BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472374
Length=1922
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21380.1 | Symbols: | Target of Myb protein 1 | chr1:748563... 3046 0.0
AT1G76970.1 | Symbols: | Target of Myb protein 1 | chr1:289226... 780 0.0
> AT1G21380.1 | Symbols: | Target of Myb protein 1 | chr1:7485636-7488713
REVERSE LENGTH=1956
Length=1956
Score = 3046 bits (1649), Expect = 0.0
Identities = 1845/1936 (95%), Gaps = 27/1936 (1%)
Strand=Plus/Plus
Query 1 ACAAAGAAGTCGCAGTTGA-TTTATGGGCGGCTAAGGCTGATGATGACCTGACACAAAAC 59
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 30 ACAAAGAAGTCGCAGTTGATTTTATGGACGGCTAAGGCTGATGATGACCTGACACAAAAC 89
Query 60 TCCGATCGTGTTCGAATACAAGTTTAGATTTTTCTTACAACCCTTTTAATTATTTCAATA 119
||||||||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||
Sbjct 90 TCCGATCGTGTTCGATTACAAGTTTAGATTTTTCTGAGAACCCTTATAATTGTTTCAA-C 148
Query 120 TTCTCGATCTTGATACGCATAAATCTTAGCTTCGTC--T-ATCATCTGTTCTCAAGTTT- 175
|| | |||||| | |||||||||| || |||||||| | |||||||||||||||||||
Sbjct 149 TTTTGGATCTTCACACGCATAAATTTTCGCTTCGTCTTTCATCATCTGTTCTCAAGTTTA 208
Query 176 -AGTTTATACTTATAGGGAAA-TTGGAGCTTTAGGGTTTGATTGAAAAAGCGATCTTGCG 233
||| |||| | | ||||| ||||| ||||||| ||||||||||||||| ||||||||
Sbjct 209 GAGTCTATA-GT-CA-GGAAACTTGGAACTTTAGGATTTGATTGAAAAAGCAATCTTGCG 265
Query 234 ATGGCGAATAATGCGGCTGCTTGTGCTGAGAGGGCTACAAATGATATGCTGATTGGTCCA 293
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 266 ATGGCGAATAATGCGGCTGCTTGTGCTGAGAGGGCTACAAACGATATGCTGATCGGTCCA 325
Query 294 GATTGGGCTATCAACATTGAACTGTGTGACATTATCAACATGGAACCAAGTCAAGCAAAA 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 326 GATTGGGCTATCAACATTGAACTGTGTGACATTATCAACATGGAACCAAGTCAAGCAAAA 385
Query 354 GAAGCAGTGAAGGTGCTCAAGAAACGGTTAGGAAGTAAAAATTCTAAAGTCCAGATTCTT 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 GAAGCAGTGAAGGTGCTCAAGAAACGGTTAGGAAGTAAAAATTCTAAAGTCCAGATTCTT 445
Query 414 GCTCTTTATGCTTTGGAAACTCTGAGTAAGAATTGTGGCGAGAGTGTGTACCAGCTCATT 473
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 446 GCTCTTTATGCTTTGGAAACTTTGAGTAAGAATTGTGGCGAGAGTGTGTACCAGCTCATT 505
Query 474 GTTGACCGTGATATTTTACCTGATATGGTCAAAATAGTGAAGAAAAAGCCTGACCTGACT 533
|||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 506 GTTGACCGAGATATTTTACCTGATATGGTCAAAATAGTGAAGAAGAAGCCAGACCTGACT 565
Query 534 GTGAGGGAGAAGATACTTAGTTTATTAGATACATGGCAAGAAGCTTTTGGTGGAAGCGGC 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 566 GTGAGGGAGAAGATACTTAGTTTATTAGATACATGGCAAGAAGCTTTTGGTGGAAGCGGC 625
Query 594 GGAAGATTCCCTCAGTACTACAATGCTTATAATGAACTCAGGTCTGCTGGAATTGAATTC 653
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 626 GGAAGATTCCCTCAGTACTACAATGCCTATAATGAACTCAGGTCTGCTGGAATTGAATTC 685
