BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472484
Length=1291
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22440.1 | Symbols: | Zinc-binding alcohol dehydrogenase fa... 1790 0.0
AT4G22110.1 | Symbols: | GroES-like zinc-binding dehydrogenase... 1051 0.0
> AT1G22440.1 | Symbols: | Zinc-binding alcohol dehydrogenase
family protein | chr1:7922428-7924944 FORWARD LENGTH=1478
Length=1478
Score = 1790 bits (969), Expect = 0.0
Identities = 1176/1275 (92%), Gaps = 18/1275 (1%)
Strand=Plus/Plus
Query 1 AAAAATAAGCTATTGATAAAAACAAGAGAATCTTTTTGCAGAGATAATATAACAAGAACA 60
|||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 26 AAAAATGAGCTATTGACAAAAACAAGAGAATCTTTTTGGGGAGATAATATAAGAAGAGCA 85
Query 61 AGTG------ACTCTCTCTC-C-CAGATCACTCCATCATTGTTCACCATGGACAAAGCTT 112
|||| |||||||||| | |||||| ||||||||||||||||||||||||| ||||
Sbjct 86 AGTGACTCTCACTCTCTCTCTCTCAGATCCCTCCATCATTGTTCACCATGGACAAGGCTT 145
Query 113 CACTCTCCAGCACCGAAGGAAAGCCGATTCGATGCAAAGCAGCAATCTTACGGAAAGCAG 172
|| | ||| |||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 146 CA------ATCACTGAAGGAAAGCCGATTCGATGCAAAGCAGCAATCTTAAGAAAAGCAG 199
Query 173 GAGAAGCTTTGGTGATAGAAGAGATCCAAGTTGATCCACCTCAAGCTTACGAAGTTAGGA 232
||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 200 GAGAACCATTGGTGATAGAAGAGATCCAAGTTGATCCACCTCAAGCTTACGAAGTCAGAA 259
Query 233 TTAAAATTCTATGTACTTCTCTATGTCACACGGATGTTACTTTCTGGAAACTAGAAAGTG 292
| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 260 TCAAAATTTTATGCACTTCTCTATGTCACACGGATGTTACTTTCTGGAAACTAGACAGTG 319
Query 293 GACCGCTTGCAAGGTTTCCTAGGATCCTAGGTCACGAAGCAGTCGGTGTGGTCGAGAGTA 352
||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 320 GACCGCTTGCAAGATTTCCTAGGATTCTAGGTCATGAAGCAGTCGGTGTGGTCGAGAGTA 379
Query 353 TTGGAGCCAACGTAGACGGATTTAAACAAGGCGACGTCGTTTTGCCAGTGTTTCAACCTC 412
|||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 380 TTGGAGAAAAGGTAGACGGATTTAAACAAGGCGACGTCGTTTTGCCAGTGTTTCATCCTC 439
Query 413 AATGTGAAGAATGCAAAGAATGCAAATCTCCAAAGAGCAACTGGTGCACAAGATATACTA 472
||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |
Sbjct 440 AATGTGAAGAATGCAAAGAGTGCATATCTCCAAAGAGCAACTGGTGCACAAAATATACAA 499
Query 473 ACGATT-TCTTATCAAACACTAGACGATATGGAATGACTTCAAGATTCAAGGACTCTTTT 531
|||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 500 ACGATTAT-TTATCAAACACAAGACGATATGGAATGACTTCAAGATTCAAGGACTCTCGT 558
