BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472413
Length=2829
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21740.1 | Symbols: | Protein of unknown function (DUF630 a... 4440 0.0
AT1G77500.1 | Symbols: | Protein of unknown function (DUF630 a... 82.4 2e-14
> AT1G21740.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr1:7641580-7645078 FORWARD LENGTH=2862
Length=2862
Score = 4440 bits (2404), Expect = 0.0
Identities = 2716/2863 (95%), Gaps = 35/2863 (1%)
Strand=Plus/Plus
Query 1 ATGGGTTGCGGAGGATCCAAAGTAGATGATCAACCACTTGTGATTCTCTGTAGAGAGAGG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTTGCGGAGGATCCAAAGTAGATGATCAACCACTTGTGATTCTCTGTAGAGAGAGG 60
Query 61 AAAGAACTTATCAAAGCTGCGTCTCATCATCGTTGTGCTTTAGCCGCTGCTCATCTCTCT 120
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 61 AAACAACTCATCAAAGCTGCTTCTCATCATCGTTGTGCTTTAGCCGCTGCTCATCTCTCT 120
Query 121 TACTTTCAATCTCTCTGTGACGTTGGTGAATCTATTAAACGTTTCGTCGACGAAGAACTT 180
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 121 TACTTTCAATCTCTCTGTGACGTTGGTGATTCCATTAAACGTTTCGTCGACGAAGAACTC 180
Query 181 GTCGTCGTTGGTACTTCTTCTTCTTCTACCCCTGATTCTCCGGTTCTTACGCTTCCGTCT 240
||| ||||||| ||||||||||||||| ||||||||||||| |||||||| ||||| ||
Sbjct 181 GTCCTCGTTGGGACTTCTTCTTCTTCTTCCCCTGATTCTCCTGTTCTTACTCTTCCTTCC 240
Query 241 GACGAAGGGAAGCCTCATAAACACAAGATCTCGTCTTCTTCAACTTCGGTTTCGCATTCG 300
|||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 241 GACGAAGGGAAGCCACATAAACACAAGATCTCCTCTTCTTCAACCTCTGTTTCGCATTCG 300
Query 301 GTTATTGAAGACGACGGA-GAAGAAGGAGGAGAAGATCAGCATTTGCATTTATCATCTGG 359
||||||||||||||| || |||| || |||||||||||||||||||||||||||||||||
Sbjct 301 GTTATTGAAGACGAC-GACGAAGGAGAAGGAGAAGATCAGCATTTGCATTTATCATCTGG 359
Query 360 ATCCGAGTTAGATTCTGGATCGGAATCTGGATCTGATGGTTCATTAGGTCATATCCACAT 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 360 ATCCGAGTTAGATTCTGGATCGGAATCTGGATCTGATGATTCATTAGGTCATATCCATAT 419
Query 420 TGAAACTAGCCCTAAAGTGAAGGAGAAAGAAACACGCTTACCGGAAAATT---A---C-- 471
||||||||||||||||||||| |||||||||||||||||||||||||||| | |
Sbjct 420 TGAAACTAGCCCTAAAGTGAAAGAGAAAGAAACACGCTTACCGGAAAATTACCAGCCCGG 479
Query 472 ----C-A----G----C---CCGGTTATCCGCCTGGTTTTACGCCGGGATATCAATATCA 515
| | | | ||||||||| ||| ||||||||||||||||||||||||||
Sbjct 480 TTATCAATCCGGTTATCAATCCGGTTATCAGCCCGGTTTTACGCCGGGATATCAATATCA 539
Query 516 ACCGGGTTACTCTGCTGGGTATCAGTATCCGGTTGAAGGATGGGGATTTATGGGAGAGAA 575
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 540 ACCGGGTTACTCGGCTGGGTATCAGTATCCGGTTGAAGGATGGGGATTCATGGGAGAGAA 599
Query 576 TCCGGATTTAAACCCGTACCCGAA--C---CC-GAATCCGGGAATGTATTTTATGAAGAA 629
|||| ||||||||||||||||||| | || ||||||||||||||| |||||||||||
Sbjct 600 TCCGAATTTAAACCCGTACCCGAATCCGAACCAGAATCCGGGAATGTACTTTATGAAGAA 659
