BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472338
Length=4017
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa ... 5336 0.0
AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-lik... 2001 0.0
> AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa
promoter binding protein-like 14 | chr1:7324588-7329385 FORWARD
LENGTH=4014
Length=4014
Score = 5336 bits (2889), Expect = 0.0
Identities = 3413/3654 (93%), Gaps = 84/3654 (2%)
Strand=Plus/Plus
Query 388 GAGGACTTTGAAAAAGGGTCAGACTCAGATCGAAAGAGATGGATGAGGTAGGAGCTCAAG 447
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 417 GAGGACTTTGAAAAAGGGTCAGACTCAGATCGAGAGATATGGATGAGGTAGGAGCTCAAG 476
Query 448 TGGCTGCTCCGATGTTTATTCATC-ATCCGATGGGGAAAAAACGCGATCTTTATTATCCG 506
||||||||||||||||||| |||| || || |||||| ||| || |||||||||||||||
Sbjct 477 TGGCTGCTCCGATGTTTATACATCAAT-CGCTGGGGAGAAAGCGAGATCTTTATTATCCG 535
Query 507 ATATCGAATCGGTTGGTTCCATCTCAG-C-C-GCGTAGTGATGAGTGGAATTCCAAGATG 563
|| |||||||||||||||| ||||||| | | |||||| |||||||||||||| ||||||
Sbjct 536 ATGTCGAATCGGTTGGTTCAATCTCAGCCTCAGCGTAGAGATGAGTGGAATTCGAAGATG 595
Query 564 TGGGATTGGGATAGCCGGAGATTTGAAGCTAAACCGGTGGATGTTGAGGTTCTTCGGTTA 623
||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 596 TGGGATTGGGATAGCCGGAGATTTGAAGCTAAACCGGTGGATGTTGA--------GG-T- 645
Query 624 GGAAATGAGGCACAAGAGTTTGATTTGACTTTGAGGAATAGGATTGGTGAAGAAAGAGGA 683
| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 646 -----T------CAAGAGTTTGATTTGACTTTGAGGAATAGGAGTGGTGAAGAAAGAGGA 694
Query 684 CTTGATTTGAATCTGGGAAGTGGTTTGACCGCTGTGGAAGATTTGACGACGACGACGACG 743
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 695 CTTGATTTGAATCTGGGAAGTGGTTTGACTGCTGTGGAAGA---GACGACGACGACGACG 751
Query 744 CAGAACGTTAGACCGAACAAGAAGGTTCGGTCTGGATCTCCGGGAGGGAATTATCCCATC 803
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 CAGAACGTTAGACCGAACAAGAAGGTTCGGTCTGGATCTCCGGGAGGGAATTATCCCATG 811
Query 804 TGTCAGGTGGATAATTGTACTGAAGATTTGTCTCATGCTAAGGATTATCATAGAAGGCAT 863
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 TGTCAGGTTGATAATTGTACTGAAGATTTGTCTCATGCTAAGGATTATCATAGAAGGCAT 871
Query 864 AAAGTTTGTGAAGTTCATAGCAAAGCTACTAAAGCTCTTGTTGGGAAACAGATGCAGAGG 923
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 872 AAAGTTTGTGAAGTTCATAGTAAAGCTACTAAAGCTCTTGTTGGTAAACAGATGCAGAGG 931
Query 924 TTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTTTGATGAGGGAAAGAGAAGT 983
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 932 TTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTTTGATGAGGGGAAGAGAAGT 991
Query 984 TGTAGGCGTAGATTGGCTGGCCATAACCGACGTAGGAGGAAAACTACGCAGCCGGAGGAG 1043
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 992 TGTAGGCGTAGATTGGCTGGCCATAATCGACGGAGGAGGAAAACTACGCAGCCGGAGGAG 1051
Query 1044 GTTGCATCTGGGGTTGTGGTTCCGGGGAACCGTGATAATATTAATAATACCTCTACCGCC 1103
||||||||||||||||||||||||||||||| ||||| || ||| ||||| ||| ||||
Sbjct 1052 GTTGCATCTGGGGTTGTGGTTCCGGGGAACCATGATACTACTAACAATACGGCTAACGCC 1111
Query 1104 AATATGGATCTTATGGCTTTGTTAACTGCCTTAGCTTGTGCACAAGGTAAGAATGCGGTA 1163
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1112 AATATGGATCTTATGGCTTTGTTAACCGCCTTAGCTTGTGCACAAGGTAAGAATGCGGTA 1171
