BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472398
Length=2530
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21610.3 | Symbols: | wound-responsive family protein | chr... 2494 0.0
AT1G77310.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 963 0.0
> AT1G21610.3 | Symbols: | wound-responsive family protein | chr1:7573944-7578956
FORWARD LENGTH=2531
Length=2531
Score = 2494 bits (1350), Expect = 0.0
Identities = 1608/1725 (93%), Gaps = 47/1725 (3%)
Strand=Plus/Plus
Query 846 GGAAAACACAGGAGTCACCTTTGCCTTTTGGAGCGCAAGCTGCGAATACTTCAGTATCTC 905
||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||
Sbjct 810 GGAAAACACAGGAGTCACCTTTGCCTTCTGGAGCGCAAGATGCAAATACTTCAGTACCTC 869
Query 906 TGGATGATGTGAAGCATTCTGATAGAGCAAATCATCAGTCTAAGAATGATACAAGTCACA 965
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 870 TGGATGATGTGAAGCATTCTGATAGAGCAAATCATCAGTCTAGGAATGATACAAGTCACA 929
Query 966 AGTCAAGGGAAACTGGATCCTCTAGTGCCCTTCATCCGAAATACAGCAACAAAAGCTTAC 1025
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 930 AGTCAAGGGAAACTGGATCCTCTAGTGCCCTTCATCAGAAATACAGCAACAAAAGCTTAC 989
Query 1026 ATCAACAATCTAAGTCCCTGCCAGGAAAATCTCCCACCAATGTTTTTGCAGAGGCAACAG 1085
| |||||||||| |||||||| ||||||||||||| ||||||| |||||||||| |||||
Sbjct 990 ACCAACAATCTACGTCCCTGCTAGGAAAATCTCCCCCCAATGTCTTTGCAGAGGTAACAG 1049
Query 1086 TAGTCCTTCAGAAAGAAAACAATGGTATGCATCAGCTGGCAAATGCAACGGGAAGCAGAC 1145
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1050 TAGTCCGTCAGAAAGAAAACAATGGTATGCATCAGCTGGCAAATGTAACGGGAAGCAGAC 1109
Query 1146 AATCTAGTCAAGCGTCTAAAAAAGATGGTTCTAATGTGAAGTCTAAAACCTCGATCCTTG 1205
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1110 AATCTAGTCAAGCGTCTAAAAAAGATGGTTCTAATGTGAAGTCTAAAACCTCAATCCTCG 1169
Query 1206 AGAAAGCCATAAGGGAATTGGAGAAGGTGGTTGCGGAATCAAGGCCTCCTGCTATCACTG 1265
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1170 AGAAAGCCATAAGGGAACTGGAGAAGGTGGTTGTGGAATCAAGGCCTCCTGCTATCACTG 1229
Query 1266 AAAATCAAGAAGCTGATACCTCATCCCAGGCAGTGAAGAGGAGATTGCCCAGGGATGTTA 1325
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1230 AAAATCAAGAAGCTGATACCTCATCCCAGGCAGTGAAGAGAAGATTGCCCAGGGATGTTA 1289
Query 1326 AATTGAAACTTGCTAAAGTTGCTAGGATTGCGCAGGCAAGCCAGGGAAAACATTCAACAG 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 AATTGAAACTTGCTAAAGTTGCTAGGATTGCGCAGGCAAGCCAGGGAAAACATTCAACAG 1349
Query 1386 AGTTAATCAACCGTCTTATGAGCATTGTTGGTCACCTAATCCAGCTTAGATCACTTAAGA 1445
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1350 AGTTAATCAACCGTCTTATGAGCATTGTTGGTCACCTAATCCAGCTTAGGTCTCTTAAGA 1409
Query 1446 GGAACTTGAAAATCATGATGGATATGGGAGATTCTGCAACCCGAGAAAAGGATACTAGGT 1505