Query 654 CCACCTCGAACCGAGAGCAGTGTACCGTTCTTTACTCCACCTCAGACTCAGCCTATTGTT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 686 CCACCTCGAACCGAGAGCAGTGTACCGTTCTTTACTCCACCTCAGACTCAGCCTATTGTT 745
Query 714 GCTCAGGCCGTTGCATCAGATGAAGATGCTGCTATTCAGGCCTCTTTGCAAAGTGATGAT 773
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 746 GCTCAGGCAACTGCATCAGATGAAGATGCTGCTATTCAGGCCTCTCTGCAAAGTGATGAT 805
Query 774 GCTTCTGCACTCAGCATGGAAGAGATTCAAAGCGCTCAGGGATCGGTTGATGTTTTGACA 833
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 806 GCTTCTGCACTCAGCATGGAAGAGATTCAAAGCGCTCAGGGATCAGTTGATGTTTTGACA 865
Query 834 GACATGCTTGGGGCTCTTGATCCAAGCCATCCAGAGGGTTTAAAGGAAGAACTTATAGTT 893
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 866 GACATGCTTGGGGCTCTTGATCCAAGTCATCCAGAGGGTTTGAAGGAAGAACTTATAGTT 925
Query 894 GACTTGGTCGAGCAATGTCGTACTTATCAAAGACGTGTAATGACT-TTGGTGAATACTAC 952
|||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct 926 GACTTGGTCGAGCAATGTCGTACTTATCAAAGACGTGTAATGGCTCTTG-TGAATACTAC 984
Query 953 TTCAGATGAGGAACTTATGTGTCAAGGGTTGGCACTGAATGACAATCTGCAGCGCGTTCT 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 TTCAGATGAGGAACTTATGTGTCAAGGGTTGGCACTGAATGACAATCTGCAGCGCGTTCT 1044
Query 1013 TCAGCACCATGATGATAAGGCAAAGGGAAACTCTGTTCCTGCAACAGCTCCCACTCCAAT 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 TCAGCACCATGATGATAAGGCAAAGGGAAACTCTGTTCCTGCAACAGCTCCCACTCCAAT 1104
Query 1073 ACCGCTTGTTAGCATCAATCatgatgatgatgatgatgagtcagatgatgatTTTTCT-C 1131
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
Sbjct 1105 ACCGCTTGTTAGCATCAATCATGATGACGATGATGATGAGTCAGATGATGATTTTT-TAC 1163
Query 1132 AGCTAGCTCATAGGTCGAAAAGAGAAAGTGCACGAGGGACTGGACAAGGGAATTTCAACC 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 AGCTAGCTCATAGGTCGAAAAGAGAAAGTGCACGAGGGACTGGACAAGGGAATTTCAACC 1223
Query 1192 CTATTCTTCCTCCTCCACCATCTACAATGAGGCCAGTACATGTTGATTCTGGTGCTATGG 1251
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1224 CTATTCTTCCTCCTCCACCATCTTCAATGAGGCCAGTACATGTTGATTCTGGTGCTATGG 1283
Query 1252 ACTTCCTCAGTGGTGATGTCTACAAACCTCAAGAAACCTTCAAGAGTGTAAAGCCTCCGA 1311
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1284 ACTTCCTCAGTGGTGATGTCTACAAACCTCAAGAAACCTTCGAGAATGTAAAGCCTCCGA 1343
Query 1312 GTACATCCCAATCATCAAACCATGACTATTCCGCTCCTATTTTCGATGAACCAGTTCCCC 1371
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1344 GTACATCCCAATCATCAAACCATGACTATTCTGCTCCTATTTTCGATGAACCAGTTCCTC 1403
Query 1372 AGAGCAAATCCCCTGAGCAAGCTTTATTCACCAAACCAGTTTATGACCAAACTGAACAAT 1431
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1404 AGAGCAAATCCCCTGAGCATGCTTTATTCACCAAACCAGTCTATGACCAAACTGAACAAT 1463
Query 1432 TGCCTCCTGCTCCATGGGATACTCAGGAACCCAGGAAGTATCCACCCTCAATGTCTGCTA 1491