Query 1164 AAG---CCAGTGGGGTCTCCAGCTGTGCCTGATAGAGAGCAGCTTCTTCAGATACTTAAC 1220
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 AAGCCCCCAGTGGGATCTCCAGCTGTGCCTGATAGAGAGCAGCTTCTTCAGATACTTAAC 1231
Query 1221 AAGATAAATGCATTGCCTTTGCCTATGGATCTTGTCTCTAAGTTGAACAATATTGGAAGT 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 AAGATAAATGCATTGCCTTTGCCTATGGATCTTGTCTCTAAGTTGAACAATATTGGAAGT 1291
Query 1281 TTAGCAAGGAAAAATATGGATAACCCAACGGTGAACCCCCAAAATGATATGAATGGGGCT 1340
||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||
Sbjct 1292 TTAGCCAGGAAAAATATGGATCACCCGACGGTGAACCCACAAAATGATATGAATGGGGCT 1351
Query 1341 TCTCCTTCTACCATGGACTTGCTTGCTGTTCTTTCAACAACGTTAGGCTCATCTTCACCT 1400
||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct 1352 TCTCCTTCTACCATGGACTTGCTTGCTGTTCTTTCGACGACATTAGGTTCATCTTCACCT 1411
Query 1401 GATGCACTAGCCATATTATCTCAAGGTGGGTTTGGTAACAAAGACAGCGAGAAGACTAAG 1460
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 GATGCACTAGCGATATTATCTCAAGGTGGGTTTGGTAACAAAGACAGCGAGAAGACTAAG 1471
Query 1461 TTATCTTCTTATGAACACGGTGTAACAACCAATTTGGAAAAGAGAACTTTTGGGTTTTCT 1520
||||| ||||||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1472 TTATCGTCTTATGAAAATGGTGTTACAACCAACTTGGAAAAGAGAACTTTTGGGTTTTCT 1531
Query 1521 TCTGTTGGGGGAGAGAGGAGCAGTAGCAGTAACCAATCTCCTTCTCAGGATTCAGATTCA 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1532 TCTGTTGGGGGAGAGAGGAGCAGTAGCAGTAACCAATCTCCTTCTCAGGATTCTGACTCA 1591
Query 1581 CGTGGTCAAGACACTAGGTCTAGCTTGTCTCTACAACTATTCACCTCATCACCTGAGGAT 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1592 CGTGGTCAAGACACTAGGTCTAGCTTGTCTCTACAACTATTCACCTCATCACCCGAGGAT 1651
Query 1641 GAGAGTCGACCGACAGTGGCATCTTCTAGAAAGTATTATTCTTCTGCCAGCAGTAATCCT 1700
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1652 GAGAGTCGACCGACAGTAGCATCTTCTAGAAAGTATTATTCTTCTGCCAGCAGTAATCCT 1711
Query 1701 GTTGAGGATAGATCGCCATCTTCCTCTCCGGTCATGCAGGAGTTATTCCCATTGCAGACA 1760
|| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||
Sbjct 1712 GTGGAGGATAGATCACCATCTTCTTCTCCGGTCATGCAGGAGTTATTCCCCTTGCAGGCA 1771
Query 1761 TCCCCTGAAACCATGAGGTCTAAGAATCACAATAACACAAGTCCCAGGAGTGGTTGCTTG 1820
|||||||||||||||||||| |||||||| || ||| |||||||||||| ||||||||||
Sbjct 1772 TCCCCTGAAACCATGAGGTCCAAGAATCATAAAAACTCAAGTCCCAGGACTGGTTGCTTG 1831
Query 1821 CCCCTTGAGCTCTTTGGTGCATCGAATAGAGGAACTGCAAATCCTAATTTTAAAGGTTTC 1880
||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct 1832 CCCCTTGAGCTCTTTGGTGCATCGAATAGAGGAGCTGCAGATCCTAACTTTAAAGGTTTC 1891
Query 1881 GGGCAACAGTCTGGTTATGCTTCTTCTGGCTCTGACTACTCTCCTCCTAGCTTAAACTCT 1940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 GGGCAACAGTCTGGTTATGCTTCTTCTGGCTCTGACTACTCTCCTCCTAGCTTAAACTCT 1951
Query 1941 GATGCTCAGGACCGCACTGGAAAGATAGTCTTCAAACTACTTGATAAAGATCCAAGTCAG 2000
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1952 GATGCTCAGGACCGCACTGGAAAGATAGTCTTTAAACTACTTGATAAAGATCCAAGTCAG 2011
Query 2001 CTCCCTGGGACAT-TACGATCTGAGATCTATAACTGGCTTTCGAACATTCCATCAGAAAT 2059
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2012 CTCCCTGGGAC-TCTACGATCTGAGATCTATAACTGGCTTTCGAACATTCCATCAGAAAT 2070
