BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472428
Length=1456
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21920.1 | Symbols: | Histone H3 K4-specific methyltransfer... 2161 0.0
AT1G77660.1 | Symbols: | Histone H3 K4-specific methyltransfer... 797 0.0
> AT1G21920.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr1:7704255-7706140 REVERSE LENGTH=1727
Length=1727
Score = 2161 bits (1170), Expect = 0.0
Identities = 1370/1463 (94%), Gaps = 27/1463 (2%)
Strand=Plus/Plus
Query 1 AAGAAATGGAAAAACAGGCGAAGCTAACGAGGACACAGTCGTCGTTGCTCCGGTCATCGT 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 270 AAGAAATGGAAAAACAGGCGAAGCTAACGAGGACACAGTCGTCGTTACTCCGGTCATCGT 329
Query 61 CGAATCTTCGTTCGTCATTTCAAAGCTTATCTTCAATCGTCGAAGGCGAACAAGATCTAG 120
||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 330 CGAATCTCCGTTCGTCATATCAAAGCTTATCTTCAATCGTCGAAGGCGAGCAAGATCTAG 389
Query 121 AAGCCGgagagaaagaagagaaacagagaagaaaaCCACCTAAACCATTCGGTTCATCAA 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 390 AAGCCGGAGAGAAAGAAGAGAAACAGAGAAGAAAACCACCTAAACCATTCGGTTCACCAA 449
Query 181 GTCCTAAATCCGGTTTAACTC-GGATTAACCCCGGTTTAGCATTCACAATGGTgtctctc 239
||||||| |||||||||| | | || || ||||||||||| ||||||||||| ||||||
Sbjct 450 ATCCTAAAACCGGTTTAAC-CAGAATCAATCCCGGTTTAGCTTTCACAATGGTATCTCTC 508
Query 240 tctttcctcagtctctcatcgttcttcttcttcgtcgtcttctcACAAACCGATGAGATT 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 TCTTTCCTAAGTCTCTCATCGTTCTTCTTCTTCGTCGTCTTCTCACAAACCGATGAGATT 568
Query 300 CTCACATCGGAAAATCTTTTACTAGCTTTAATCTTCGTCGCCGTAGCTCTCTTCTTCGCC 359
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 569 CTCACATCGGAGAATCTTTTACTAGCTTTAATCTTCGTCGCTGTAGCTCTCTTCTTCGCT 628
Query 360 TCCAAGAACATCGCTCTTCTTAACCAAACCGTAATCGCAATCAAAAACTTCGGGTTTCAA 419
|||||||||||| |||| || ||||||||||||||||||||||||||||| ||||| |||
Sbjct 629 TCCAAGAACATCTCTCTACTAAACCAAACCGTAATCGCAATCAAAAACTTAGGGTTCCAA 688
Query 420 AGCAGAAACTCAAAATCAAAACCGGTACAATGGTACATCGGAGACGATACTAAACCGGAG 479
| |||| |||| |||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 689 AACAGAGACTCGAAATCAAAACCGGTACAATGGTACATCGGAGACGATTCAAAACCGGAG 748
Query 480 AAGAAGATCATAAAGCGGTTCGTTAAAGAAGGAGTTCAATTCTACAGTAATGGAGATTTC 539
|||||| | || ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 749 AAGAAGGTAATCAAGAGATTCGTTAAAGAAGGAGTTCAATTCTACAGTAATGGAGATTTC 808
Query 540 TACGAAGGTGAATTTCACAAAGGGAAGTGTAACGGAAGTGGAGTTTATTACTATTTCGTG 599
