BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472400
Length=4316
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21630.2 | Symbols: | Calcium-binding EF hand family protei... 3326 0.0
> AT1G21630.2 | Symbols: | Calcium-binding EF hand family protein
| chr1:7581084-7588064 FORWARD LENGTH=4385
Length=4385
Score = 3326 bits (1801), Expect = 0.0
Identities = 2031/2141 (95%), Gaps = 19/2141 (1%)
Strand=Plus/Plus
Query 1 AGCTGTACCGGTTTCAATCTCAAATCCCGGGAAATTGAAATTTGTTTCTCTGTCGGAGAA 60
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 69 AGCTGTACCGGTTTCAATCTCAAATCCTGGG-AATTGAAATTTGTTTCTCTGTCGGAGAA 127
Query 61 TCATCATCGACTTCTCTGCTACTTCTTCTCTCCGCGCTCT-CTTCGTCGTCGTCGATCCT 119
||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||
Sbjct 128 TCATCATCGACTTCTCTGCTA---CTTCTCTCCGCGCTCTCCTTCGTCGTCGTCGAT-CT 183
Query 120 CTTCACCTTTGCCGATCTCATTTCCAATCCTGAAAAAATCGATGTGGTACTGATCTACGA 179
||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 184 CTTCAGCTTCACCGATCTCATTTCCAATCCTG-AAAAATCGATGTGGTACTGATCTACGA 242
Query 180 TTGTGCTCCGTTGGTAGCCTTATGAATTAGGGTTTTTCTTACGCATCATT-GTATGCGTT 238
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct 243 TTGTGCTCCGTTGGTAGCCTTATGAATTAGGGTTTTTCTTACGCATC-TTCGTATGTGGA 301
Query 239 GATTTGGATCGTGTTCGGAAAACTTCTGGACACTCTCTTCGCTGCTAGA-TTTCGGATCA 297
|| ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||
Sbjct 302 GA-TTGGATCGTGTTCGGAAAACTTCTGGACACTGTCTTCGCTGCTAGATTTTTGGATCA 360
Query 298 -CCTTTTTGCGAAAATGGCAGCGCCAAGGCCGACGGGAGGCCAGGATCTGTTCGATACGT 356
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 361 TCC-TTTTGCGAAAATGGCAGCGCCAAGGCCGACTGGAGGCCAGGATCTGTTCGATACGT 419
Query 357 ATTTCAGGAGGGCAGATTTGGATGGAGATGGTCATATTAGTGGAGCTGAGGCTGTCGCTT 416
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ATTTCAGGAGAGCAGATTTGGATGGAGATGGTCATATTAGTGGAGCTGAGGCTGTCGCTT 479
Query 417 TCTTCCAGGGCTCGAATTTGCCTAAACATGTCCTTGCTCAGGTATGGTCCTATGCAGATT 476
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TCTTCCAGGGATCGAATTTGCCTAAACATGTCCTTGCTCAGGTATGGTCCTATGCAGATT 539
Query 477 CaaaaaaaGCTGGCTACCTTGGCCGACCGGAGTTTTATAATGCTCTAAAGTTGGTTACAG 536
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 540 CAAAAAAAGCCGGCTACCTTGGCCGAGCGGAGTTTTATAATGCTCTAAAGTTGGTAACAG 599
Query 537 TGGCACAAAGTAGACGGGAGTTGACTGCTGAAATAGTAAAGGCTGCAATTTATAGTCCTG 596
|||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||
Sbjct 600 TGGCACAAAGTAGACGAGAGTTGACTGCTGAGATAGTAAAAGCTGCAATTTATAGTCCTG 659
Query 597 CTTCCGCCAATATCCCTGCACCCAAAATAAATCTTGCTGCAACACCCTCTCCACAGCCCA 656
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 660 CTTCAGCCAATATCCCTGCACCCAAAATAAATCTTGCTGCAACACCTTCTCCACAGCCCA 719
