BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472412 Length=3241 Score E Sequences producing significant alignments: (Bits) Value AT1G21730.1 | Symbols: | P-loop containing nucleoside triphosp... 5136 0.0 > AT1G21730.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:7630107-7636594 FORWARD LENGTH=3278 Length=3278 Score = 5136 bits (2781), Expect = 0.0 Identities = 3134/3293 (95%), Gaps = 70/3293 (2%) Strand=Plus/Plus Query 1 AAATTCATATATAGAATTGTTTTGTAACCAATTAGGTAGCAGTACTTTAATATCTGAGGC 60 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 4 AAATTCATTTACAGAATTGTTTTGTAACCAATTAGATAGCAGTACTTTAATATCTGAGGC 63 Query 61 TATTTTCG------TC-----A-------tttttttGGAGGGAGTGGGAACaaaaaaaTC 102 |||||||| || | ||||||||||||||||||||| ||||||||| Sbjct 64 TATTTTCGTCATTTTCAAATTATGGTGTGTTTTTTTGGAGGGAGTGGGAAAAAAAAAATC 123 Query 103 GATACATGAATGACGTGACCTCCATTGATTTCGGCGAACGAG---------CTT--CT-T 150 |||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct 124 GATACATGAATGACGTGACCTCCATTGATTTCGGCGAACGAGCTTCTTCTTCTTCCCTCT 183 Query 151 C-C-CTCTC--T--C-CC-TCTC--ACAGTAACTGTCTCTTGGAACCA-TTCCTCTTTCA 199 | | ||||| | | || |||| ||||||||||||||||||||||| |||||| |||| Sbjct 184 CTCTCTCTCTTTGGCTCCATCTCTTACAGTAACTGTCTCTTGGAACCATTTCCTC-TTCA 242 Query 200 CTAGTACCTTC-AACAATGTCTGCTACTAGGTCACAGAGATCATCCACGATCTCGCCGGC 258 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 CTAGTATCTTCTAACAATGTCTGCTACTAGGTCACAGAGATCATCCACGATCTCGCCGGC 302 Query 259 TCGTCCTCGTAGATCGCCGGCGACTATTCCGATGAAACGGCCGGAAACTCCTTCTTCCTC 318 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 303 TCGTCCTCGTAGATCGCCGGCGACTATTCCGATGAAACGTCCGGAAACTCCTTCTTCCTC 362 Query 319 TCACTTTTCTGCCTCTCCGGCTACTTCTTCTAGTCCATTATTACGTTCTAGTCCTAGTCC 378 |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 363 TCACTTTTCTGCTTCTCCGGTTACTTCTTCTAGTCCATTACTACGTTCTAGTCCTAGTCC 422 Query 379 GTCTACTTCCTCCGCCGCCGCCTCTGGTACGGTTGTTGCTTCCACGAAACTGAAGGAGAA 438 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 423 GTCTACTTCCTCCGCCGCCGCCTCTAGTACGGCTGTTGCTTCCACGAAACTGAAGGAGAA 482 Query 439 TATTACAGTCACGATTCGGTTTCGTCCTCTCAGTCCACGAGAGGTCAATAATGGAGATGA 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 TATTACAGTCACGATTCGGTTTCGTCCTCTCAGTCCACGAGAGGTCAATAATGGAGATGA 542 Query 499 GATTGCCTGGTATGCAGATGGAGACTATACTATTAGGAATGAGTACAATCCAGCTCTTTG 558 |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 543 GATTGCGTGGTATGCAGATGGAGACTATACTATTAGGAATGAGTATAATCCATCTCTTTG 602 Query 559 TTATGGATTTGATAGGGTATTTGGTCCACCAACCACTACTCGGCGTGTTTATGATATTGC 618 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 603 TTATGGATTTGATAGAGTATTTGGTCCACCAACAACTACTCGGCGTGTTTATGACATTGC 662 Query 619 TGCTCAACAAGTTGTTAGTGGGGCAATGTCAGGGATTAATGGTACTGTGTTTGCTTATGG 678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 TGCTCAACAAGTTGTTAGTGGGGCAATGTCAGGGATTAATGGTACTGTGTTTGCTTATGG 722 Query 679 AGTTACTAGCAGCGGGAAGACTCACACAATGCATGGGGAGCAAAGGTCACCTGGAATAAT 738 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 