BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472387 Length=1090 Score E Sequences producing significant alignments: (Bits) Value AT1G21510.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1419 0.0 > AT1G21510.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; Has 380 Blast hits to 286 proteins in 63 species: Archae - 0; Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13; Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink). | chr1:7531312-7532629 REVERSE LENGTH=1318 Length=1318 Score = 1419 bits (768), Expect = 0.0 Identities = 1006/1115 (90%), Gaps = 40/1115 (4%) Strand=Plus/Plus Query 1 ACACATTATATACAATAAGCATCTCCATTTCCTGTT-TAAACCAATCCCTTTTAATA-TT 58 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || Sbjct 14 ACACATTATATACAATAAGCATCTCCATTTCCTGTTGT-AACCAATCCCTTTTAATAGTT 72 Query 59 ACTTTCTCTCCTAAAGATTTTTC---------a---aaa--aaa----aGGAATGGGTTG 100 |||||||||| || ||||||||| | ||| ||| |||||||||||| Sbjct 73 ACTTTCTCTCGTACAGATTTTTCGAAAAAAGTATTGAAATCAAACTCTAGGAATGGGTTG 132 Query 101 TTGTATCAGCAAATGCTCTCCAAAGACGAAAGATTTCAAAGAAGCAGAAGAATCTCATGA 160 ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct 133 TTGTATCAGCAAATGCTCTCCAAAGTCGAAAGATTTCAAAGAAGCAGAAGAACCTCACGA 192 Query 161 GAAGTACTGTTATGTTCCAGAGAAGCTGTTCATGTCGCGTTGTCCAAGTCGTGTTTCTCC 220 ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 193 GAAGTACTGTTCTGTTCCAGAGAAGATGTTCATGTCTCGTTGTCCAAGTCGTGTTTCTCC 252 Query 221 ACTTAATCTTCCGGAGAAGAACCGGTTTAATCCTATCCCTGTCCCGGATAAGTTTATAC- 279 |||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| | Sbjct 253 ACTTAATCTTCCGGAGAAAAACCGGTTTCATCCTATCCCTGTCCCGAATAAGTTTAT-CA 311 Query 280 ATATCCCGGATAAACTCCTTCCTCTTTCTCCTCCTGTAAAGTTGGCATCTTTCTCTCCAA 339 ||||||||| |||| | | |||| || ||||||| |||||||||||||||||||||| Sbjct 312 ATATCCCGGGTAAAGTAATCCCTCCCCCTTCTCCTGTGAAGTTGGCATCTTTCTCTCCAA 371 Query 340 TCCAACCTTCAACCACAAGCAACTCTACTCTCAGCTCATCAAGCTCCTCACTTTCGACAG 399 |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | Sbjct 372 TCCAACCTTCAACCACAAGCAACTCTTCTCTCAGCTCATCAAACTCGTCACTTTCGACCG 431 Query 400 CTTCTTCAGTCTCGGTTTCGAAGGAGAGATCTTTCTCCAATGATTTCTTGCGTGCTTGTT 459 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 CCTCTTCAGTTTCGGTTTCGAAGGAGAGATCTTTCTCCAATGATTTCTTGCGTGCTTGTT 491 Query 460 ACCAAGAGAATTCTCATGTTGCTCGAATTCA-TTCTTTACGAGAAGCTTCTCTATCAATG 518 ||||||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| Sbjct 492 ACCAAGAGAATTCACATGTTGCTCGAAT-CAATTCCTTACGAGAAGCTTCTCTATCTATG 550 Query 519 AAAACCACAAAACCGGGATATCCTAGCCGGTTCGATTCTCCGGTTTTACCATA-CCGGTA 577 ||||||||||||||| |||||||||||||||| |||||||||||| ||||| | |||| | Sbjct 551 AAAACCACAAAACCGAGATATCCTAGCCGGTTTGATTCTCCGGTTATACCA-AGCCGGAA 609 Query 578 TTCAACAACACCAAACAGAGCAAATGAAGATCCGAAAAGAGGACCAAATTGTTCTAAGAG 637 ||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| Sbjct 610 TTCAACAACACCAAACAGAGCAAATGAAGATTCTAAAAGAGGATCAAATTGTTCTAAGAG 669 Query 638 AACTCGAGAGCCATCACCAAACCATCGTGCATTGACACGACAAAAGAGTTTTCGTCAAGA 697 ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct 670 AACTCGAGAGCTATCACCAAACCATCGTTCATTGACACGACAAAAGAGCTTTCGTCAAGA 729 Query 698 TCAAGAAAGAGTTATTATGTCCTCTTCATCAAATTCTTTAACCAAGGGAAAGTACTTCAA 757 ||||||||||||| |||| || ||||||||||| || |||||||||||||||||||| || Sbjct 730 TCAAGAAAGAGTTGTTATCTCTTCTTCATCAAACTCCTTAACCAAGGGAAAGTACTTGAA 789 Query 758 ATCGCCATCTCCAAGCAGGAGATATGAGGGAAATTTCTTGAAATCTCCATCTCCAAGCAG 817 ||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| | Sbjct 790 ATCTCCATCTCCAAGCAGAAGATATGAGGGAAATTTCTTGAAATCACCATCTCCAAGCCG 849 Query 818 GAGATTTGGTAT-GACGGCGACT-GATTTGACGGTAAAATCAGTCTCTTCTTGTGTAAGG 875 |||||||||| | | || || || | ||||||||| | ||| | ||||||||||| Sbjct 850 GAGATTTGGTGTAGCCG-CGGCTAG-TTTGACGGT-----C--TCT-T-CTTGTGTAAGG 898 Query 876 AAAGATAGTTTAGATCTGTCTGGTCGCAAGACTTGTCAGAAGAGCAACAGATCAGAGCCT 935 ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct 899 AAAGATAGTTTAGATCTGTCTGGTCGCAAGATTTGTCATATGAGCAACAGATCAGAGCCT 958 Query 936 CGGATTCATCGCATAAGTTCTAAGATCGACGAAAAAATTATCAGAGAAGTAATCACAAAC 995 || || |||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 959 CGAATACATCGCATAAGTTCTAAGATCGACCAAACAATTATCAGAGAAGTAATCACAAAA 1018 Query 996 CATAAGGAACCAGTGGTTCCAATATTCGAAGAAGTCGGCAATCCTCTGATTGATTTGGAT 1055 ||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| Sbjct 1019 GATAGGGAACCAGTGGTTCCAATATTTGAAGAAGTTGGCAATCCTTTGATTGATTTGGAT 1078 Query 1056 TGCTTTATCTTTCTTTAAGGAGAAGCTTTTAATTT 1090 |||||||||||||||||||||||| | ||| |||| Sbjct 1079 TGCTTTATCTTTCTTTAAGGAGAAACATTTGATTT 1113 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53413379880 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5