||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||
Sbjct 809 TACGAAGGTGAATTTAACAAAGGGAAGTGTAACGGAAGTGGTGTGTATTACTATTTCGTG 868
Query 600 AGAGGAAGATATGAAGGAGATTGGATAGATGGGAGATATGATGGTCATGGGATTGAGAGT 659
|||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 869 AGAGGACGTTATGAAGGAGATTGGCTAGATGGGAGATATGATGGTCATGGGATTGAGAGT 928
Query 660 TGGGCTAGAGGAAGTAGATATAAAGGTCAATATAGGCAAGGTCTTAGACATGGTTATGGA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 929 TGGGCTAGAGGAAGTAGATATAAAGGTCAATATAGGCAAGGTCTTAGACATGGTTTTGGT 988
Query 720 GTTTATAGATTCTACACTGGTGATTGTTATGCTGGTGAATGGTTTAATGGTCAAAGCCAT 779
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 989 GTTTATAGATTCTACACTGGTGATTGTTATGCTGGTGAGTGGTTTAATGGTCAAAGCCAT 1048
Query 780 GGTTTTGGTGTTCAATCTTGTGCTGATGGTAGCTCTTATGTTGGTGAGTCTAGATTTGGT 839
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 1049 GGTTTTGGTGTTCAATCTTGTTCTGATGGTAGCTCTTACCTTGGTGAGTCTAGATTTGGT 1108
Query 840 GTTAAACATGGTCTTGGTTCTTACCATTTCAGAAATGGAGATAAGTATGCAGGAGAGTAT 899
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 GTTAAGCATGGTCTTGGTTCTTACCATTTCAGAAATGGAGATAAGTATGCAGGAGAGTAC 1168
Query 900 TTTGGAGACAAGATTCATGGGTTTGGTGTGTATCGATTTGCTAATGGTCATTGTTATGAA 959
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1169 TTTGGAGACAAGATTCATGGGTTTGGTGTGTATCGATTTGCTAATGGACACTGTTATGAA 1228
Query 960 GGAGCATGGCATGAAGGTCGTAAGCAAGGGTTTGGTGCTTACTCGTTTAGAACTGGTGAT 1019
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1229 GGAGCATGGCATGAAGGTCGTAAGCAAGGGTTTGGTGCTTACTCGTTTAGAAATGGTGAT 1288
Query 1020 GCTAAATCTGGTGAATGGGATTCAGGGAAGCTTGTAACTTCTCTTCCTCTTACGAGTGAG 1079
||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1289 GCTAAATCTGGTGAATGGGATTCAGGGGTTCTTGTGACTTCACTTCCTCTTACGAGTGAG 1348
Query 1080 CCAGTTTCAAGAGCGGTTCAGGCGGCTCGAGAAACAGCGAACAAGGCAGTGAATCGGAGA 1139
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1349 CCAGTTTCAAGAGCTGTTCAGGCGGCTCGAGAAACAGCGAATAAGGCAGTGAATCGGAGA 1408
Query 1140 CGAGTAGATGAGCAGGTGAGCCGAGCCGTGGCTGCAGCTAATAAGGCTGCTACGGCTGCA 1199
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1409 CGAGTAGATGAGCAGGTGAGCCGAGCTGTGGCTGCAGCTAATAAGGCTGCTACGGCTGCA 1468
Query 1200 AGAGTGGCTGCTGTGAGAGCTGTTCAGAATCAAATGGATGGTAAATTTTGTCAAAGTTGa 1259
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1469 AGAGTGGCTGCTGTGAGAGCCGTTCAGAATCAAATGGATGGTAAATTTTGTCAAAGTTGA 1528
Query 1260 aaaaa--aaaaTTGTAAAAA-TCtttttttttACCGGTCTTCTCTGTAACCCTGATTGAG 1316