||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 1464 TGCCTCCTGCTCCATGGGAGACTCAGGAGCCCCGGAAGTATCCACCCTCAATGTCTGCTA 1523
Query 1492 GAACCAACAAGAGACCAGAATACTTCCAGCATAGTGTTCCCCAACACTCAAGCAGTGGCT 1551
||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct 1524 GAACCAACAAGAGGCCAGAATACTTCCAGCATAATGTTCCACAACACTCAAGCAGTGCCT 1583
Query 1552 CTGAATCTTCATACGATGATCTTGTGGGACAATCTCGGAATCTCTCTCTGAATCCAACAG 1611
||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||
Sbjct 1584 CTGAATCTTCATACGATGATCTTTTGGGACAATCCCGGAATCTCTCTCTTAATCCAACAG 1643
Query 1612 CCTCTGCTGCTGCTGTCACACCACCAAAGAAAGATGATAAACCAGAGGATATCCTTTTCA 1671
||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1644 CCTCTGCTGCTCCTGTTACTCCACCAAAGAAAGATGATAAACCAGAGGATATCCTTTTTA 1703
Query 1672 AAGACCTGATGGAGTTTGCAAAAACCAGGACATCATCATCTTCTTCCTCCAAACCCAACA 1731
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1704 AAGACCTGATGGATTTTGCAAAAACCAGGACATCATCATCTTCTTCCTCCAAACCCAACA 1763
Query 1732 ACCAGAACAACAAACCGTTTTGAGACAGAGCTAGCAGTTGTTGCTTTAGTAA-CAACTAC 1790
| |||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||
Sbjct 1764 ATCAGAACAACAAACCGTTTTGAGACAGAGCTGGCAGTTGTTACTTCAGTAAACAACTAC 1823
Query 1791 TCTTT-ACTATTCttttttttttCTTCACTTGTGT--T-GTTTCCTTTGATTGAACATGG 1846
||||| ||||||||||||| |||| |||||||| | ||||||||||| |||||||||
Sbjct 1824 TCTTTTACTATTCTTTTTTCTTTC---ACTTGTGTACTTGTTTCCTTTGACTGAACATGG 1880
Query 1847 AtttttttATCAAATaaaaaaaaTAGTGAATATTTAGAGATCTGTTATTGGATAGAAATG 1906
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1881 ATTTTTTTACCAAATAAAAAAAATAGTGAATA----GAGATCTGTTATTGGATAGAAATG 1936
Query 1907 TCAAAATTTTATTTTA 1922
||||||||||||||||
Sbjct 1937 TCAAAATTTTATTTTA 1952
> AT1G76970.1 | Symbols: | Target of Myb protein 1 | chr1:28922666-28925404
REVERSE LENGTH=1761
Length=1761
Score = 780 bits (422), Expect = 0.0
Identities = 788/958 (82%), Gaps = 52/958 (5%)
Strand=Plus/Plus
Query 211 TTGATTGAAAAAGCGATCTTGCGATGGCGAATAATGCGGCTGCTTGTGCTGAGAGGGCTA 270
||||||| | ||| | | || |||||| ||| |||||||||| ||||| || |||||||
Sbjct 224 TTGATTG-ATAAGAGTTGTTAAGATGGCAAATGATGCGGCTGCATGTGCAGAAAGGGCTA 282
Query 271 CAAATGATATGCTGATTGGTCCAGATTGGGCTATCAACATTGAACTGTGTGA-CATTATC 329
|||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||
Sbjct 283 CAAATGATATGCTGATTGGTCCAGATTGGGCTATTAACATTGAATTGTGTGATC-TTATC 341
Query 330 AACATGGAACCAAGTCAAGCAAAAGAAGCAGTGAAGGTGCTCAAGAAACGGTTAGGAAGT 389
|||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 342 AACATGGATCCTAGTCAAGCAAAAGAAGCTGTGAAGGTGCTCAAGAAGCGGTTAGGAAGT 401
Query 390 AAAAATTCTAAAGTCCAGATTCTTGCTCTTTATGCTTTGGAAACTCTGAGTAAGAATTGT 449
||||| |||||||||||||||||||| |||||||| ||||||||| | ||||||||||||