Query 657 GGGGAGTTTTGCCTGCTACACAAGCTCAGGGAGTTACATCAATGCCATCAGTAGCAGCTG 716
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 720 GAGGAGTTTTGCCTGCTACACAAGCTCAGGGAGTTACATCAATGCCATCAGTAGCGGCTG 779
Query 717 GTGTGAGAGGGCCTCAAACGGGTGGAACTGTAAGTACTAGTAACCAACAAGTAGCCCCAG 776
|||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||
Sbjct 780 GTGTGAGAGGGCCTCACATGGGTGGAACTGTAAGCACTAGTAACCAACAAGTAGTCCCAG 839
Query 777 GCCAACAGAACCAGTTTACTGGGCTGCCTCCATCTCAGACGCAGCAAAACTTTCAAAGCC 836
||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||
Sbjct 840 GCCAACAGAACCAGTTTACTGGGATACCTCCATCTCAGACACAGCAAAACTTTCAAAGCC 899
Query 837 CGGGAATGCCAGCTGGAGGGACTAATGCACCTCGTCCTGCAAACCAACCTATGCCATCTG 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 CGGGAATGCCAGCTGGAGGGACTAATGCACCTCGTCCTGCAAACCAACCTATGCCATCTG 959
Query 897 ATTGGCTCAGCGGCAGAAGTGTTGGCCCCTCTGGGAACGTGAATTCTCAAATTCCTTCGA 956
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 960 ATTGGCTCAGCGGCAGAAGTGTTGGTCCCTCTGGGAACGTGAATTCTCAAATTCCTTCGA 1019
Query 957 GTCAGAATACATATGGTTTGACAGCACCTAATTCAACTGCCAACCATACACCAAAACAAC 1016
|||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct 1020 GTCAGAGTACATATGGTTTGACAGCACCTAATTCAACTGCCAACCATATAACAAAACCAC 1079
Query 1017 ATATGACACCTGCAGTAATAAGCTCTACAACAGCCAGACCCCAAGAATCAGCGCCTGTGC 1076
|||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1080 ATATAACACCTGCAGTAACAAGCTCTACAACAACCAGACCCCAAGAGTCAGCGCCTGTGC 1139
Query 1077 ACAAGCCCCAAGAATCATCTGCTACTTTTGGTGCTCGTGTTTCAGATGTTCCATCCAAGC 1136
|||| ||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||| |
Sbjct 1140 ACAATCCCCAAGAATCATCTGCTACTTTCGGTTCTCGTGTATCAAATGTTCCATCCAATC 1199
Query 1137 AATTGGTGGCCAAGGATCCCAAGGAACTGGCTGCATCAGGAAACGGGTTTGCCTCTGACT 1196
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1200 AATTGGTGCCCAAGGATCCCAAGGAACTGGCTGCATCAGGAAACGGGTTTACCTCTGACT 1259
Query 1197 CAATTTTCGGAGATGTCTTTTCAGTTACTTCCACCCAGCCAAAACAACATACTACAGGAA 1256
|| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct 1260 CACTTTTCGGAGATGTCTTTTCAGTTACTTCCACGCAGCCAAAACAACATCCTACGGGAA 1319
Query 1257 CTGCATCAACAATGGGCATCTCATCTGTTCCTGCTGGAACTGTTACGGGCCCTGAGATCA 1316
||||||||||| ||||||||||| ||| || |||||||||| |||||||||||||||
Sbjct 1320 GTGCATCAACAACAGGCATCTCATCGGTTACTACTGGAACTGTCGCGGGCCCTGAGATCA 1379
Query 1317 CTCAGTCTGTAGTTAGGCAAAGTTCAATCCCACAACAGGGTTCATTGAGCCAGCATGCTG 1376
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 CACAGTCTGTAGTTAGGCAAAGTTCAATCCCACAACAGGGTTCATTGAGCCAGCATGCTG 1439
Query 1377 TTGGTGTTCAGAATCAGCTTACTGGAAAATCAGGGCAACCATATGCTCCCTCAGGTGCGG 1436