||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct 1529 AAAAAGGAAAAT-GTAAAAAATCTTTTTTTTTACCGGT-TTCTCTGTAACCCTGAATC-G 1585
Query 1317 CTaaaaaaaaTGGTAGCTTGTTTCAGAGGTTTGTGGCAGAGAGT-AATTTTCTATCTTTT 1375
||| | | ||||||||||||||||| |||||||| ||||||| |||||||
Sbjct 1586 --AAA------G-T---TTGTTTCAGAGGTTTGTAACAGAGAGTTAATTTTCGATCTTTT 1633
Query 1376 TACTAATGTAACAAA-CTGTAAATAGTTGAAGAAGCTGGTGTTTTTACTTTTGTTGTAAA 1434
||||||||||||||| ||||||||||||||||||| | | || || ||| ||||||||
Sbjct 1634 TACTAATGTAACAAAACTGTAAATAGTTGAAGAAGAAGCT-TTGTT--TTT-GTTGTAAA 1689
Query 1435 -TCAACGGCTTGAAATGGAGCTT 1456
||||||||||||||||||||||
Sbjct 1690 ATCAACGGCTTGAAATGGAGCTT 1712
> AT1G77660.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr1:29185899-29187825 REVERSE
LENGTH=1765
Length=1765
Score = 797 bits (431), Expect = 0.0
Identities = 881/1088 (81%), Gaps = 72/1088 (7%)
Strand=Plus/Plus
Query 197 AACTCGGATTAACCCCGGTTTAGCATTCACAAT-GGTgtctctctctttcctcagtctct 255
||| || ||||| || ||| | ||||||||| | | | | |||||||||||| |||||||
Sbjct 533 AAC-CGAATTAAACCGGGTCTCGCATTCACACTCGCT-TGTCTCTCTTTCCTGAGTCTCT 590
Query 256 catcgttcttcttcttcgtcgtcttctcACAAACCGATGAGATTCTCACATCGGAAAATC 315
|||| | ||| | | | | | |||| | ||||||||| |||| ||||| ||||
Sbjct 591 CATC--T-TTC-T-TAC-T-G--TTCT-TC--GTTGATGAGATTTTCACGTCGGAGAATC 638
Query 316 TTTTACTAGCTTTAATCTTCGTCGC-CGTAGCTCTCTTCTTCGCCTCCAAG-AACATCGC 373
| ||||||| ||| || |||||||| | | ||||| |||||||| | | || ||||| ||
Sbjct 639 TCTTACTAGGTTTGATTTTCGTCGCTC-TTGCTCTGTTCTTCGCGT-CGAGAAACATGGC 696
Query 374 TCTTCTTAACCAAACCGTAATCGCAATCAA--A-A-AC-T-TCGGGTTTCAAAGCAGAAA 427
|| ||||||||||||||||||||||||| | | | | | ||| || || | |||
Sbjct 697 GGTTATTAACCAAACCGTAATCGCAATCAAGCAGATTCGTGTAAGGTCTCGAATC--AAA 754
Query 428 CTCAAAATCAAAACCGGTACAATGGTACATCGGAGA--CGATA-CTAAACCGGA--GAAG 482
| | ||| | |||||||| ||||||||||||||||| | | | | |||| || |||
Sbjct 755 CAC-AAACCGAAACCGGTTCAATGGTACATCGGAGATTCAAAACCGGAACC-GATCAAAG 812
Query 483 AAGATCATA-AAG-CGGT-TCGTTAAAGAAGGAGTTCAATTCTACAGTAATGGAGATTTC 539
|||| | | ||| | | |||||||||||||||||||||||| || ||||||||||||
Sbjct 813 AAGAAGAAACAAGAC-TTGTCGTTAAAGAAGGAGTTCAATTCTTTAGCAATGGAGATTTC 871
Query 540 TACGAAGGTGAATTTC-ACAAAGGGAAGTGTAACGGAAGTGGAGTTTATTACTATTTCGT 598
|||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct 872 TACGAAGGTGAA-TTCAACAGAGGGAAGTGTAACGGAAGTGGAGTTTATTATTATTACGT 930
Query 599 GAGA-GGAAGATATGAAGGAGATTGGAT-AGATGGGAGATATGATGGTCATGGGATTGAG 656