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1410 GGAACTTGAAAATCATGATTGATATGGGAGATTCTGCAACCCGAGAAAAGGATACTAGGT 1469
Query 1506 TCCAGCAAATCAACAATGAAGTTCTTGATATGATAAAAGCGAAAGTTTCTTTGATGGAAT 1565
|| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1470 TCAAGCAAATCAACAATGAAGTTCTTGATATGATAAAGGCCAAAGTTTCTTTGATGGAAT 1529
Query 1566 CACAGGCAATCAAACCAGAAGGTGGAACATCAGACGATTTTCAGGACTCAGTAGAAAAGC 1625
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1530 CACAGGCAATCAAACCAGAAGGTGCAACATCAGACGATTTTCAGGACTCAGTAGAAAAGC 1589
Query 1626 CATCTTTGAAGAAGTTTGTCATGGATGCAGCATTGGAGGATAAATTGTGTGATCTATATG 1685
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1590 CATCTTTGAAGAAGTTTGTCATGGATGCGGCATTGGAGGATAAATTGTGTGACCTATATG 1649
Query 1686 ACATCTTTATTGATGGATTGGATGATGAAGATCAAGGTCCACAAA-AAAGAAAGCTATAT 1744
|||| ||||| || ||||||||||| | |||||||||||||||| ||| ||||||||||
Sbjct 1650 ACATATTTATCGACGGATTGGATGA--A-GATCAAGGTCCACAAACAAA-AAAGCTATAT 1705
Query 1745 GTCAATCTGGCTGAACTCTGGCCAAATAGATTGATGGATAATCATGGGATCAAACGTGCG 1804
|||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 1706 GTCAATTTGGCTGAACTCTGGCCAAATAGATTGATGGATTATCGTGGGATCAAACATGCA 1765
Query 1805 ATTTGCCGGGCAAAGGAGAGACGAAAAGCATTGTATGGAAACCTTGCGAAAGAGATGG-A 1863
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1766 ATTTTCCGGGCAAAGGAGAGACGAAAAGCATTGTATGGAAACCTTGCGAAAGAGATGGTA 1825
Query 1864 --TC-------G-T-A-G--GA--A-G---CAGTTGGTACCAAGAATAGACTGGGCTGCT 1903
|| | | | | || | | |||||||||||||||| |||||| |||||
Sbjct 1826 GATCAAACAAAGATGAAGAAGAGTATGAAGCAGTTGGTACCAAGAACAGACTGTACTGCT 1885
Query 1904 CAGCCCAACACCGAATTAGTGGTTCAGAGACAACACAGTGGAGAGAAGAAAAT-GATTGT 1962
||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct 1886 CAGCCCAACACCGAATTAGTGGTTCAGAGACAACACAGTGGGGAAAA-AAAATTGATTGT 1944
Query 1963 TGATCCAAATGCAACCAGCACTTCCGTGGTCACCAGTCAAACTATGGTTGACAGATCAAA 2022
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1945 TGATCCAAATGCAACCAGCACTTCCGTGGTCACTAGTCAAACTATGGTTGACAGATCAAA 2004
Query 2023 TCAGCAGCA---TGAGAAGCTAAAGGGAAGCTCAAGCTCTTGCAAACCTATAGAGGAAAC 2079
||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct 2005 TCAGCAGCAGCCTGAGAAGCTAAAGGGAATCTCAAGCTCTTGCAATCCTACAGAGGAAAC 2064
Query 2080 AAGAGTGGTCAAGAGAAAGA-CAGAGGCCGTAATGGCAGAGAAACAAGTTGTTCTTGCCC 2138
|||||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||
Sbjct 2065 AAGAGTGGTCAAGAGAAAGAAC-GAGGCTGTAATGGCTGAGAAACAAGTCGTTCTTGCCC 2123
Query 2139 TGAAGAAGCCCGAACATCCACAGACACGTGTTATCCCAGCTCCTCAGAATCTGAACATCC 2198
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2124 TGAAGAAGCCCGAACATCCACAGACACGTGTAATCCCAGCTCCTCAGAATCTGAACATCC 2183
Query 2199 CACAAACAACTCCGGACCTGAACTTGCCAAGTTGACATCACGATTGAC---GGAGCTCTT 2255