723 AGTTACTAGCAGTGGGAAGACTCATACAATGCATGGGGAGCAAAGGTCACCTGGAATAAT 782 Query 739 TCCGTTGGCGGTAAAGGATGTATTTAGCATTATTCAGGAGACACCAGAACGGGAATTTCT 798 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 783 TCCGTTGGCTGTAAAGGATGTATTTAGCATTATTCAGGAGACACCAGAACGGGAATTTCT 842 Query 799 TCTTCGTGTTTCGTATCTAGAGATATACAATGAGGTCATCAATGACTTACTAGATCCAAC 858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 TCTTCGTGTTTCGTATCTAGAGATATACAATGAGGTCATCAATGACTTACTAGATCCAAC 902 Query 859 AGGGCAGAATCTAAGAATACGAGAGGATGCTCAGGGCACATATGTTGAAGGTATAAAAGA 918 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 903 AGGGCAAAATCTAAGAATACGAGAGGATTCTCAGGGCACATATGTTGAAGGTATAAAAGA 962 Query 919 TGAGGTTGTCTTATCCCCTGCCCATGCTCTATCCCTAATAGCATCTGGAGAAGAACACAG 978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 963 TGAGGTTGTCTTATCCCCTGCCCATGCTCTATCCCTAATAGCATCTGGAGAAGAACACAG 1022 Query 979 GCATGTTGGTTCAAATAATGTCAATCTTTTTAGCAGTCGGAGCCACACAATGTTCACCTT 1038 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1023 GCATGTTGGTTCAAATAATGTCAATCTTTTCAGCAGTCGGAGCCACACAATGTTCACCTT 1082 Query 1039 GACTATAGAAAGCAGTCCACATGGAAAAGGAGATGACGGCGAAGATGTTAGTCTCTCACA 1098 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1083 GACTATAGAAAGCAGTCCACATGGAAAGGGAGATGACGGCGAAGATGTTAGTCTCTCACA 1142 Query 1099 ATTGCACCTTATTGATCTTGCTGGATCTGAAAGTTCTAAAACTGAAATAACTGGACAGCG 1158 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1143 ATTGCACCTTATTGATCTTGCTGGGTCTGAAAGTTCTAAAACTGAAATAACTGGACAGCG 1202 Query 1159 GAGGAAAGAGGGCTCTTCCATCAATAAAAGTTTACTCACT-TTAGGCACTGTTATATCTA 1217 ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| Sbjct 1203 AAGGAAAGAGGGCTCTTCTATCAATAAAAGTTTACTCACTCTT-GGCACTGTTATATCTA 1261 Query 1218 AATTGACAGACACCAAGGCAGCTCATATACCCTACAGGGATTCTAAACTTACGCGTCTCT 1277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 AATTGACAGACACCAAGGCAGCTCATATACCCTACAGGGATTCTAAACTTACGCGTCTCT 1321 Query 1278 TGCAGTCAACACTTAGTGGTCATGGACGAGTATCACTTATTTGCACTATCACACCTGCAT 1337 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1322 TGCAGTCAACACTAAGTGGTCATGGACGAGTGTCACTTATTTGCACTATCACACCTGCAT 1381 Query 1338 CCAGCACAAGTGAAGAAACGCACAACACACTAAAATTCGCTCAGAGGTGCAAGCATGTTG 1397 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 1382 CCAGCACAAGTGAAGAGACGCACAACACACTGAAATTCGCTCAGAGGTGCAAGCATGTTG 1441 Query 1398 AAATCAAAGCTTCACGAAATAAGATTATGGATGAAAAGTCCCTTATAAAAAAGTATCAGA 1457 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1442 AAATCAAAGCTTCACGAAATAAGATTATGGATGAGAAGTCCCTTATAAAAAAGTATCAGA 1501 Query 1458 AAGAAATATCGTGTTTACAAGAGGAACTTACGCAGTTGAGGCGCGGAAACCAAGAAGATT 1517 |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||| Sbjct 1502 AAGAAATATCGTGTTTACAAGAAGAACTTACGCAATTGAGGCACGGAAACCAAGATGATT 1561 Query 1518 TGGCTGATCGAAAACTTCAGGTTAAACTTCAGTCAAGGTTGGAGGAGGATGAAGAAGCCA 1577 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1562 TGGCTGATCGAAAACTTCAGGTTAAACTTCAGTCAAGGTTGGAGGATGATGAAGAAGCCA 1621 Query 