|||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct 1440 TTGGTGTTCAGACCCAGCTTACTGGAAACTCAGGGCAACCATATACTTCCTCAGGTGCGG 1499
Query 1437 CTTCTGGTCCACCTGGCTCTACTGTTGGAGTTGGAATTTCTGCTTCCAATCAGTTGGCCC 1496
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct 1500 CTTCTGGTCCACCTGGCTCTACTGTTGGAGTTGGAATTTCAGCTACCAGTCAGTTGGCCC 1559
Query 1497 AGCGACCGccccacccccacccccatccccaaccacaaccccggccccaggtccagtccc 1556
|||| |||||||||||||| | | | |||||||||||||||||||||| ||||||||
Sbjct 1560 AGCGTCCGCCCCACCCCCA----C-T-CTCAACCACAACCCCGGCCCCAGGGCCAGTCCC 1613
Query 1557 aacccccGTGGCCAAAAATGACTCCAGCTGATGTCCAGAAATATACCAAGGTTTTTGTGC 1616
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 AACCTCCTTGGCCAAAAATGACTCCAGCTGATGTCCAGAAATATACCAAGGTTTTTGTGC 1673
Query 1617 AAGTTGACACTGATAGGGACGGAAAGATCACAGGGAACCAGGCTCGGAATCTGTTCTTAA 1676
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1674 AAGTTGACACTGATAGGGACGGAAAGATCACAGGGAACCAGGCTCGGAATTTGTTCTTAA 1733
Query 1677 GTTGGAGGCTTCCAAGAGAGGCTTTGAAGCAGGTATGGGATTTATCTGATCAAGATAATG 1736
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 GTTGGAGGCTTCCAAGAGACGCTTTGAAGCAGGTATGGGATTTATCTGATCAAGATAATG 1793
Query 1737 ACAGCATGCTCTCCTTGCGGGAGTTCTGTATTGCGGTTTATCTAATGGAGCGTTACAGAG 1796
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1794 ACAGCATGCTCTCCTTGCGGGAGTTCTGTATTGCGGTCTATCTTATGGAGCGTTACAGAG 1853
Query 1797 AGGGCCGACCTCTTCCCCCAATGTTCCCAAGCTCTATAATTCATAGTGAGAGCATGTTTA 1856
|||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |
Sbjct 1854 AGGGCCGACCACTTCCCCCAGTGTTCCCAAGCTCTATAATACATAGTGAGAGCATGTTCA 1913
Query 1857 CCTCTCCTGGTCAGTCTGTGGCACCACATGGCAATGCATCCTGGGGACATCCACAAGGTT 1916
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1914 CCTCTCCTGGTCAATCTGTGGCACCACATGGCAATGCATCCTGGGGACATCCTCAAGGGT 1973
Query 1917 TCCAACAGCAACCACATCCTGGGGCCTTGAGGCCACCAGCTGGTCCCAAAGGAAAGCCTC 1976
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 1974 TCCAACAGCAACCACATCCTGGGGGCTTAAGGCCACCAGCTGGTCCCAAAGGAAAGCCTC 2033
Query 1977 CGAGGCCAGTGCCTCTATCTCCTAGTGATGGAATGGTCCAGCCCACTCAGCCAAAGCGTA 2036
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2034 CGAGGCCAGTGCCTCTGTCTCCTAGTGATGGAATGGTCCAGCCCACTCAGCCAAAGCGTA 2093
Query 2037 AAATGCCTGTGTTGGAAAAACCGCTGGTGGATCAACTTAGCAAAGAGGAGCAGGATTCGC 2096
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2094 AAATGCCTGTGTTAGAAAAACCGCTGGTGGATCAACTTAGCAAAGAGGAGCAGGATTCAC 2153
Query 2097 TTAACTCAAAGTTTGAAGAAGCAACTGCTGTTGATAAAAAG 2137
| ||| | |||||||||||||||||||||||||||||||||
Sbjct 2154 TCAACACGAAGTTTGAAGAAGCAACTGCTGTTGATAAAAAG 2194
Score = 3157 bits (1709), Expect = 0.0
Identities = 1996/2127 (94%), Gaps = 49/2127 (2%)
Strand=Plus/Plus