Query 532 GGAGAAGTTATTCACCATTTTATCTTTGTCTCGAGTTTTACTGAATATACCGTGGTAGAT 591
||||||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 559 GGAGAAGATATTCACCATTTCATCTTTGTCTCAAGTTTTACTGAATATACCGTTGTAGAT 618
Query 592 ATCGCACATCTCGTCAAAATCTCTCCTGAAATTCCCGTTGATATAGCAGCCTTGCTCAGC 651
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 619 ATCGCACATCTCGTCAAAATATCTCCTGAAATTCCCGTTGATATAGCGGCCTTGCTCAGC 678
Query 652 TGCGGTGTTGCCACAGGAATTGGAGCTGCGTGGAAAGTGGCTGACGTAGAGGAAGGTTCC 711
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 679 TGCAGTGTTGCCACAGGACTTGGAGCTGCGTGGAAAGTGGCTGACGTAGAGGAAGGTTCC 738
Query 712 ACTGTCGCTATCTTTGGCCTTGGTGCTGTTGGACTCGCGGTTGCAGAAGGAGTCAGATTG 771
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 739 ACTGTCGTTATCTTTGGCCTTGGTGCTGTTGGACTAGCGGTTGCAGAAGGAGTCAGATTG 798
Query 772 CGGGGAGCCACTAAGATCATCGGTGTGGATCTCAATCCCGCCAAATTTGAAATAGGTAAA 831
|| |||||| | || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 799 CGTGGAGCCGCAAAAATCATCGGTGTGGATCTCAATCCCGCGAAATTTGAAATAGGTAAA 858
Query 832 AGATACGGAATGACGGATTTCGTCAATCCTGCTTTGTGTGGGGAGAAGACAATTAGTGAG 891
|||| ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 859 AGATTTGGAATCACAGATTTTGTCAATCCTGCTTTGTGTGGGGAGAAGACAATTAGCGAG 918
Query 892 GTGATTAGAGAAATGACAGAAGTAGGAGCTGACTACAGTTTTGAATGCATTGGTTTAGCT 951
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 919 GTGATTAGAGAAATGACAGATGTAGGAGCTGACTACAGTTTTGAATGCATTGGTTTAGCT 978
Query 952 TCCTTGATGGAAGAGGCTTTCAATAGCACTCGCCCTGGATCGGGTAAAACGGTAATATTG 1011
||||||||||||||||| ||||| || |||||||| ||||||||||||||| || |||||
Sbjct 979 TCCTTGATGGAAGAGGCATTCAAGAGTACTCGCCCGGGATCGGGTAAAACGATAGTATTG 1038
Query 1012 GGGATGGAACAAAAGGCTATGCCAGTAAGCTTGGGTAGTTATGATCTTCTCAGAGGCAGA 1071
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1039 GGGATGGAACAAAAGGCTTTGCCAATAAGCTTGGGTAGTTATGATCTTCTCAGAGGCAGA 1098
Query 1072 ACTATATGTGGAACATTGTTCGGTGGTTTGAAACCCAAACTTGATATTCCAATTCTCGTG 1131
||| |||| || || || || || |||||||||||||||||||||||||| |||||||||
Sbjct 1099 ACTGTATGCGGCACTTTATTTGGCGGTTTGAAACCCAAACTTGATATTCCTATTCTCGTG 1158
Query 1132 GATCGTTATTTGAAAAAGGAGCTTAACCTAGACGG-TCTGATTACACATGAATTAAGCTT 1190
|||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||
Sbjct 1159 GATCGTTATTTGAAAAAGGAGCTTAATCTAGA-GGATCTGATTACACACGAATTAAGCTT 1217
Query 1191 TGAGGAAATTAACAAAGCTTTTGATTTATTGGCGGAAGGAAACTCTATCCGTTGCGTTGT 1250
||| ||||||||||||||||| |||||||||| || |||||||||||||||||| || |