1578 AAGCAGCTCTGATGGGAAGAATTCAGCGATTGACAAAATTAATCTTGGTTTCAACAAAAA 1637 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1622 AAGCAGCTCTGATGGGAAGAATTCAGCGATTGACAAAGTTAATCTTGGTTTCAACAAAAA 1681 Query 1638 GTTCACTCCAAGCTGCTTCTGTAAAACCTGACCATATATGGAGGCAAGCTTTTGGAGAGG 1697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1682 GTTCACTCCAAGCTGCTTCTGTAAAACCTGACCATATATGGAGGCAAGCTTTTGGAGAGG 1741 Query 1698 ATGAGCTAGCATACTTGCCCGATAGAAGACGGGAGAACATGACTGATGATGGTGCTGTAA 1757 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1742 ATGAGCTAGCATACTTGCCCGATAGAAGACGGGAGAACATGGCTGATGATGGTGCTGTAA 1801 Query 1758 GCACAGTTTCTGAACATTTGAAGGAGCCAAGAGATGGCAATAGTAGTCTGGACGAGATGA 1817 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1802 GCACAGTTTCTGAACATTTAAAGGAGCCAAGAGATGGCAATAGTAGTCTGGACGAGATGA 1861 Query 1818 CAAAGGACAGGA-AGAGGAACAAGACTCGTGGAATGCTTGGCTGGCTAAAACTGAAAAAA 1876 |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1862 CAAAGGACAGGAGAAAG-AACAAGACTCGTGGAATGCTTGGCTGGCTAAAACTGAAAAAA 1920 Query 1877 TCTGATGGTGTGGCCGGGACATTGCCGACTGATGGTAACCAGAGCCAAGCAAGTGGATCT 1936 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 TCTGATGGTGTGGCCGGGACATTGCCGACTGATGGTAACCAGAGCCAAGCAAGTGGATCT 1980 Query 1937 CCTTCATCTTCTTCTAAGTGTACACAAACAAAAACAACCAGAAGAGAAAATGCAGCAGCT 1996 ||||||||||| || |||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct 1981 CCTTCATCTTCCTCCAAGTATACACAAACAAAAACAACTAGAAGAGAAAATGCAGCGGCT 2040 Query 1997 ATCAAGTCTTTTCCAGAAAAAACTGTTGCTGGAGACTTGTTCAGTGCTACTGTTGGACCA 2056 || |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2041 ATTAAGTCTATTCCGGAAAAAACTGTTGCTGGAGACTTGTTCAGTGCTACTGTTGGACCA 2100 Query 2057 GGAGACCCTTATCCGATTGGAACTACTATTGCGGATCAAATGGATCTTCTTCATGAGCAG 2116 | |||| | | ||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 2101 GAAGACTCGTCTCCGACTGGAACTACTATTGCGGATCAAATGGATCTTCTTCACGAGCAG 2160 Query 2117 ACAAAAATACTTGTTGGAGAAGTAGCGTTGCGTACCAGTTCATTAAATCGGCTTTCCGAA 2176 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 2161 ACAAAAATACTTGTTGGAGAAGTAGCCTTACGTACCAGTTCATTAAATCGGCTTTCCGAA 2220 Query 2177 CAAGCTGCTCGCAACCCTGAGGATTTTCACATCAGAGATCAAATACAGAAATTAGAAGAT 2236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2221 CAAGCTGCTCGCAACCCTGAGGATTTTCACATCAGAGATCAAATACAGAAATTAGAAGAT 2280 Query 2237 GAAATCAGTGAAATTAAGGATCAAATACGTGTTCTCGAGCAACGAATTATTGAGATTTTC 2296 |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2281 GAAATCAGCGAAAAGAAGGATCAAATACGTGTTCTCGAGCAACAAATTATTGAGATTTTC 2340 Query 2297 GGAATGACTCCCTATGCCGCAGATTCTCTTGGAATGTCCCAGGTTCTGTCAAAGCTCACA 2356 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 2341 GGAATGACTCCCTATGCCTCAGATTCTCTTGGAATGCCCCAGGTTCTGTCAAAGCTCACG 2400 Query 2357 ATGCAACTAAATGAGAAAATCTTTGAACATGAGATAAAGTCTGCAGACAATAGGATACTT 2416 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2401 ATGCAACTAAATGAGAAAATATTTGAACATGAGATAAAGTCTGCAGACAATAGGATACTT 2460 Query 2417 CAGGAGCAGTTGCAGATGACTAAATCAGAAAACGCTGAGATGCAAGAGACAATCATTCTA 