| | ||||||||||||||||||||||| | |||| || || |||||| |||| || |||
Sbjct 931 TA-ATGGAAGATATGAAGGAGATTGGATCA-ATGGAAGGTACGATGGTTATGGAATCGAG 988
Query 657 AGTTGGGCTAGAGGAAGTAGATATAAAGGTCAATATAGGCAAGGTCTTAGACATGGTTAT 716
||||| ||| |||||||| ||||||||| || |||| |||||| ||||||||||||| |
Sbjct 989 TGTTGGTCTAAAGGAAGTAAATATAAAGGACAGTATAAGCAAGGACTTAGACATGGTTTT 1048
Query 717 GGAGTTTA-TAGATTCTACACTGGTGATTGTTA-TGCTGGTGAATGGTTTAATGGTCAAA 774
|||||||| | | || ||||| || |||| ||| | |||||||||||||||| |||||||
Sbjct 1049 GGAGTTTACT-GGTTTTACACCGGAGATTCTTACT-CTGGTGAATGGTTTAACGGTCAAA 1106
Query 775 GCCATGGTTTTGGTGTTCAATCTTGTGCTGATGGTAGCTCTTATGTTGGTG-AGTCTAGA 833
||||||| ||||| |||||| ||||||||||||| ||||||| ||| || | | || | |
Sbjct 1107 GCCATGGCTTTGGAGTTCAAACTTGTGCTGATGGAAGCTCTTTTGTCGGAGAATTC-AAA 1165
Query 834 TTTGGTGTTAAACATGGTCTTGGTTCTTACCATTTCAGAAATGGAGATAAGTATGCAGGA 893
|||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1166 TTTGGTGTCAAACATGGACTTGGTTCTTACCATTTCAGGAATGGAGATAAGTATGCAGGA 1225
Query 894 GAGTATTTTGGAGACAAGATTCATGGGTTTGGTGTGTATCGATTT-GCTAATGGTCATTG 952
|||||||||||||||||||||||||| |||||||| || | |||| ||||||||||| |
Sbjct 1226 GAGTATTTTGGAGACAAGATTCATGGATTTGGTGTTTACC-ATTTCGCTAATGGTCACTA 1284
Query 953 TTATGAAGGAGCATGGCATGAAGGTCGTAAGCAAGGGTTTGGTGCTTACTCG-TTTAGAA 1011
||| |||||||| ||||||||||||||||| ||||| | ||| | || | | |||||||
Sbjct 1285 TTACGAAGGAGCTTGGCATGAAGGTCGTAAACAAGGCTATGGCACGTA-TAGATTTAGAA 1343
Query 1012 CTGGTGATG-CTAAATCTGGTGAATGGGATTCAGGG-AAGCTTGT-AACTTCTCTTCCTC 1068
| |||||| | ||||| |||||||||||| | || || || || ||| |||||||
Sbjct 1344 CCGGTGATATC-AAATCCGGTGAATGGGATG-ATGGTAATCTCGTTAACCA-TCTTCCT- 1399
Query 1069 TTACGAGT--GAGCCAGTTTCA-AGAGCGGTTCAG-GCGGCTCGAGAAACAGCGAACAA- 1123
||| || | || || ||| | || ||||||||| | | | ||||||| ||| || ||
Sbjct 1400 TTA-GACTCTGACCCGGTT-CGTAGGGCGGTTCAGAGTG-CACGAGAAAGAGCAAAGAAT 1456
Query 1124 GGCAGTGAATCGGAGACG-AGTAGATGAGCAGGTGAGCCGAGCCGTGGCTGCAGCTAATA 1182
|| |||||||| |||||| | | ||||||||||||| ||||| ||||||||||||||||
Sbjct 1457 GG-AGTGAATCAGAGACGGA-TCGATGAGCAGGTGATACGAGCTGTGGCTGCAGCTAATA 1514
Query 1183 AGGCTGCTACGGCTGCAAGAGTGGCTGCTGTGAGAGCTGTTCAGAATCAAATGGATGGTA 1242
| ||||| |||||||| ||||| || ||||||| ||| ||||| ||||||||||||||||
Sbjct 1515 AAGCTGCGACGGCTGCTAGAGTTGCAGCTGTGAAAGCAGTTCAAAATCAAATGGATGGTA 1574
Query 1243 AATTTTGT 1250
|| |||||
Sbjct 1575 AAATTTGT 1582
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71786779350
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5