Sbjct 1218 TGAAGAAATTAACAAAGCTTTCCATTTATTGGCTGAGGGAAACTCTATCCGTTGCATTAT 1277
Query 1251 ATGGATGGATAAATA 1265
|||||||||||||||
Sbjct 1278 ATGGATGGATAAATA 1292
> AT4G22110.1 | Symbols: | GroES-like zinc-binding dehydrogenase
family protein | chr4:11711336-11714228 REVERSE LENGTH=1391
Length=1391
Score = 1051 bits (569), Expect = 0.0
Identities = 987/1185 (83%), Gaps = 43/1185 (4%)
Strand=Plus/Plus
Query 96 CACCATGGACAAAGCTTC-A--CTCTCCA-GCACCGAAGGAAAGCCGATTCGATGCAAAG 151
||||||||| ||| | || | |||||| || ||||||||||||||||||||||||||
Sbjct 132 CACCATGGAGAAAACATCAATGTTCTCCATTCA-CGAAGGAAAGCCGATTCGATGCAAAG 190
Query 152 CAGCA--ATCTTACGGAAAGCAGGAGAAGCTTTGGTGATAGAAGAGATCCAAGTTGATCC 209
||||| |||| | | ||| |||||||||| |||||||||||||||||||| || |||||
Sbjct 191 CAGCAGTATCT-A-GAAAACCAGGAGAAGCATTGGTGATAGAAGAGATCCATGTGGATCC 248
Query 210 ACCTCAAGCTTACGAAGTTAGGATTAAA-ATTC-TATGTACTTCTCTATGTCACACGGAT 267
|||||||||||| ||||||||||| ||| || | ||||||| ||| ||||||| || |||
Sbjct 249 ACCTCAAGCTTATGAAGTTAGGAT-AAAGAT-CATATGTACATCTTTATGTCATACCGAT 306
Query 268 GTTACTTTCTGGAAACTAGAAAGTGGACCGCTTGCAAGGTTTCCTAGGATCCTAGGTCAC 327
||| |||||| |||| |||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct 307 GTTTCTTTCTCGAAAATAGACAGTGGACCGCTTGCAAGGTTTCCTAGGATTCTAGGACAC 366
Query 328 GAAGCAGTCGGTGTGGTCGAGAGTATTGGAGC-CAACGTAGAC-GGATTTAAACAAGGCG 385
||||||||||||||| ||||||| ||||| | || || || |||||| ||||||| |
Sbjct 367 GAAGCAGTCGGTGTGATCGAGAGCATTGGTGAACAT-GT-GAATGGATTTCAACAAGGTG 424
Query 386 ACGTCGTTTTGCCAGTGTTTCAACCTCAATGTGAAGAATGCAAAGAATGCAAATC-TCCA 444
|||||||||||||||||||||| ||||| ||||||||||| | ||| |||||||| || |
Sbjct 425 ACGTCGTTTTGCCAGTGTTTCACCCTCACTGTGAAGAATGTAGAGATTGCAAATCCTC-A 483
Query 445 AAGAGCAACTGGTGCACAAGATATACTAACGATTTCTTATCAAACACTAGACGATATGGA 504
||||||||||||||| |||||| | | ||||||||||||||||||| ||||||||||||
Sbjct 484 AAGAGCAACTGGTGCGCAAGATTTGCCGACGATTTCTTATCAAACACGAGACGATATGGA 543
Query 505 ATGACTTCAAGATTCAAGGACTCTTTTGGAGAAGTTATTCACCATTTTATCTTTGTCTCG 564
||||||||| ||||||| ||||| |||||||||| |||| |||||||| |||||||||||
Sbjct 544 ATGACTTCACGATTCAAAGACTCCTTTGGAGAAGATATTTACCATTTTCTCTTTGTCTCG 603
Query 565 AGTTTTACTGAATATACCGTGGTAGATATCGCACATCTCGTCAAAATCTCTCCTGAAATT 624
|||||| |||||||||| || || || ||||||||||| ||||||||||||||||| |||
Sbjct 604 AGTTTTTCTGAATATACGGTCGTCGACATCGCACATCTTGTCAAAATCTCTCCTGATATT 663
Query 625 CCCGTTGATATAGCAGCCTTGCTCAGCTGCGGTGTTGCCACAGGAATTGGAGCTGCGTGG 684