||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2184 CACGAACAACCCCGGACCTGAACTTGCCAAGTTGACATCACGATTGACAAAGGAGCTCTT 2243
Query 2256 AGAAACGCCGAAGACTATAACCTCCGGCCTCTTCCTTGC----ATTTTCAGGTGGCACGG 2311
|||||||||| |||| |||||||| |||||||||||| | ||||| |||||||||||
Sbjct 2244 AGAAACGCCGGAGACAATAACCTCTGGCCTCTTCCTTCCTTGTATTTTGAGGTGGCACGG 2303
Query 2312 CATTAGTCCTGGTGATGCGGATGCTTGGTTTTA--AGCTACGAAGCATGGTTTATAAAGT 2369
|||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct 2304 CATTAGTCCTGGCGATGCCGATGCTTGGTTTTTTTAGCTACAAAGCATGGTTTATAAAGT 2363
Query 2370 TGTCTGTATTCTAGTTTTTGCTCCTATTAAGTTAGTTACTCTATTTACGTGTCCTTTTT- 2428
||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 2364 TGTCTGTATTCCAGTTTG-GCTCTTATTAAGTTAGTTACTCTATTTACGTGTCCTTTTTC 2422
Query 2429 AAG--TCTAATGTGTAAAGTTATGATTTTACTAGCAACTCTTTACTTTTGAGTaaaaaaa 2486
|| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2423 AAAACTCTAATGTATAAAGTTATGATTTTACGGGCAACTCTTTACTTTTGAGTAAAAAAA 2482
Query 2487 -CAGAGCAGCTTTTAGTACTGAATTTTGGGTAACATAGTTGAAAA 2530
|||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 2483 ACAGAGCAGGTTTTAGTACTGAATTTTGGGTAACGTAGTTGAAAA 2527
Score = 1182 bits (640), Expect = 0.0
Identities = 758/813 (93%), Gaps = 16/813 (2%)
Strand=Plus/Plus
Query 18 TTTTGGTATCCCGCGCAACTTTCTTCTTCTCTCAGTTTCAG--TCTCT-C-TCTATTCAT 73
|||||||||||||||||||||| ||| | |||||||||||| ||||| | || ||||||
Sbjct 1 TTTTGGTATCCCGCGCAACTTT-TTC-T-TCTCAGTTTCAGTTTCTCTACATCGATTCAT 57
Query 74 CGATTCCACTCTCTTGATTGGTGTTGAGATCGAGT-CGTCTCGAACCCAGGGGTCAGTAC 132
|||||||||||||||||||| |||| ||||| | | |||||||||||||||||| ||||
Sbjct 58 CGATTCCACTCTCTTGATTGCTGTTTAGATC-AATCCGTCTCGAACCCAGGGGTTAGTAT 116
Query 133 ATAGTGGATC--ACTGA----A-CCGACCCGACCCGAATTATTAATGTCGGAAGTGAAGG 185
|||||||||| ||||| | |||||||||||||||||||||||||||||||| || |
Sbjct 117 ATAGTGGATCAAACTGATCCGACCCGACCCGACCCGAATTATTAATGTCGGAAGTTAATG 176
Query 186 AGATAAGTGGGGGTTCTATTGGTGGCGAATCGTTGGGAGCATCGCCGAAGGTTTTGACGG 245
|||| ||||| ||||||||||| ||||||| |||| |||| |||||||||||||| ||||
Sbjct 177 AGATGAGTGGTGGTTCTATTGGCGGCGAATTGTTGAGAGCGTCGCCGAAGGTTTTAACGG 236
Query 246 CCGGTGATCGGAAATTACTCAAGGTGGAGCTTCGACCTGGGGATACGACTTATGTTTCGT 305
|||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct 237 CCGGTGATCGGAAATTACTCAAGGTGGAGCTTCGGCCAGGGGATACGACGTATGTTTCGT 296
Query 306 GGAAGAAGCTTATGAGGGATGTTAGTAAGGTCAATGGTTCATCGGCTTCGGTTCCCGATC 365
||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |
Sbjct 297 GGAAGAAGCTTATGAGGGATGCTGGTAAGGTCAATGGTTTATCGGCTTCGGTTCCCGACC 356
Query 366 CGCCTCCTAATGCTAACCCTAACCTCGAGTCTCGAATTGCACCGGGGCATCCAGCAGAGA 425
||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct 357 CGCCTCCTAATGCTAACCCTAACCTTGAGTTTCGAATTGCACCGGGGCATCCAGTAGAGA 416