Query 2060 GGAGAGTTATATCAGGCCTGGCTGTGTTGTTCTATCTGTTTATGTAGCGATGTCACCTGC 2119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2071 GGAGAGTTATATCAGGCCTGGCTGTGTTGTTCTATCTGTTTATGTAGCAATGTCACCTGC 2130
Query 2120 AGCCTGGGAACAACTCGAGCAAAACTTGCTGCAACGGCTTGGTGTTTTGCTACAAAATTC 2179
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2131 AGCCTGGGAACAACTTGAGCAAAAATTGCTGCAACGGCTTGGTGTTTTGCTACAAAATTC 2190
Query 2180 TCCTTCTGATTTTTGGAGAAACGCGAGATTTATAGTTAACACGGGCAGGCAGCTCGCATC 2239
|||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct 2191 TCCTTCTGATTTTTGGAGAAACGCAAGATTTATAGTTAACACGGGAAGACAACTCGCATC 2250
Query 2240 ACACAAAAATGGTAAAGTTCGATGTAGCAAATCTTGGAGAACTTGGAATTCACCAGAGCT 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2251 ACACAAAAATGGTAAAGTTCGATGTAGCAAATCTTGGAGAACTTGGAATTCACCAGAGCT 2310
Query 2300 CATCTCAGTATCACCTGTAGCTGTGGTAGCTGGTGAAGAAACAAGTTTGGTTGTAAGAGG 2359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2311 CATCTCAGTGTCACCTGTAGCTGTGGTAGCTGGTGAAGAAACAAGTTTGGTTGTAAGAGG 2370
Query 2360 GAGAAGCTTGACTAACGAGGGAATCAGTATTCGCTGCACACATATGGGTAGCTACATGTC 2419
||||||||||| || || |||||||||||||| |||||||||||||||||||||||| |
Sbjct 2371 TAGAAGCTTGACGAATGATGGAATCAGTATTCGTTGCACACATATGGGTAGCTACATGGC 2430
Query 2420 AATGGAGGTAACCGGGGCAGTGTGTAGAGAAGCCATATTTGACAAGTTGAATGTAGATAG 2479
||||||||||||| |||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct 2431 AATGGAGGTAACCAGGGCAGTGTGTAGACAAACCATATTTGACGAGTTGAATGTAAATAG 2490
Query 2480 TTTCAAAGTCCAAAATGTACACCCTGGTTTTCGTGGACGCTGTTTCATTGAGGTGGAGAA 2539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2491 TTTCAAAGTCCAAAATGTACACCCTGGTTTTCTTGGACGCTGTTTCATTGAGGTGGAGAA 2550
Query 2540 TGGATTCAGGGGTGACAGTTTTCCATTGATTATTGCCAATGAATCCATCTGCAAAGAGTT 2599
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 2551 TGGATTCAGGGGTGACAGTTTTCCATTGATAATTGCCAATGCATCCATCTGCAAAGAGTT 2610
Query 2600 AAATCGCCTCGAAGAAGAGTTTCACCCCAAAAGTCAAGATATGACAGAAGAACCAGCGCA 2659
||||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 2611 GAATCGTCTCGGAGAAGAGTTTCACCCCAAAAGTCAAGATATGACAGAAGAGCAAGCGCA 2670
Query 2660 GAGCTCAAATCGCAGTCCCACGTCAAGAGAAGAAGTTTTGTGCTTCTTGAACGAGCTTGG 2719
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2671 GAGCTCAAATCGTGGTCCCACATCAAGAGAAGAAGTTTTGTGCTTCTTGAACGAGCTTGG 2730
Query 2720 TTGGCTTTTCCAGAAGAACCAGACCTCTCAGCCTCGGGAACAATCCGACTTTTCCCTTGC 2779
|||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||
Sbjct 2731 TTGGCTTTTCCAGAAGAATCAGACCTCTGAGCTTCGGGAACAATCTGACTTTTCCCTTGC 2790
Query 2780 CCGCTTCAAGTTTTTACTTGTTTGCTCGGTTGAAAGAGATTACTGTGCTCTCATCAGAAC 2839
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2791 CCGCTTCAAGTTTTTGCTAGTTTGCTCAGTTGAAAGAGATTACTGTGCTCTCATCAGAAC 2850
Query 2840 ACTCCTCGACATGTTGGTAGAGAGAAATTTGGTGAATGATGAGCTGAACAGAGAAGCCTT 2899
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2851 GCTCCTCGACATGTTAGTAGAGAGAAATTTGGTGAATGATGAGCTGAACAGAGAAGCCCT 2910
Query 2900 GGAAATGCTCGCCGAGATTCAGTTGTTGAATCGTGCTGTTAAGAGGAAAAGCACAGAAAT 2959
||| ||||| || |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2911 GGATATGCTTGCTGAGATTCAGTTGTTGAATCGTGCTGTTAAGAGGAAAAGCACAAAAAT 2970
Query 2960 GGTTGAACTACTCATTCATTAC-TCGGTTAATCCCTC-AGCACTCAGTTCCTCCAAAAAG 3017