Query 630 GTCTGCGCCACCGTCACGACCGGTAGTGTTTCAGCCGGAGAATCATAGAGTGGAGAATGG 689
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GTCTGTGCAACCGTCACGACCGGTAGTGTTTCAGCCGGAGAATCATAGAGTGGAGAATGG 719
Query 690 GCAATGGTTGCCGGAGAATGGATTTGGGTACTCTAATTATTTTCCAGGAAACGCGAATAC 749
|||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||
Sbjct 720 GCAATGGTTGCCGGAGAATGGAGTTGGGTATTCTAATTATTACCCAGGAAACGCTAATAC 779
Query 750 TGGGTATTTTGGTTACCCGGAGCAACGTAGAGAGCCACCGTCTCCGGTGAGACCGACTCC 809
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 780 TGGGTATTTTGGTTACCCGGAGCAACGTAGAGAGCCACCGTCTCCGGTGAGGCCGACTCC 839
Query 810 AGCGCCTCCGTCTCCGCCTAAGATCTCAAGTTGGGATTTTTTGAATGTGTTTGATACTTA 869
||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 840 AGCACCTCCGTCTCCGCCTAGGATTTCAAGTTGGGATTTTTTGAATGTGTTTGATACTTA 899
Query 870 TGATTATAATAGAGCTGGTGGTGGTGAAAGTTCCGGTGCCGGAGTTGGGTTTTCTCCGGC 929
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||
Sbjct 900 TGATTATAATAGAGCTGGTGGTGGTGAAAGTTCCGGTGCCGGAGCTGGGTTTTTTCCAGC 959
Query 930 CATGGGTGGAGGTAAGTCAAATTCAAGCAGTCCTGATTCGAGGGAAGTGAGAGAGAGGGA 989
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 960 CATGGGTGGAGGTAAGTCGAATTCAAGTAGTCCTGATTCGAGGGAAGTGAGAGAGAGGGA 1019
Query 990 AGGGATTCCTGAGTTGGAAGAAGAAACAGAGCAAGAAGTTATCATTGGGCAAACGTTTAA 1049
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1020 AGGGATTCCTGAGTTGGAAGAAGAAACAGAGCAAGAAGTTATCTTTGGGCAGACGTTTAA 1079
Query 1050 ACATATGAAGAGAAAAGGCATTGAGAAGGTGAAAGAACAACACAGACCGGAGAATGAGAT 1109
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1080 ACATATGAAGAGAAAAGGCATTGAGAAGGTGAAAGAACAACACAGACAGGAGAATGAGAT 1139
Query 1110 TCACGAGAGAAAGATCAAGAAACGAGGAGATTCAGGTGAAGGAACATCAAGGGCAGTGCC 1169
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1140 TCACGAGAGAAAGATCAAGAAACGAGGAGATTCAGGTGAAGGAACTTCAAGGGCAGTGCC 1199
Query 1170 TATGGTAGAAAGGGCTACGGAGAGCTCTTTTGGTTCAAAGACTGTGTCTTCGTTTTCGAG 1229
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1200 TGTGGTAGAAAGGGCTACGGAGAGCTCTTTTGGTTCAAAGACTGTGTCGTCGTTTTCGAG 1259
Query 1230 TAGTGAAGAAGAATCTGAGTTTCATCATGTTAATGACGGAGAAGGAAAGAGTAGCAGTAA 1289
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1260 CAGTGAAGAAGAGTCGGAGTTTCATCATGTTAATGATGGAGAAGGGAAGAGTAGCAGTAA 1319
Query 1290 TGATTTAAGTGGGCATGAGACAGTTGCCACTAAGAGTGTTGGAGAAGTAGAAGAAGAATA 1349
||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1320 TGATTTAGGTGGGCATGAGACGGTTGCTACTAAGAGTGTTGGAGAAGTAGAAGAAGAATA 1379
Query 1350 TGTGAGGAAGAAAGGAGTGAGCTTTGAGTTGGATGAAAATGCAACTACTTCTTTTGATGT 1409
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1380 TGTGAGGAAGAAAGGAGTTAGCTTTGAGTTGGATGAAAATGTAACTACTTCTTTTGATGT 1439