Query 2138 GTGGATGAACTCGAAAAAGAAATAGCTGATTCCAAGCAGAAAATTGATTTCTTCCATGCT 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2285 GTGGATGAACTCGAAAAAGAAATAGCTGATTCCAAGCAGAAAATTGATTTCTTCCGTGCT 2344
Query 2198 AAGATGCAAGAACTTGTTTTATACAAGAGCAGATGTGACAACCGATACAATGAGATCGCA 2257
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2345 AAGATGCAAGAACTTGTTTTATACAAGAGCAGATGTGACAACCGGTACAATGAGATCGCA 2404
Query 2258 GAGAGAGTCTCGGGGGATAAACGTGAGCTTGAATCTCTAGCaaaaaaaTACGAGGAGAAA 2317
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2405 GAGAGAGTCTTGGGTGATAAACGTGAGCTTGAATCTCTAGCAAAAAAATACGAGGAGAAA 2464
Query 2318 TACAAGAAGGCTGGCAATGTAGGCTCTAAATTGACTATTGAAGAGGCCACGTTCCGTGAT 2377
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2465 TACAAGAAGTCTGGCAATGTGGGCTCTAAATTGACTATTGAAGAGGCCACATTCCGTGAT 2524
Query 2378 ATACAGGAGAAGAAAATGGAATTGTACCAGGCAATAGTCAAATTTGAAGAAGGCAAACTT 2437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2525 ATACAGGAGAAGAAAATGGAATTGTACCAGGCAATAGTCAAATTTGAAGAAGGCAAACTT 2584
Query 2438 GACGATAGTGTTGTTAAGGAGCGCACTGAACACATCCAATCAGGCCTTGAGGAACTGATC 2497
|| |||||| | ||| | ||||||||||||||||||| ||||||||||||||||||||
Sbjct 2585 GATGATAGTATAGTT-A--AGCGCACTGAACACATCCAGTCAGGCCTTGAGGAACTGATA 2641
Query 2498 AGAAATTTGAATGAGCGCTGCAAACACTATGGAGTACGTGGGAAACCCACTTCTCTGGTT 2557
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2642 AAAAATTTGAATGAGCGCTGCAAACAATATGGAGTACGTGGGAAACCCACTTCTCTGGTT 2701
Query 2558 GAGCTTCCTTTTGGTTGGCAGCCTGGAATCCAGGAAGGTGCTGCTGATTGGGATGAAGAT 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2702 GAGCTTCCTTTTGGTTGGCAGCCTGGAATCCAGGAAGGTGCTGCTGATTGGGATGAAGAT 2761
Query 2618 TGGGATAAGCTAGAGGAGGAAGGGTTTACCTTCGTCAAGGAGCTCACACTTGATATTCAA 2677
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2762 TGGGATAAGCTAGAGGACGAAGGGTTTACCTTCGTCAAGGAGCTTACACTTGATATTCAA 2821
Query 2678 AATGTCATAGCCCCACCAAAGGAAAAATCATCAGCGTGGAAG-AAAGAAGTTGCTGTCTC 2736
||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct 2822 AATGTCATAGCCCCACCAAAGGAAAAATCATCAGCGTGG-AGAAAAGAAGTTGATGTCTC 2880
Query 2737 TTCCAAAGAAGGTGAAGAGGCTTCATCCTCAGATGCTGACTCTAAAACGGGGAAAAAGCA 2796
||| |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct 2881 TTCAAAAGAAGGTGAAGATGTTTCATTCTCAGATGCTGACTCTAAAACGGGGAAAAAGCA 2940
Query 2797 AGGCAGTGGTGAAGAGGCTTCTGAGAAGGAACCAACATCTGAGCAGTCAGAGGGTAAAAC 2856
| |||||||| || |||| | | |||||||||||||||||||||||
Sbjct 2941 AAGCAGTGGT---GA--------AGAA-G-----A-TTCTGAGCAGTCAGAGGGTAAAAC 2982
Query 2857 ATCCGATGTTGATGCCAGAGATAAAAACGGATCTCTGGATGACTCTAATGTTAGAAAGGG 2916
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2983 ATCCGATGTTGATGCCAGAGATAAAAACGGATCTCTGGATGACTCTAAAGTTAGAAAGGG 3042