2476 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2461 CAGGAGCAGCTGCAGATGACTAAATCAGAAAACGCTGAGATGCAAGAGACAATCATTCTA 2520 Query 2477 CTAAGACAACAACTAGATTCGTTAGCCGAGAGACAATCAACACAGCAAATCGCAGGAGAT 2536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2521 CTAAGACAACAACTAGATTCGTTAGCCGAGAGACAATCAACACAGCAAATCGCAGGAGAC 2580 Query 2537 GAATCATCAGGGAAGAATACTCACAACAGAAATTGTGAGGAGTCAGAAATATACTCTGGA 2596 ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| Sbjct 2581 GAATCATCAGGGAAGAATATTCACAACAGAAATGGTGAAGAGTCAGAAATATACTCTGGA 2640 Query 2597 GCAGGAACACCGACTAGCGTGATGAGTTTAAATAGAGTATTTGCTCAGGAAGAGACTAAA 2656 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2641 GCAGGAACACCGACCAGCGTGATGAGTTTAAATAGAGTATTTGCTCAGGAAGAGACTAAA 2700 Query 2657 GAGATCAACAACGAAACAGCTCTCAACTCTCAGGCATTGGAAATAGAGAATCTGAAGAAG 2716 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2701 GAGATCTACAACGAAACAGCTCTCAACTCTCAGGCATTGGAAATAGAGAATCTGAAGAAG 2760 Query 2717 GAGAAGATGAGATTGATTGAGGAAAAAGATGAGCTTGGAAAACTTAACAAGAAACTCACT 2776 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2761 GAGAAGATGCGATTAATTGAGGAAAAAGATGAGCTTGGAAAACTTAACAAGAAACTCACT 2820 Query 2777 GAAGAAGCTTCTTATGCTAAAGAATTGGCGTCTGCCGCAGCAGTAGAACTCCAGAATTTG 2836 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 2821 GAAGAAGCTTCATATGCTAAAGAATTGGCGTCTGCTGCAGCAGTAGAACTTCAGAATTTG 2880 Query 2837 GCTGAAGAAGTTACCAGACTCTGCAATGAAAACGCGAAACTCAGCAGGTGAAAAAGTTCC 2896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2881 GCTGAAGAAGTTACCAGACTCTGCAATGAAAACGCGAAACTCAGCAGGTGAAAAAGTTTC 2940 Query 2897 AGGTCTCTCTGTTGTTGCTCGGAGACTCC-AGATTCAAGATAAATGCTGCAAAGTAAATC 2955 ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| Sbjct 2941 AGGTCTCTCTGTTGTTGCTCGGAGACTCCCAGCTTCAAGATAA-TGCTGCAAAGTAAATC 2999 Query 2956 ATCAT-GATTGACCTATAATGCAAATCTCAGACT--ACTTGGAAGGTGTTGATGTTGATC 3012 ||| | | ||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 3000 ATCTTCG-TTGACATATAATGCAAATCTCAGACTCTACTTGGAAGGTAATGATGTTGATC 3058 Query 3013 CATCAAAGGGATCAAGAGATCATGATGCTCCCAAAGGCA---A-TCCAGAAAAACTGGTT 3068 ||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||| Sbjct 3059 CATCAAAGGGAACAAGAGATCATGATGCTCCCAAAGGCATTCAATCCAGAAAAAATGGTT 3118 Query 3069 TGTATTGCTTCGATAGTATTTTGATTCTAACGTCTGATGACAAACACATGATGTAAATAA 3128 |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 3119 TGTATTGCTTGGATAGTATTTTGATT--A-CGTCTGATGACAAACACATGATGTAAATA- 3174 Query 3129 TTGAATATTCTCACAAATTTGTTTTCTTGTTCGCAGTGACCACTATTTTTGTATGTTCGT 3188 || ||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 3175 TTC------CTCACAAATTTGTTTTCTTGTTCTCAGTGACCACTATTTTTGTATGTTC-T 3227 Query 3189 CTTAGGTTGAATCGATGATGTTGCAACAAGTTCCATAGTTAGTTTTTCAGCTT 3241 | |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 3228 -T-AGGTTGAATCAATGATGTTGCAACAAGTTCCATAGTTAGTTTTTCAGCTT 3278 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 161236554802 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5