Query 426 TTGAAACGAATGAACAACCTCATTCTAACCATTTCAACGCTGTTATTGAGAAGATAGAGA 485
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 417 TTGAAACGAATGAACAACCTCATTCTAACCGTTTCAACGCTGTTATTGAGAAGATAGAGA 476
Query 486 GGCTCTATAAGGGAAACGATAGCAGTGATGGGGAAGAGTTAGACGGTGCTCCTGATGATG 545
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GGCTCTATAAGGGGAACGATAGCAGTGATGGGGAAGAGTTAGACGGTGCTCCTGATGATG 536
Query 546 ATGAGTATGACACTGAAGATTCATTTATTGATGATGCTGAACTGGATGAGTATTTTGAAG 605
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 537 ATGAGTATGACACTGAAGATTCATTTATAGATGATGCTGAACTGGATGAGTATTTCGAAG 596
Query 606 TTGATAATTCAACAGTTAAACATGATGGATTTTATGTATATAGAGGCAAACTGGAGCGGA 665
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 597 TTGATAATTCAACAGTTAAACATGATGGATTTTATGTAAATAGAGGCAAGTTGGAGCGGA 656
Query 666 TGGAACCTTCAACAACATCTGACCAGCAACCCAAAAAACGGCGACGAAAAGATTCAACAA 725
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 657 TGGAACCTTCAACAACATCTAACCAGCAACCCAAAAAACGGCGACGAAAAGATTCAGCAA 716
Query 726 AACCATGTGGTGATGCAGTTGACGTATCCGATAAACACACCAAGTTGTCTATAACAGCTA 785
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 AACCCTGTCGTGATGCAGTTGACGTATCCGATAAACACACCAAGTTGTCTATAACAGCTA 776
Query 786 GGCGAAAGGATCAATCAACTGCTTCTGGGTCCT 818
|| ||||||||||||||||||| |||||||||
Sbjct 777 GGAAAAAGGATCAATCAACTGCTCCTGGGTCCT 809
> AT1G77310.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: wound-responsive family protein (TAIR:AT1G21610.1);
Has 493 Blast hits to 482 proteins in 163 species: Archae -
0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65;
Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). | chr1:29051505-29056339
FORWARD LENGTH=2480
Length=2480
Score = 963 bits (521), Expect = 0.0
Identities = 1314/1684 (78%), Gaps = 105/1684 (6%)
Strand=Plus/Plus
Query 239 TTGACGGCCGGTGATCGGAAATTACTCAAGGTGGAGCTTCGAC-CTGGGGATACGACTTA 297
||||| |||||||||||||||||||| || || || | || | | ||| || ||
Sbjct 242 TTGACCGCCGGTGATCGGAAATTACTTAAAGTTGAAC-TCCTCAAAGAGGAGACCAC-GC 299
Query 298 T-GTTTCGTGGAAGAAGCTTAT-GAGGGATGTTAGTAAGGTCAA---TGG-TTCATCGGC 351
| || ||||||||||||||||| || || | ||| || | || || || || |
Sbjct 300 TCGTATCGTGGAAGAAGCTTATGGA-TGAGGCTAGCAAAGAAAACGGCGGCTTGTTC-GT 357
Query 352 TTCGGTTCCCGATCCGCCTCCTAATGCTAACCCTAACCTCGAGTCTCGAATTGCACC-GG 410
||||| |||||| | || || |||||| |||||||||||||||| ||| ||||||| ||
Sbjct 358 TTCGGCTCCCGAACGGCTTCTTAATGCCAACCCTAACCTCGAGTTTCGCCTTGCACCGGG 417
Query 411 GGCATCCAGCAGAGATTGAAACGAATGAA-CAACCTCATTCTAACCAT-TTCAACGCTGT 468
|||| | | |||||| ||||| | |||| ||||||||| |||| | | || ||| ||||
Sbjct 418 GGCA-CAAACAGAGAATGAAATG-GTGAATCAACCTCATCCTAATCGTCTT-AACTCTGT 474