Sbjct 402 AAAAACTCTAAAGTCCAGATTCTTGCACTTTATGCATTGGAAACTTTAAGTAAGAATTGT 461
Query 450 GGCGAGAGTGTGTACCAGCTCATTGTTGACCGTGATAT-TTTACCTGATATGGTCAAAAT 508
||||| | ||||||||||| || ||||||||| | | || | ||| |||||||||||
Sbjct 462 GGCGAAAACGTGTACCAGCTTATCATTGACCGTGGTCTATTGA-ATGACATGGTCAAAAT 520
Query 509 AGTGAAGAAAAAGCCTGACCTGACTGTGAGGGAGAAGATACTTAGTTTATTAGATACATG 568
||||||||||||||| || |||| ||||||||| |||||||| | ||| ||||| |||||
Sbjct 521 AGTGAAGAAAAAGCCGGAACTGAATGTGAGGGAAAAGATACTAACTTTGTTAGACACATG 580
Query 569 GCAAGAAGCTTTTGGTGGAAGCGGCGGAAGATTCCCTCAGTACTACAATGCTTATAATGA 628
||||||||| ||||||||| | || || ||| ||| || ||||||||||| ||||| ||
Sbjct 581 GCAAGAAGCCTTTGGTGGACGTGGAGGTCGATACCCACAATACTACAATGCCTATAACGA 640
Query 629 ACTCAGGTCTGCTGGAATTGAATTCCCACCTCGAACCGAGAGCAGTGTACCGTTCTTTAC 688
|||||||||||||||||||| || || |||||||| || |||||| || ||||||||||
Sbjct 641 TCTCAGGTCTGCTGGAATTGAGTTTCCGCCTCGAACGGAAAGCAGTCTATCGTTCTTTAC 700
Query 689 TCCACCTCAGACTCAGCCTATTGTTGCTCAGGCCGTTGCATCAGATGAAGATGCTGCTAT 748
|||| | | | ||| | |||| || |||||||||||||||||||
Sbjct 701 TCCA-C-C-G---CAG---A------CTCA-------GC--CAGATGAAGATGCTGCTAT 736
Query 749 TCAGGCCTCTTTGCAAAGTGATGATGCTTCT-GCACTCAGCATGGAAGAGATTCAAAGCG 807
|||||| || |||||| | |||||||||||| || |||||| ||||||||||||||||||
Sbjct 737 TCAGGCTTCGTTGCAAGGAGATGATGCTTCTAGC-CTCAGCCTGGAAGAGATTCAAAGCG 795
Query 808 CTCAGGGATCGGTTGATGTTTTGACAGACATGCTTGGGGCTCTTGATCCAAGCCATCCAG 867
|| ||||||| ||||||||||||| ||||||||||| || | |||||| | |||| |
Sbjct 796 CTGAGGGATCAGTTGATGTTTTGATGGACATGCTTGGAGCACATGATCCCGGGAATCCCG 855
Query 868 AGGGTTTAAAGGAAGAACTTATAGTTGACTTGGTCGAGCAATGTCGTACTTATCAAAGAC 927
|| ||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||
Sbjct 856 AGAGTTTAAAAGAAGAAGTTATAGTAGACTTGGTTGAGCAATGTCGTACTTATCAAAGAC 915
Query 928 GTGTAATGACT-TTGGTGAATACTACTTCAGATGAGGAACTTATGTGTCAAGGG-TTGGC 985
||||||||||| ||| |||| ||||| |||||||||||||| ||||||| ||| |||||
Sbjct 916 GTGTAATGACTCTTG-TGAACACTACAACAGATGAGGAACTTCTGTGTCA-GGGATTGGC 973
Query 986 ACTGAATGACAATCTGCAGCGCGTTCTTCAGCACCATGATGATAAGGCAAAGGGAAACTC 1045
| | || || ||| |||||| |||||||||| || ||||||| ||||| | |||
Sbjct 974 ATTAAACGATAATTTGCAGCATGTTCTTCAGCGTCACGATGATATCGCAAATGTCGGCTC 1033
Query 1046 TGTTCCTGCAAC---A-G-----CT----C-CCAC-TCCAATACCGCTTGTT-AGCATCA 1089
||||||| ||| | | || | || | |||| | | | ||||| | |||||
Sbjct 1034 TGTTCCTTCAAATGGAAGGAATACTAGAGCTCCTCCTCCAGTTCAGATTGTTGA-CATCA 1092
Query 1090 ATCatgatgatgatgatgatgagtcagatgatgatTTTTCTCAGCTAGCTCATAGGTC 1147
||||||||||||| ||||| || ||||||||||| ||| ||| ||| ||||| |||||
Sbjct 1093 ATCATGATGATGAAGATGACGAATCAGATGATGAGTTTGCTCGGCTTGCTCACAGGTC 1150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95180233320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5