||| |||||||||||||||||| | |||||| |||| | ||||||||||||||| ||||
Sbjct 2971 GGTCGAACTACTCATTCATTACCT-GGTTAACCCCTTGA-CACTCAGTTCCTCCAGAAAG 3028
Query 3018 TTCGTTTTCTTACCCAATATAACTGGACCTGGCGGTATCACACCTTTACATCTAGCTGCT 3077
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3029 TTCGTTTTCTTACCTAATATAACTGGACCTGGCGGTATCACACCTTTACATCTAGCTGCA 3088
Query 3078 TGTACATCTGGTTCAGATGCTATGATTGATCTACTCACCAATGATCCACAAGAGATCGGA 3137
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 3089 TGTACATCTGGTTCAGATGATATGATTGATCTACTCACCAATGATCCACAAGAGATTGGA 3148
Query 3138 TTATCGAGCTGGAACACTCTTTGCGATGCAACCGGGCAAACTCCATACAGCTACGCTGCA 3197
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3149 TTATCGAGCTGGAACACTCTTCGCGATGCAACCGGGCAAACTCCATACAGCTACGCTGCA 3208
Query 3198 ATGAGGAACAACCATAACTATAACTCATTGGTGGGTCGTAAACTTGCAGATAAAAGAAAC 3257
|| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 3209 ATAAGGAACAACCATAACTATAACTCATTGGTGGCTCGTAAACTTGCAGACAAAAGAAAC 3268
Query 3258 AGGCAAGTCTCGCTAAACATCGAGCACGAGATAGTTGACCAAACCGGTCTGAGCAAGAGA 3317
| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3269 AAGCAAGTCTCACTAAACATCGAGCACGAGGTAGTTGACCAAACCGGTCTGAGCAAGAGA 3328
Query 3318 CTAAGTTCAGAGATGAACAAGTCATCATC-T-T-GTGCCTCGTGTGCAACCGTGGCTCTA 3374
|||||| ||||||||||||||||||||| | | |||||||||||||||| |||||| |
Sbjct 3329 TTAAGTTTAGAGATGAACAAGTCATCATCATCTTGTGCCTCGTGTGCAACGGTGGCTTTG 3388
Query 3375 AAGTATCAAAAAAGAGTTTCAAATTCACACCGATTGTTCCCAACTCCTATCATTCACTCA 3434
|||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||
Sbjct 3389 AAGTATCAAAGGAGAGTTTCAGGTTCACAACGTTTGTTCCCAACTCCTATCATTCACTCA 3448
Query 3435 ATGCTTGCGGTTGCAACGGTCTGCGTTTGCGTCTGCGTTTTCATGCACGCTTTCCCAATC 3494
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3449 ATGCTTGCGGTTGCAACGGTCTGCGTTTGCGTCTGCGTTTTCATGCATGCTTTCCCAATC 3508
Query 3495 GTCAGACAAGGTTCTCACTTCAGTTGGGGAGGTTTGGATTATGGCTCAATCTAGAGAAAT 3554
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3509 GTCAGACAAGGGTCTCACTTCAGTTGGGGAGGTTTGGATTATGGCTCAATCTAGAGAACT 3568
Query 3555 ATACTATATAAA--T-T-ATAATTTATTCTTTTGGTTTCACAAAGACAAAACaaaaaaaT 3610
|||||||||||| | | ||||||||||||||||||||| | ||||||||| ||||| |
Sbjct 3569 ATACTATATAAAAGTATTATAATTTATTCTTTTGGTTTCTCGAAGACAAAA-AAAAA--T 3625
Query 3611 AAGTAAAAGAGAAGAGACTCTGGTACGGATATAAGGAGAAGCTCAGAGACATGACTGTGA 3670
||| ||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||
Sbjct 3626 AAGAAAAAGAGAAGAGACTTTGGTACAAATAGAAGGAAAAGCTCAGAGACATGACTGTGA 3685
Query 3671 CACACGACCAAA-GTGACTGCAGTATTTACTCGAGGGAGTTTCACCGTCGGGA-Gttttt 3728
|||||||||||| |||||| ||||||| |||||||| |||||||||||||||| ||||||
Sbjct 3686 CACACGACCAAAAGTGACTACAGTATT-ACTCGAGGAAGTTTCACCGTCGGGATGTTTTT 3744
Query 3729 tttttttttCTGTCTTCGATTATATATAT-TTT-GGTTTGGCTAATTTGTTGTGTATTTC 3786
| ||| ||||| | | | ||||||||||| ||| ||||| ||||||||||| |
Sbjct 3745 TCTTTCTTTCT-T-T-CAATTATATATATATTTTGGTTTTGCTAATTTGTT--------C 3793
Query 3787 TGTGTATTTCCTTCTACATTTTCCTACTTTCTATGattattattattattattTTAACTA 3846
||| |||||||| ||| ||| |||||||| ||||||||||||| ||| | |||
Sbjct 3794 TGT--ATTTCCTTGTACGTTT-CCTACTTTTTATGATTATTATT-TTA--A------CTA 3841
Query 3847 AGATAATAACATGCTGCTTCATATAAGAAGCAgttgtttt-actgttttgtttttttg-t 3904