Query 2917 CATTGAAGCTGATAGTTCACCCCGAACTAAAG--A-GAAGAGTGAAAATGGCCATGATGA 2973
||||||||||||||||||||| ||||| |||| | || |||||||||||||||||||||
Sbjct 3043 CATTGAAGCTGATAGTTCACCTCGAACGAAAGATACGAGGAGTGAAAATGGCCATGATGA 3102
Query 2974 TGGTGAATCTACTGCTTCTGCTGGTAAAACTGTAAATTATGACTCTCATGACGAGACAGA 3033
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 3103 TGGTGAATCTACTGCTTCTGCTGGCAAAACTGTAAATTATGACTCTCACGACGAGACAGA 3162
Query 3034 TTCAGTTTCAAGCTTGAACCCTG---ACGGAAAGGACAAGGATCATGAGAAGTATGGCAG 3090
||||||||||||| | ||||||| |||| |||||||||||||||| |||||||| |||
Sbjct 3163 TTCAGTTTCAAGCGTCAACCCTGACAACGGCAAGGACAAGGATCATGGGAAGTATGACAG 3222
Query 3091 TGGTTTTGGCTTTGGATTTGGATTTGATGACTTCAGTATTAAACCTATAAAAACTGGTTC 3150
||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 3223 TGGTTTTGGATTTGGATTTGGGTTTGATGACTTCAGTATTAAGCCTATAAAAACTGGTTC 3282
Query 3151 GACCATTTCAAATGACTTCCTCCCTCCTCCTAAGTTATCTATATTTGCTGATTCTGTCCC 3210
||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 3283 GACCATTTCAAATGACTTCCT--C-CCTCCTAAGTTATCTATATTTGCTGATTCCGTCCC 3339
Query 3211 AAGCACACCGGCAAATGCAAGCGATGTTTCCCCTACAAAACCTTCTTTGTTTGCTGACTC 3270
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 3340 AAGCCCACCGGCAAATGCAAGCGACGTTTCCCCTACAAAACCTTCTTTGTTTGCTGATTC 3399
Query 3271 AGTTCCGAGCACTCCAGCGACGAACAATGCCTCTTACGCAGGCCAGAAATCATTCTTTGA 3330
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 3400 AGTTCCGAGCACTCCAGCGACGAACAATGCCTCTTACCCAGGCCAGAAATCATTTTTTGA 3459
Query 3331 CGACTCTGTCCCGAGCACTCCTGCTTATCCAGGCAACTTGTTTGCCGAAAAGAAATCCTT 3390
||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 3460 TGACTCGGTCCCGAGCACTCCTGCTTATCCAGGCAACTTGTTTGCTGAGAAGAAATCCTT 3519
Query 3391 CTTTGACGACTCTGTCCCGAGCACTCCTGCTTACCCAGGCAACTTGTTTGCCGAGAAGAA 3450
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 3520 CTTTGACGACTCTGTCCCGAGCACCCCTGCTTATCCAGGCAACTTGTTTGCCGAGAAGAA 3579
Query 3451 ATCATTTTTCGATGACTCTGTCCCGAGCACTCCTGCTTATAGCACGTCTGATTTTGGTGG 3510
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3580 ATCCTATTTCGATGACTCTGTCCCGAGCACTCCTGCTTATAGCACGTCTGATTTTGGTGG 3639
Query 3511 GAAGCCATTTGCATCAGAGACTCCTCGTTCAGACAACCTGTTCCCAGGAAGAAGTCCCTT 3570
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3640 GAAGCCATTTGCATCAGAGACTCCTCGTTCAGACAACCTGTTCCCAGGAAGAAGCCCCTT 3699
Query 3571 CATGTTCGACTCTGTCCCAAGTACACCTGC---ACACGATGACTTCTCTAACAACAGCTT 3627
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 3700 TATGTTCGACTCTGTCCCAAGTACACCCGCCGCACACGATGACTTCTCTAACAACAGCTT 3759
Query 3628 CTCCCGTTTCGATTCATTCAACA--A-CAAC---GATGCTTTCTCTCTATCCCGCACAGA 3681
|||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 3760 CTCCCGCTTCGATTCATTCAACAGCAACAACAACGATGCTTTCTCTCTATCCCGCACAGA 3819
