAGAAGAAAGAAGTGATGCTGTTATTGTTGCCAAAGAGAATGTTTCAGA 1587
||||| ||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||
Sbjct 1564 TGCCCCTGCTTCAGAAGAAATAAGTGATGCTGTTATTGTTGCCAAAGATAATGGTTCAGA 1623
Query 1588 AGCTGCTATTTCTGATGGCTTATCTTGTACCAACCAGCAGAGATCAGAAAGTGATGAGAT 1647
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 1624 AGCTGCTATTTCTGATGGCTTATCTTGTACTAACCAGCAGGGATCAGAAAGTGATGAGAT 1683
Query 1648 ATATGGGCTTGTTGAAAAACTCCCATCCCATACGCTACATGAGGTTGCGCCTTCTGGGAA 1707
|| |||||| ||||||||||||||||||||| ||||||||||||||| | |||||| |||
Sbjct 1684 ATCTGGGCTAGTTGAAAAACTCCCATCCCATGCGCTACATGAGGTTGTGTCTTCTGCGAA 1743
Query 1708 TGACACAAGTGTAATTGTAAGCGATGACACCAAAAGTCAAGGTTTATCAGAGGATCATGG 1767
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1744 TGACACGAGTGTAATTGTAAGCGATGACACCAAAAGTCAAGGTTTATCAGAGGATCATGG 1803
Query 1768 AGTTGACACTAACCAGA-AGATTCAAGATGATTGTGGTGCTGAGTTGGAAGAAGTTACCG 1826
||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1804 AGTTGACACTAACCAGACA-ATTCAAGATGATTGTAGTGCTGAGTTGGAAGAAGTTACCG 1862
Query 1827 ATGTGAATGTAAAACATGCTCCAAATGAGAAAGTTCAAGGGGACAACAGCGAGGGGAACT 1886
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1863 ATGTGAATGTAAAACATGCTCCAAATGAGAAAGTTCAAGGAGACAATAGCGAGGGGAACT 1922
Query 1887 TAAATGTT 1894
||||||||
Sbjct 1923 TAAATGTT 1930
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 205182796870
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5