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
Sbjct 3842 AGATAATAACATGCTGCTTCATATAAGAAGCAGTTGTTTTTA-TGTTTTGTTTTTTTGGT 3900
Query 3905 tctttg-tctttgtaaatttgtactttgtACAAGTAGTTCTCTTGTTGTAACTTCAAGAA 3963
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3901 TCTTTTATCTTTGTAAATTTGTACTTTGTACAAGTAGTTCTCTTGTTGTAACTTTAAGAA 3960
Query 3964 TTTATGTAACTTTGTTGTTTCTTATTCTCGCAAGTCTAAATGCATAACCATTTT 4017
|||||||| || || || |||||||||| ||||| |||||||||||||||||
Sbjct 3961 ATTATGTAA-TTC-TT-TT-CTTATTCTCGAAAGTCAAAATGCATAACCATTTT 4010
Score = 435 bits (235), Expect = 2e-120
Identities = 345/394 (88%), Gaps = 23/394 (6%)
Strand=Plus/Plus
Query 1 TAAGGACTTGAAGACAGCAGAGAGAGACCAAGGAGAAGaaaaagaaaaaaaaaaaaGCTT 60
|||||||||||||||| | ||||||||| | | | |||| |||||| |||||||||
Sbjct 2 TAAGGACTTGAAGACATC----AGAGACCAA-G-G-ACCAAAA-AAAAAAGAAAAAGCTT 53
Query 61 T-ATCAGAAGACGAAGAAGAAGAAGGACAAAGTTTGAGACTTTGTAAGATTTGAAGAAG- 118
| || | | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 54 TGAT--TACCA-GAAGAAGAAGAAGGACAAAGTTTGAGACTTTGGAAGATTTGAAGAAGG 110
Query 119 ATAGCTCGAAGCTGGTGAGGAGAGAAG-TCAAGTCCTTT-CTCTT-GTGTCCTTGATTAG 175
| ||||| |||||||||||||||||| |||| |||||| ||||| || ||||||||| |
Sbjct 111 A-AGCTCTAAGCTGGTGAGGAGAGAAAATCAAATCCTTTTCTCTTAGTTTCCTTGATTGG 169
Query 176 ATCGGGAAA-TCTACAAGTTGAAAGATTCGttttttttGTAAATCATTTCGAATCTGAAC 234
||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 170 ATCGGGAAAATCTACAAGTTGAAAGATTCGTTTTTT--G-AAATCATTTCGAATCTGAAC 226
Query 235 ATTCGATTTCTG-GTCATGTTTTGCCTGATTCGTCTCGAGCTTTCGTTGAATCGAAGAAG 293
|||||||||| | |||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct 227 ATTCGATTTC-GAGTCATGTTTTGCTTGATTTGTCTTAAGCTTTCGTTGAATCGAAGAAG 285
Query 294 AGTTTATGCTTGAAAGCTCCGATTTTGTGTTTACTTATTAGCTAAGAGGTAGATCTGTTG 353
|||||||||||||||||| ||||||||||||||| |||||||||||| ||||| || ||
Sbjct 286 CGTTTATGCTTGAAAGCTCAGATTTTGTGTTTACTGATTAGCTAAGAGTTAGATATGATG 345
Query 354 AGTAGGTACGTTGGTTCGTTCCTCAGCTAGAGAT 387
||||| |||||||||||||||||| ||||||||
Sbjct 346 AGTAGCTACGTTGGTTCGTTCCTCCCCTAGAGAT 379
> AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-like
(SBP domain) transcription factor family protein | chr1:28734234-28738917
FORWARD LENGTH=3686
Length=3686
Score = 2001 bits (1083), Expect = 0.0
Identities = 2277/2833 (80%), Gaps = 163/2833 (6%)
Strand=Plus/Plus
Query 786 GGAGGGAATTATCCCATCTGTCAGGTGGATAATTGTACTGAAGATTTGTCTCA-TGCTAA 844
||||| || ||||| | |||||||| |||||||||| |||||||| || | ||||||
Sbjct 479 GGAGGAAACTATCCGAAGTGTCAGGTTGATAATTGTAAGGAAGATTTATC-AATTGCTAA 537
Query 845 GGATTATCATAGAAGGCATAAAGTTTGTGAAGTTCATAGCAAAGCTACTAAAGCTCTTGT 904
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 538 GGATTATCATAGAAGACATAAAGTTTGTGAGGTTCATAGCAAAGCTACTAAAGCTCTTGT 597
Query 905 TGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTT 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTT 657
Query 965 TGATGAGGGAAAGAGAAGTTGTAGGCGTAGATTGGCTGGCCATAACCGACGTAGGAGGAA 1024
||||||||| ||||||||||||||||||||||||| ||| |||||| | || ||||| ||
Sbjct 658 TGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGATGGTCATAACAGGCGGAGGAGAAA 717