Query 469 TATTGAGAAGATAGAGAGGCTCTATAAGGG-AAACGATAGCAGTGATGGGGAAGAGTTAG 527
||| | ||||| ||||| || |||| ||| ||| || | |||||||||||||||||||
Sbjct 475 TATAGCCAAGATTGAGAGACTTTATATGGGTAAA-GACGGTAGTGATGGGGAAGAGTTAG 533
Query 528 ACGGTGCTCCTGATGATGATGAGTATGACACTGAAGATTCATTTATTGATGATGCTGAAC 587
||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 534 ACGGTGCTCCTGACGATGATGACTATGACACTGAAGATTCATTTATCGATGATGCTGAAT 593
Query 588 TGGATGAGTATTTTGAAGTTGATAATTCAACAGTTAAACATGATGGATTTTATGT-ATAT 646
|||||||||||||||||||||||||||| || |||||||||||||||||| ||| | ||
Sbjct 594 TGGATGAGTATTTTGAAGTTGATAATTCGCCAATTAAACATGATGGATTTTTTGTCA-AT 652
Query 647 AGAGGCAAA-CTGGAGCGGATGGAACCTTCAACAACATCTG-ACCAGCA--ACCCAAA-A 701
||||| ||| | || || || ||||||||| | ||||| | ||||||| | ||||| |
Sbjct 653 AGAGG-AAAGTTAGAACGAATTGAACCTTCAGCTACATC-GAACCAGCAGCAACCAAAGA 710
Query 702 AACGGCGACGAAAAGATTCAACAAAACCATGTGGTGATGCAGTTGACGTATCCGATAAAC 761
|| ||||| | || || ||| ||||||| ||||| |||| ||||| |||||| | |||
Sbjct 711 AAAGGCGAAGGAAGGAGTCAGCAAAACCTTGTGGCGATGTTGTTGATGTATCC-AGAAA- 768
Query 762 AC-A-CCAAGTTGTCTATA-ACAGCTAGGCGAAAGGATCAATCAACTGCTTCTGGGTCCT 818
|| | ||||| || ||| | || ||| || ||||||||||||| || || ||||| |||
Sbjct 769 ACGAGCCAAGATGGCTA-AGACGGCTGGGGGAAAGGATCAATCTGCTTCTCCTGGGCCCT 827
Query 819 CTTTGAAGAGAAAGTAT--AATG-TCGCAAGGAAAACACAGGAGTCACCTTTGCCTTTTG 875
||| ||||| ||| | | |||| | ||| || || || || ||| || ||||
Sbjct 828 CTTCGAAGA-AAA-TTTCCAATGAT-TCAAAGACGGTGCAAGATTC-GTTTTCCCCTTTG 883
Query 876 -GAGCGCAAGCT-GCGAAT-ACTTCAGTA-TCTCTGGATGATGTGAAGCATTCTGATAGA 931
||||||| | || ||| | ||| || | | |||| ||||||||||| |||||| |
Sbjct 884 AAAGCGCAAAATGGC-AATGA-TTCCTTAGT-TTTGGAAAATGTGAAGCATACTGATAAA 940
Query 932 GCAAATCATCAGTCTAA-GAATGATACAAGTCAC-AAGTCAAGGGAAACTGGATCCTCTA 989
|| ||||| ||| | || ||||| || |||| | ||||||| || | ||||||| |||
Sbjct 941 GCGAATCACCAG-CCAATGAATGCCACGAGTC-CGAAGTCAAAGGCAGCTGGATCTTCTG 998
Query 990 GTGCCCTTCATCCGAAATACAGCAACAAAAGCT-TACATCAACAATCTAAGT-CCCTGCC 1047
| ||||||||||||| | ||||| |||||| | | ||| |||||||||| | |||| ||
Sbjct 999 GCCCCCTTCATCCGAAGTGCAGCAGCAAAAG-TGTTCATGAACAATCTAATTCCCCT-CC 1056
Query 1048 AGGAAAATCTCCCACC-AATGTTTTTGCAGAGGCAACAGTAGTCCTTCAGAAAGAAAACA 1106
|||||||||| | || ||||||| ||| | || ||||||| | |||| ||| ||||
Sbjct 1057 AGGAAAATCT-CGGCCAAATGTTTCGGCAAAATCAGCAGTAGTTCGTCAGCAAGTTAACA 1115
Query 1107 ATGGTATGCATCAGCTGGCA-AATGCAACGGGAAGC-AGACAATCTAGTCAAGCGTCT-A 1163
|||| |||| | | |||| | | |||||||| |||| | || ||||| |||| ||| |
Sbjct 1116 ATGGCATGCCTGACCTGG-ACATTGCAACGGAAAGCAAAAC-ATCTATTCAAATATCTAA 1173
Query 1164 AAAAAGATGGTTCTAATGTG-AAGTCTAAA-ACCTCGATC-CTTGAGAAAGCCATAAGGG 1220