Query 1410 TGAATCTTCCAAAATAAGTAGTCTGTCTGCATTGTCGGTTCATGCCACTAGAGATCTCAG 1469
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1440 TGAATCTTCCAAGATTAGTAGTCTATCTGCATTGTCGGTTCATGCCACTAGAGATCTTAG 1499
Query 1470 AGAAGTTGTGAAAGAGATCAAGAGTGAGTTTGAGGTTGCTTCTTCACATGGGAAGGAAGT 1529
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AGAAGTTGTGAAGGAGATCAAGAGTGAGTTTGAGGTTGCTTCTTCACATGGGAAGGAAGT 1559
Query 1530 GGCTGTGTTGCTTGAGGTTAGCAAGTTGCCTTATCAGCAGAAAAGCTCGGGGCTCAAAGT 1589
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1560 GGCTGTGTTGCTTGAGGTTAGCAAGTTGCCTTATCAGCAGAAAAGTTCGGGGCTCAAAGT 1619
Query 1590 TATCTTCTCCCGGATCATGTATCTGGTAGCGCCATCCACAGTGTCATCGCGCTCTCAGCC 1649
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct 1620 CATCTTCTCCCGGATCATGTATCTGGTTGCACCATCCACAGTTTCATCGCGCTCTCAGCC 1679
Query 1650 TCAACCGTCAATACGGTTAACATCTAGGATATTGAAAATTGCAAAATCATACAATGGTCA 1709
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 TCAACCGTCAATACGTTTAACATCTAGGATATTGAAAATTGCAAAATCATACAATGGTCA 1739
Query 1710 GGATATCAGAGAAGGCTTATCTGGAAACCTCTCTTCAACCTTGGAGCAACTCTATGCCTG 1769
|||| | |||||||||||| |||| |||||||| |||||||||||||||||||||| ||
Sbjct 1740 GGATGTTAGAGAAGGCTTAACTGGGAACCTCTCAGCAACCTTGGAGCAACTCTATGCTTG 1799
Query 1770 GGAAAAGAAACTGTATAAAGAAGTCAAGGATGAAGAGAAGCTTCGTGTTGTCTATGAAGA 1829
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 GGAAAAGAAACTGTACAAAGAAGTCAAGGATGAAGAGAAGCTTCGTGTTGTCTATGAAGA 1859
Query 1830 AAAGTGCAGAACACTGAAAAAACTGGATAGTCTTGGTGCGGAATCTAGCAAGATTGATAC 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 AAAGTGCAGAACACTGAAAAAACTGGATAGTCTTGGTGCGGAATCTAGCAAGATTGATAC 1919
Query 1890 TACTCGAGCAGCCATTAGAAAGCTGCTAACCAAACTCGACGTCTGTATAAGATCTGTTGA 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 TACTCGAGCAGCCATTAGAAAGCTGCTAACCAAACTCGACGTCTGTATAAGATCTGTTGA 1979
Query 1950 TTCCATTTCCAGCAGGATACATAAACTGAGAGACGAAGAATTACAGCCGCAACTCACTCA 2009
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 1980 TTCCATTTCCAGCAGGATACATAAACTGAGAGACGAAGAATTACAGCCTCAACTAACACA 2039
Query 2010 ATTGATTCACGGGTTGATAAGAATGTGGAGATCAATGCTCAAGTGCCACCAGAAGCAGTT 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 ATTGATTCACGGGTTGATAAGAATGTGGAGATCAATGCTCAAGTGCCACCAGAAGCAGTT 2099
Query 2070 CCAGGCAATTATGGAGAGCAAGGTTCGATCTCTCAGGGCAAACACCGGCTTACAAAGAGA 2129
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2100 CCAGGCAATCATGGAGAGCAAGGTTCGATCTCTCAGGGCAAACACCGGCTTACAAAGAGA 2159
Query 2130 CTCTGGTCTGAAAGCTATTCTTGATCTGGAGATGGAGCTACGAGAATGGTGCATTAGCTT 2189
||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2160 CTCCGGTTTGAAAGCTATTCTTGATTTGGAGATGGAGCTACGAGAATGGTGCATTAGCTT 2219
Query 2190 CAACCATTGGGTCAATACTCAGAAATTATATGTGGAGTCTCTAAATGGATGGCTCTCAAG 2249