Query 1025 AACTACGCAGCCGGAGGAGGTTGCATCTGGGGTTGTGGTTCCGGGGAACCGTGATAATA- 1083
||| || |||| || | | || ||||| |||||| | || || ||| ||||||||||
Sbjct 718 AAC-AC--AGCCCGATGCGATTACATCTCAGGTTGTAGCTCTGGAGAATCGTGATAATAC 774
Query 1084 TTAATAATACCTCTACCGCCAATATGGATCTTATGGCTTTGTTAACTGCCTTAGCTTGTG 1143
|| ||||| | ||| | ||||||| |||||||||||||||| || |||| |||||
Sbjct 775 TTC-TAATAACACTA-----A-TATGGATGTTATGGCTTTGTTAACAGCTTTAGTTTGTG 827
Query 1144 CACAAGGTAAGAATGCGG-TAA-AGCCAGTGGGGTCTCCAGCTGTGCCTGATAGAGAGCA 1201
||||||||| ||| | || || | | | |||| ||||| | |||||| | ||||||||
Sbjct 828 CACAAGGTAGGAACGAGGCTACTA-CTAATGGG-TCTCCGGGAGTGCCTCAAAGAGAGCA 885
Query 1202 GCTTCTTCAGATACTTAACAAGATAAATGCATTGCCTTTGCCTATGGATCTTGTCTCTAA 1261
||||||||||||||||||||||| || || || |||||||||||| ||||| ||| ||
Sbjct 886 ACTTCTTCAGATACTTAACAAGATCAAGGCTTTACCTTTGCCTATGAATCTTACCTCGAA 945
Query 1262 GTTGAACAATATTGGAAGTTTAGCAAGGAAAAATATGGAT-AACCCAACG-G-TGAACCC 1318
|||||||||||| |||| |||||| ||||||||| ||| ||||| | | |||| ||
Sbjct 946 GTTGAACAATATCGGAATTTTAGCCAGGAAAAATCCGGAGCAACCCTCCCCGATGAATCC 1005
Query 1319 CCAAAAT-GATATGAATGGGGCTTCTCCT---TCTACCATGGACTTGCTTGCTGTTCTTT 1374
|||||| | |||||||||||||||| || ||||| |||||||||||||||| ||| |
Sbjct 1006 TCAAAATAG-TATGAATGGGGCTTCTTCTCCATCTACGATGGACTTGCTTGCTGCTCTCT 1064
Query 1375 CAACAACGTTAGGCTCATCTTCACCTGATGC-ACTAGCCATATTATCTCAAGGTGGGTTT 1433
| || | ||||| |||||| | || || || | |||| | ||||||||||| ||||||
Sbjct 1065 CGGCATCTTTAGGTTCATCTGCTCCAGAGGCCA-TAGCTTTTTTATCTCAAGGAGGGTTT 1123
Query 1434 GGTAACAAAGACAGCGA-GA-AG-ACTAAGTTATCTTCTTATGAACACGGTGTAACAACC 1490
||||||||||| ||| | || || ||||||||| |||||| ||| ||| | | ||||||
Sbjct 1124 GGTAACAAAGAAAGCAATGATAGGACTAAGTTAACTTCTTCTGACCACAGCGCCACAACC 1183
Query 1491 AATTTGGAAAAGAGAACTTTTGG-GTTTTCTTCTGTTGGGGGAG-AGAG-G-AGCA-GTA 1545
| ||| ||||||| |||||| || |||| ||||| ||||||||| |||| | | || |||
Sbjct 1184 AGTTTAGAAAAGAAAACTTT-GGAGTTTCCTTCTTTTGGGGGAGGAGAGAGGA-CAAGTA 1241
Query 1546 GCAGTAACCAATCTCCTTCTCAGGATTCAGATTCACGTGGTCAAGACACTAGGTCTAGCT 1605
||| |||||| ||||| |||||| ||||||||||||| |||||||||||||| || ||||
Sbjct 1242 GCACTAACCATTCTCCATCTCAGTATTCAGATTCACGCGGTCAAGACACTAGATCGAGCT 1301
Query 1606 TGTCTCTACAACTATTCACCTCATCACCTGAGGATGAGAGTCGACCGACAGTGGCATCTT 1665
| |||||||||||||||||||| ||||| || || ||||||||||| | ||| |||||||
Sbjct 1302 TATCTCTACAACTATTCACCTCTTCACCAGAAGAGGAGAGTCGACCAAAAGTTGCATCTT 1361
Query 1666 CTAGAAAGTATTATTCTTCTGCCAGCAGTAATCCTGTTGAGGATAGATCGCCATCTTCCT 1725
| | |||||||||||||||||| |||||||| ||||||||||||||||| ||||| || |
Sbjct 1362 CAACAAAGTATTATTCTTCTGCGAGCAGTAACCCTGTTGAGGATAGATCACCATCATCAT 1421
Query 1726 CTCCGGTCATGCAGGAGTTATTCCCATTGCAGACATCCCCTGAAACCATGAGGTCTAAGA 1785
|||| |||||||| ||||||||||| ||||| || || |||||||||| ||||| ||| |
Sbjct 1422 CTCCAGTCATGCAAGAGTTATTCCCTTTGCATACTTCTCCTGAAACCAGGAGGTATAACA 1481
Query 1786 ATCACAATA-ACAC-A--A---GTCCCAGGAGTGGTTGCTTGCCCCTTGAGCTCTTTGGT 1838
|| |||| | |||| | | ||||||||| |||| |||||||| ||||||||||||
Sbjct 1482 ATTACAA-AGACACTAGTACCAGTCCCAGGACCAGTTGTTTGCCCCTAGAGCTCTTTGGT 1540
Query 1839 GCATCGAATAGAGGA---ACTGCAAATCCTAATTTTAAAGGTTTCG-GGCAACAGTCTGG 1894
||||| ||||||||| |||||||||||||||| || | ||| | |||| || |||||