Query 3682 CTCAATGCGCAGCACAAGCGAGCCTGACCCATTCGCATCCAGGTTTGATTCGTTCAACTA 3741
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 3820 CTCGATGCGCAGCACAAGCGAGCCTGACCCATTCGCATCAAGGTTTGATTCTTTCAACTA 3879
Query 3742 TCAAAGATATGATTCCTTCAATGCACAAAGCTTTGATTCCTCTAGCAACAACAACGCATC 3801
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 3880 TCAAAGATATGATTCCTTCAATGCACAAAGCTATGATTCCTCTAGCAACAACAATGCATC 3939
Query 3802 GGAGACACCTAAAGCCTCATTGACGAGATTCGACTCAATCGGAAGCACCAGAGACTCTGA 3861
|||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 3940 GGAGACGCCTAAAGCCTCATTGACAAGATTCGACTCAATTGGAAGCACCAGGGACTCTGA 3999
Query 3862 TTACAGTCACGGGTTTGGGTTCGACGACCATGACCCTTTCGGTTCTACAGGACCATTCAA 3921
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4000 TTACAGTCATGGGTTTGGGTTCGACGACCATGACCCGTTCGGTTCTACAGGACCATTCAA 4059
Query 3922 AACAACGACAACTACAGCAGAGACACCTCGGAGTTCTGATAATTGGAATGCATTCTAGCC 3981
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4060 AACAACGACAACTACAGCAGAGACACCTCGGAGTTCTGATAATTGGAATGCTTTCTAGCC 4119
Query 3982 ACAAGCCCACGTGTGATATGAAATATGATCACATATCATATACTTTGCTGCTTCTATAGT 4041
| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 4120 AGAAGCCCACGTGCGATATGAA-TATGATCACATATCATATACTTTGCTGCTTTTATAGT 4178
Query 4042 TTGAATT-ACCAGTGGAAGAGTTATATGTATCTTCATTTCTTTGGTTTCACCTGCTTGCT 4100
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4179 TTGAATTTACCAGTCGAAGAGTTATATGTATCTTCATTTCTTTGGTTTCACCTGCTTGCT 4238
Query 4101 TCATTTTTTATTGTTAATATATAATAGTCTTTTT-GCCATTTTAT-----AAGGATTTAA 4154
|||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct 4239 TCATTTTTTATTGTTAATATATAATAGTCTTTTTTGCCATTTTTTCTTTTAAGGATTTTT 4298
Query 4155 CGAAGAGTGTCCTTTGTTGCTCTCTGAGTAGTATTTCTTTTTCCTTGTTTCTTTGTTTGT 4214
||||||||||||||||||| |||||| ||||| ||||||||| |||| |||||||||||
Sbjct 4299 CGAAGAGTGTCCTTTGTTGGTCTCTGCGTAGTGTTTCTTTTTATTTGTGTCTTTGTTTGT 4358
Query 4215 TAGCTTGAATAATGAATTCTTATTTGT 4241
|| ||||||||||||||| ||||||||
Sbjct 4359 TAACTTGAATAATGAATTATTATTTGT 4385
Score = 163 bits (88), Expect = 1e-38
Identities = 103/110 (94%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 3315 AGAAATCATTCTTTGACGACTCTGTCCCGAGCACTCCTGCTTATCCAGGCAACTTGTTTG 3374
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3510 AGAAATCCTTCTTTGACGACTCTGTCCCGAGCACCCCTGCTTATCCAGGCAACTTGTTTG 3569
Query 3375 CCGAAAAGAAATCCTTCTTT-GACGACTCTGTCCCGAGCACTCCTGCTTA 3423
|||| |||||||||| ||| || ||||||||||||||||||||||||||
Sbjct 3570 CCGAGAAGAAATCCTA-TTTCGATGACTCTGTCCCGAGCACTCCTGCTTA 3618
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 215166018527
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5