|||| | ||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 2220 CAACGACTGGGTCAATACTCAGAAATCATACGTGGAGTCTCTAAATGGATGGCTCTCAAG 2279
Query 2250 ATGTCTTCACTATGAACCTGAATCAACAGAGGATGGAATTGCCCCTTTCTCTCCTAGCCG 2309
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2280 ATGTCTTCACTATGAACCTGAATCAACGGAGGACGGAATTGCCCCTTTCTCTCCTAGCCG 2339
Query 2310 TGTTGGAGCTCCACAGGTTTTCGTTATATGCAAAGATTGGCAAGAAGCAATGGCGAGAAT 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 TGTTGGAGCTCCACAGGTTTTCGTTATATGCAAAGATTGGCAAGAAGCAATGGCGAGAAT 2399
Query 2370 CTCTGGAGAGAACGTTTCAAACGCTATGCAAGGCTTTGCTTCGAGCCTACATGATTTATG 2429
|||||||||||||||||||||||| |||||||||||||| ||||| || ||||| ||||
Sbjct 2400 CTCTGGAGAGAACGTTTCAAACGCAATGCAAGGCTTTGCCTCGAGTCTGCATGAACTATG 2459
Query 2430 GGAGAGACAAGATGAGGAGCAAAGACAGAGAGTGAAAGCAGAGTATGTCTCACATGATTT 2489
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 2460 GGAGAGACAAGATGAGGAGCAAAGGCAGAGAGTGAAAGCAGAGTATGTGTCACACGATTT 2519
Query 2490 TGAGAAACGGTTGAATGATCTTCGGATGGAGAGGGCGAGAGTGAGAATGAGAAACGATCA 2549
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2520 CGAGAAACGGTTGAATGATCTTCGGATGGAGAGGGCGAGAGTGAGAATGAGAAACGATCA 2579
Query 2550 GCTACAAGACGGTGCATCAGAGAAAAGCGTGGTCTTGTCTGAGAGCGGGATATCGGCGTT 2609
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2580 GCTACAAGACGGTGCATCAGAGAAAAGCGTGGTCTTGTCCGAGAGCGGGATCTCGGCGTT 2639
Query 2610 GGATGATTTGAAGGTGGATTTAGATTCTATGAGGAAGAAGCTAGAAGAAGAGAGAGCAAG 2669
|||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||
Sbjct 2640 GGATGATTTGAAAGTGGACTTGGATTCAATGAGGAAGAAGCTAGAAGAAGAAAGAGCAAG 2699
Query 2670 ACACAAGGAAACAATTAAACTTGTGAACAATGCAGCTTCGAGCAGCTTACAAGCTGGTTT 2729
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2700 ACACAAGGAAACAATTAAACTTGTGAACAATGCAGCTTCAAGCAGCTTACAAGCTGGTTT 2759
Query 2730 AGTACCAATCTTTGAGGCCTTGGGGAATTTCACTTCACAAGTTGTGAAAGCTCATGAAGA 2789
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2760 AGTACCAATCTTTGAGGCTTTGGGGAATTTCACTTCACAAGTTGTGAAAGCTCATGAAGA 2819
Query 2790 TGTTAGGTTTCAACAACAACA---GCCTCAGTCTGAAGATTGA 2829
||||||||||||||||||||| |||| ||||||||||||||
Sbjct 2820 TGTTAGGTTTCAACAACAACAACAGCCTGAGTCTGAAGATTGA 2862
> AT1G77500.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr1:29121489-29125191 FORWARD LENGTH=3158
Length=3158
Score = 82.4 bits (44), Expect = 2e-14
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 814 CCTCCGTCTCCGCCTAAGATCTCAAGTTGGGATTTTTTGAATGTGTTTGATACTTATGAT 873
|||||||| || |||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct 1009 CCTCCGTCACCACCTACGGTTTCAACTTGGGATTTTTTGAATGTGTTTGATACTTATGAT 1068
Query 874 TA 875
||
Sbjct 1069 TA 1070
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140567774286
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5