|| ||||||| |||||| ||||| |||||||||||| |||||||||||||||| || |||
Sbjct 664 CCGGTTGATAAAGCAGCATTGCTTAGCTGCGGTGTTTCCACAGGAATTGGAGCAGCTTGG 723
Query 685 AAAGTGGCTGACGTAGAGGAAGGTTCCACTGTCGCTA-TCTTTGGCCTTGGTGCTGTTGG 743
||||||||| |||| || |||| ||||| || || | | ||||||||||||||||||||
Sbjct 724 AAAGTGGCTAACGTGGAAAAAGGCTCCACCGTTGC-AGTTTTTGGCCTTGGTGCTGTTGG 782
Query 744 ACTCGCGGTTGCAGAAGGAGTCAGATTGCGGGGAGCCA-CTAAGATCATCGGTGTGGATC 802
||| ||||||| |||||||| ||| |||| |||||| | |||||||| ||||| ||||
Sbjct 783 ACTTGCGGTTGGAGAAGGAGCCAGGCTGCGTGGAGCCGGC-AAGATCATTGGTGTTGATC 841
Query 803 TCAATCCCGCCAAATTTGAAATAGGTAA-AAGATACGGAATGACGGATTTCGTCAATCCT 861
||||||| | ||||| || |||| || || || || | ||||||||| ||||| ||
Sbjct 842 TCAATCCAGAAAAATTCGAGCTAGGCAAGAA-ATTTGGTTTCACGGATTTCATCAATTCT 900
Query 862 GCTTTGTGTGGGGAGAAGACA-ATTAGTGAGGTGATTAGAGAAATGACAGAAGTAGGAGC 920
| |||||||| || || | | ||||| |||||||||| ||||||||| | || |||||
Sbjct 901 ACCTTGTGTGGAGAAAATA-AGATTAGCGAGGTGATTAAAGAAATGACTGGAGGAGGAGT 959
Query 921 TGACTACAGTTTTGAATGCATTGGTTTAGCTTCCTTGATGGAA-GAGGCTTTCAATAGCA 979
|||||| ||||| |||||| |||||||| |||| || || || || |||||| ||||
Sbjct 960 TGACTATAGTTTCGAATGCGTTGGTTTACCTTCTTT-ATTGACCGAAGCTTTCTCCAGCA 1018
Query 980 CTCGCCCTGGATCGGGTAAAACGGTAATATTGGGGATGGAACAAA-AGGCTAT-GCCAGT 1037
||||| | || || || ||||||||| | |||||||| || || | ||| ||||||
Sbjct 1019 CTCGCACGGGTTCAGGAAAAACGGTAGTGTTGGGGATAGAT-AAGCAT-CTAACGCCAGT 1076
Query 1038 AAGCTTGGGTAG-TTATGATCTTCTCAGAGGCAGA-ACTATATGTGGAA-CATTGTTCGG 1094
||| |||||||| || ||||||||||||||||||| | | | ||||||| | ||||| ||
Sbjct 1077 AAGTTTGGGTAGCTT-TGATCTTCTCAGAGGCAGACA-TGTTTGTGGAAGC-TTGTTTGG 1133
Query 1095 TGGT-TTGAAACCCAAACTTGATATTCCAATTCTCGTGGATCGTTATTTGAAAAAGGAGC 1153
|||| || ||||||||||| |||||||| ||||| || |||| ||| || ||||||||||
Sbjct 1134 TGGTCTT-AAACCCAAACTAGATATTCCGATTCTGGTTGATCATTACTTAAAAAAGGAGC 1192
Query 1154 TTAACCTAGACGGTCTGATTACACATGAATT-AAGCTTTGAGGAAATTAACAAAGCTTTT 1212
|||| | || || | |||||||||||||| || ||||||||||| |||||||||||
Sbjct 1193 TTAATTTGGATAGTTTTATTACACATGAATTGAAA-TTTGAGGAAATCAACAAAGCTTTC 1251
Query 1213 GATTTATTGGCGGAAGGAAACTCTATCCGTTGCGTTGTATGGATG 1257
|||||||| | | ||||||| ||| |||| ||| || | ||||||
Sbjct 1252 GATTTATTAGTGCAAGGAAAGTCTCTCCGCTGCATTCTTTGGATG 1296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63503689425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5