|||||| ||||| |||| | | ||||| | ||||| | |||||||||||||| | ||
Sbjct 1174 AAAAAG-CGGTTCAAATG-GCCGGCCTAAATA-CTCGA-CACTTGAGAAAGCCATCA-GG 1228
Query 1221 AA-TTGGAGAAGGTGGTTGCGGAATCAAGGCCTCCTGCTATCACTGAAAATCAAGAAGCT 1279
|| ||||||||| |||| || |||||||||||||||||| |||||| |||||||| ||
Sbjct 1229 AATTTGGAGAAGTTGGTCGCTGAATCAAGGCCTCCTGCTGCCACTGAGAATCAAGATGCC 1288
Query 1280 GATACCTCATCCCAGGCAGTGAAGAGGAGATTGCCCAGG-GATGTTAAATTGAAACTTGC 1338
|||| ||| ||||| |||||||||||| ||||| ||||| ||||| |||||| | |||||
Sbjct 1289 GATATCTCTTCCCAAGCAGTGAAGAGGGGATTG-CCAGGAGATGTAAAATTGCATCTTGC 1347
Query 1339 TAAAGTTGCTAGGATTGCGCAGGCAAGCC-AGG-GAAAACATTCAACAGAGTTAATCAAC 1396
|||||||||||| || ||| | || |||| ||| | ||| | ||| ||||||||||||
Sbjct 1348 TAAAGTTGCTAGAATCGCGTATGCGAGCCAAGGTG-AAATA-TCAGGAGAGTTAATCAAT 1405
Query 1397 CGTCTTATGAGCATTGTTGGTCACCTAATCCAGCTTAGATCACTTAAGAGGAACTTGAAA 1456
||||| ||| ||||||| ||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct 1406 CGTCTCATGGGCATTGTCGGTCATCTAATACAGATTAGATCACTTAAGAGGAACTTGAAA 1465
Query 1457 ATCATGATGGATATGGGAGATTC--TGCAACCCGAGAAAAGGATACTAGGTTCCAGCAAA 1514
|||||||| ||| | | | || ||||| |||||||| |||||||| || |||| |
Sbjct 1466 ATCATGATTGAT-TCG-ATCGTCACTGCAAATCGAGAAAAAGATACTAGATTTCAGCGGA 1523
Query 1515 TCAACAATGAAGTT-CTTGATATGATAAAAGCGA-AAGTTTCT-TTGATGGAATCACAGG 1571
|||| | |||| | || || ||| ||||| | | ||||| | ||| ||||||| ||||
Sbjct 1524 TCAAGAGTGAAATAACT-GAGATGTTAAAAAC-ACAAGTTCCACTTG-TGGAATCCCAGG 1580
Query 1572 CAATCAAACCA-GAAGGTGGAACATCAGACGATTTTCAGGAC-TCAG-TA----GAAAAG 1624
|| |||| || |||| |||||||||||||||||||||||| | | | | ||||
Sbjct 1581 AAA-CAAATCAAGAAGCTGGAACATCAGACGATTTTCAGGATGTTGGATCTCTTGGAAAG 1639
Query 1625 CCATCTTTGAAGAAGTTTGTCATGGATGCAGCATTGGAGGATAAATTGTGTGATCTATAT 1684
|| || ||||||||||||||||||||| || ||||||| ||||||||||||||||||
Sbjct 1640 TCACCTGTGAAGAAGTTTGTCATGGATGTGGCGCTGGAGGAAAAATTGTGTGATCTATAT 1699
Query 1685 GACATCTTTATTGATGGATTGGATGATGAAGAT-CAAGGTCCACAAAAAAGAAAGCTATA 1743
||| | ||| |||| ||| ||||||| | || || ||| |||||| |||||||| ||
Sbjct 1700 GACGTGTTTGTTGAGGGAATGGATGA--AC-ATTCA-GGTTCACAAATCAGAAAGCTTTA 1755
Query 1744 TGTCA-ATCTGGCTGAACTCTGGCCAAATAGATT-GATGGATAATCATGGGATCAAACGT 1801
| ||| |||| ||| |||| ||||| ||||| || | || | ||||||| ||||| |||
Sbjct 1756 T-TCAGATCTAGCTCAACTGTGGCCCAATAGTTTAGTTG-ACAATCATGAGATCAGGCGT 1813
Query 1802 GCGATTTGCCGGGCAAAGGAGAGACGAAAAGCATTGTATGGAAACCTTGCGAAAGAGATG 1861
|| |||||||||| |||||| || || | ||||||| | |||||| ||| ||| ||||||
Sbjct 1814 GCCATTTGCCGGGAAAAGGAAAGGCGGAGAGCATTGGAAGGAAACATTGGGAAGGAGATG 1873
Query 1862 GATC 1865
||||
Sbjct 1874 GATC 1877
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125567858329
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5