Sbjct 1541 GCATCAAATAGAGGAGCTACTGCAAATCCTAATTACAATGTTTT-GAGGCATCAATCTGG 1599
Query 1895 TTATGCTTCTTCTGGCTCTGACTACTCTCCTCCTAGCTTAAACTCTGATGCTCAGGACCG 1954
||||||||| ||||| || || || ||||||||||||||||||||| |||||||||| ||
Sbjct 1600 TTATGCTTCATCTGGTTCGGATTATTCTCCTCCTAGCTTAAACTCTAATGCTCAGGAGCG 1659
Query 1955 CACTGGAAAGATAGTCTT-CAAACTACTTGATAAAGATCCAAGTCAGCTCCCTGGGACAT 2013
||| ||||||||| |||| ||||||| |||| |||||||| |||||||||||| ||||
Sbjct 1660 CACAGGAAAGATA-TCTTTCAAACTATTTGAAAAAGATCCTAGTCAGCTCCCTAACACAT 1718
Query 2014 TACGATCTGAGATCTATA-ACTGGCTTTCGAACATTCCATCAGAAATGGAGAGTTATATC 2072
| ||| | ||||||| || | |||||||| | |||||||||| |||||||||| ||||
Sbjct 1719 TGCGAACCGAGATCTTTAGA-TGGCTTTCTAGTTTTCCATCAGATATGGAGAGTTTTATC 1777
Query 2073 AGGCCTGGCTGTGTTGTTCTATCTGTTTATGTAGCGATGTCACCTGCAGCCTGGGAACAA 2132
|||||||| |||||| || ||||||| ||||| || |||||| || | || |||||||||
Sbjct 1778 AGGCCTGGTTGTGTTATTTTATCTGTCTATGTGGCAATGTCAGCTTCTGCTTGGGAACAA 1837
Query 2133 CTCGAGCAAAACTTGCTGCAACG-GCTTGG-TGTTTTGCTACAAAATTCTCCTTCTGATT 2190
|| ||| |||| || |||||||| | || | | ||| | | ||| |||| || |
Sbjct 1838 CTTGAGGAAAATTTACTGCAACGAG-TTAGATCTTTGGTT-CAAGATTCA------GAAT 1889
Query 2191 TTTGGAGAAACGCGAGATTTATAGTTAACACGGGCAGGCAGCTCGCATCACACAAAAATG 2250
||||||| || | |||||| | || || | ||||| |||||||| ||||||||| |||
Sbjct 1890 TTTGGAGTAATTCAAGATTTTTGGTCAATGCAGGCAGACAGCTCGCGTCACACAAACATG 1949
Query 2251 GTA-AAGTTCGA-TGTAGCAAATCTTGGAGAACTTGGAATTCACCAGAGCTCATCTCAGT 2308
||| || |||| || ||||||||||||||||||| ||||| ||||||||| ||| | ||
Sbjct 1950 GTAGAA-TTCGTCTG-AGCAAATCTTGGAGAACTTTGAATTTACCAGAGCTAATCACGGT 2007
Query 2309 ATCACCTGTAG-CTGTGGTAGCTGGTGAAGAAACAAG-TTTGGTTGTAAGAGGG-AGAAG 2365
|| || || | |||| ||||| |||||||||||| | ||| | ||||| ||| ||||
Sbjct 2008 GTCGCC-GTTGGCTGTTGTAGCCGGTGAAGAAACA-GCTTTAATAGTAAG-GGGTAGAAA 2064
Query 2366 CTTGACTAACGAGGGAATCAGTA-TTCGCTGCACACATATGGGTAGCTACATGTCAATGG 2424
||||||||| || ||||| || | |||| ||| |||||||||||| |||| ||||||||
Sbjct 2065 CTTGACTAATGACGGAATGAG-ACTTCGTTGCGCACATATGGGTAACTACGCGTCAATGG 2123
Query 2425 AGGTAACCGGG-GCAGTGTGTAGAG--AAGCCATATTTGACAAGTTGAATGTA-GATAGT 2480
||||||| || | || ||| | || | | | |||| |||| || ||| | ||||
Sbjct 2124 AGGTAACTGGAAG-AGAACATAG-GTTAA-CAAAAGTTGATGAGTTAAACGTAAG-TAGT 2179
Query 2481 TTCAAAGTCCAAAATGTACACC-CTGGTTT-TCGT-GGACGCTGTTTCATTGAGGTGGAG 2537
||| ||||||| | || | | | ||| ||| || | ||||| |||||||||||| |||||
Sbjct 2180 TTCCAAGTCCAGAGTGCA-AGCTCTG-TTTCTC-TAGGACGATGTTTCATTGAGTTGGAG 2236
Query 2538 AATGGATTCAGGGGTGACAGTTTTCCATTGATTATTGCCAATGA-ATCCATCTGCAAAGA 2596
|||||||| || ||||||| ||| || ||||| || ||||||| | | || ||||||||
Sbjct 2237 AATGGATTAAGAGGTGACAATTTCCCTTTGATAATAGCCAATGCCA-CGATTTGCAAAGA 2295
Query 2597 GTTAAATCGCCTCGAAGAAGAGTTTCACCCCAAAAGTCAAGATATGACAGAAGAACCAGC 2656
||| |||||||| |||||||||||||| || ||||| | |||| || ||| || | |
Sbjct 2296 GTTGAATCGCCTTGAAGAAGAGTTTCATCC-AAAAGACGTGATA-GAG-GAACAAATA-C 2351
Query 2657 GCAGAGCTCAAATCGCAGTCCCACG-TCAAGAGAAGAAGTT-TTGTGCTTCTTGAACGAG 2714
||| || | |||| ||| | | ||||||||||||||| || ||||||||||| |||
Sbjct 2352 --AGAACTTAGATCG---TCCAA-GATCAAGAGAAGAAGTTCTT-TGCTTCTTGAATGAG 2404
Query 2715 CTTGGTTGGCT-TTTCCAGAAGAACCAGACCTCTC-AGCCTCG-GGAACAATCCGACTTT 2771
||||||||||| |||| ||| ||| ||| || | | || ||| || ||||||||
Sbjct 2405 CTTGGTTGGCTATTTC-AGAGGAAATGGACATC-CGATATTCATGGAG-AACCCGACTTT 2461
Query 2772 TCCCTTGCC-CGCTTCAAGTTTTTACTTGTTTGCTCGGTTGAAAGAGATTACTGTGCTCT 2830
|| ||| || |||||||| ||||| || || ||||| |||||||||||||||||| ||||
Sbjct 2462 TCTCTT-CCTCGCTTCAAATTTTTGCTCGTATGCTCTGTTGAAAGAGATTACTGTTCTCT 2520
Query 2831 CATCAGAACAC-TCCTCGACATGTTGGTAGAGAGAAATTTGGTGAAT-GATGAG-CTG-- 2885
||| ||||| | |||| || ||| |||||||||||||||||| ||| || | | |||
Sbjct 2521 CATAAGAAC-CGTCCTGGATATGATGGTAGAGAGAAATTTGG-GAAAAGACG-GTCTGTT 2577
Query 2886 -AACAGAGAAG-CCTTGGAAATGCTCGCCGAGATTCAGTTGTTGAATCGTGCTGTTAAGA 2943
|||| || || |||| || ||||| || || |||||| | ||||||| ||| | || |
Sbjct 2578 GAACA-AGGAGTCCTTAGATATGCTGGCTGATATTCAGCTACTGAATCGCGCTATCAAAA 2636
Query 2944 GGA-AAAGCACAGAAATGGTTGAA-CTACTCATTCATTACTCGGTTAATCCCTCAGCACT 3001
||| ||| |||| |||||| |||| || || || ||||| || ||||||||||| |||
Sbjct 2637 GGAGAAA-CACAAAAATGGCTGAAACT-CTGATCCATTATTCCGTTAATCCCTCT--ACT 2692
Query 3002 CAGTTCCTCCAAAAAGTTCGTTTTCTTACCCAATATAACTGGACCTGGCGGTATCACACC 3061
|| ||| ||| | ||||| || | ||| |||||||||||| |||||||||
Sbjct 2693 -AG-------AAAC--TTCATCTTCTTGCCTAGTATCGCTGGACCTGGCGATATCACACC 2742
Query 3062 TTTACATCTAGCTGCTTGTACATCTGGTTCAGATGCTATGATTGAT-CTACTCACCAATG 3120
||| ||| | ||||||| |||||| |||| |||| |||||||||| | || || ||||
Sbjct 2743 TTTGCATTTGGCTGCTTCCACATCTAGTTCTGATGATATGATTGATGCC-CTGACTAATG 2801
Query 3121 ATCCACAAGAGATCGGATTATCGAGCTGGAACACTCTT-TGCGATGCAACCGGGCAAACT 3179
||||||||||||| |||||||| ||||||| || || | |||||||||||||||||||
Sbjct 2802 ATCCACAAGAGATTGGATTATCTTGCTGGAATACCCTAGT-CGATGCAACCGGGCAAACT 2860
Query 3180 CCATACAGCTACGCTGCAATGAG-GAACAACCATAACTATAACTCATTGGTGGGTCGTAA 3238
|| | ||||||||||||||||| || |||||| | || ||| | ||||||| ||||||
Sbjct 2861 CCCTTTAGCTACGCTGCAATGAGAGA-CAACCACAGTTACAACACCTTGGTGGCTCGTAA 2919
Query 3239 ACTTGCAGATAAAAGAAACAGG-CAAGTCTCGCTAAACATCGAGCACGAGATAGTTGACC 3297
||||||||||||||||||| || ||| | || || ||||| || | | ||| | | |
Sbjct 2920 ACTTGCAGATAAAAGAAAC-GGTCAAATATCTCTGAACATTGAAAATGGGATCGAT--C- 2975
Query 3298 AAACCGGTCTGAGCAAGAGACTAAGTTCAGAGATGAACAAGTCATCATCTTGTGCCTCGT 3357
| | || ||||| ||||||||||| |||||| | || | | | |||||| | | |
Sbjct 2976 AGATTGGCCTGAGTAAGAGACTAAGCTCAGAGCT-AA-A-G--AG-ATCTTGCAACACAT 3029
Query 3358 GTGCAACCGTGGCTCTAAAGTATCAAAA-AAGAGTTTCAAATTCACACCGATTGTTCCCA 3416
|||||| ||||||||||||||||| | ||| ||||| ||||| ||||||||||||
Sbjct 3030 GTGCAAGTGTGGCTCTAAAGTATCAGAGGAAG-GTTTCGGGTTCACGTCGATTGTTCCCA 3088
Query 3417 ACTCCTATCATTCACTCAATGCTTGCGGTTGCAACGGTCTGCGTTTGCGTCTGCGT-TTT 3475
||||| ||||||||||| |||||||||||||| || || || |||||||||||||| |||
Sbjct 3089 ACTCCGATCATTCACTCGATGCTTGCGGTTGCGACAGTATGTGTTTGCGTCTGCGTGTTT 3148
Query 3476 CATGCACGCTTTCCCAATCGTCAGACAAGGTTCTCACTTCAGTTGGGGAGGT-TTGGATT 3534
||||| ||||||||||| ||||||||||| ||||||||||||||||| ||| ||| |||
Sbjct 3149 -ATGCATGCTTTCCCAATGGTCAGACAAGGCTCTCACTTCAGTTGGGGTGGTCTTG-ATT 3206
Query 3535 ATGGCTCAATCTA 3547
|||||||||||||
Sbjct 3207 ATGGCTCAATCTA 3219
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 200166102570
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5