BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472494 Length=1917 Score E Sequences producing significant alignments: (Bits) Value AT1G22540.1 | Symbols: | Major facilitator superfamily protein... 2791 0.0 > AT1G22540.1 | Symbols: | Major facilitator superfamily protein | chr1:7964042-7966436 FORWARD LENGTH=2048 Length=2048 Score = 2791 bits (1511), Expect = 0.0 Identities = 1791/1920 (93%), Gaps = 44/1920 (2%) Strand=Plus/Plus Query 1 AAATGTTCCACACTGATGCGAGT---AACACC-AACCATCTTCT-TGTTTTGtttttttA 55 |||||||||||| |||||||||| |||||| || |||| ||| | ||||||||| || Sbjct 4 AAATGTTCCACAGTGATGCGAGTAACAACACCAAAGCATC-TCTAT-TTTTGTTTTCTTC 61 Query 56 AGTGTCAAAATCAAAAGaa-aaa--aaaaaT-G---G-TTGATTGATACAAAAGACTTCT 107 | | || | | ||||| || ||| ||| | | | |||||||||||||||||||||| Sbjct 62 A-T-TC-ACACCAAAACAAGAAATCAAATTTGGTTTGATTGATTGATACAAAAGACTTCT 118 Query 108 TTA-AGA--TA-----T--TTTGGAGAAATCGATTAAC-CATAATGGCGATCTCCGGCGC 156 | | | | || | ||||||||| |||||||| | |||| ||||||||||||| Sbjct 119 TCAGATATTTACTTCTTCATTTGGAGAAGCCGATTAACTGA-AATGTCGATCTCCGGCGC 177 Query 157 TGTTGATGAAGCCGGAACTCCACTTCTCGCTGTAACCGTCGACGGATCCGTCGACTACA- 215 |||||||||||| || |||||||||||||| | || | | |||||||||||| Sbjct 178 TGTTGATGAAGCTGGGACTCCACTTCTCGC--T----GT---C--A-CCGTCGACTACAG 225 Query 216 GAAGCAAACCCGCCGTTAGATCTTCCTCCGGTGGCTGGAGATCCGCCGGATTCATCATCG 275 ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 226 GAA-CAAACCCGCCGTCAAATCTTCCTCCGGTGGCTGGAGATCCGCCGGATTCATCATCG 284 Query 276 GTGTGGAGGTGGCTGAGCGATTCGCTTACTACGGGATATCGTCGAATCTGATTACGTATT 335 |||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct 285 GTGTGGAGGTTGCTGAGCGATTTGCTTACTATGGGATATCGTCGAATCTGATAACGTATT 344 Query 336 TGACGGGACCACTAGGACAATCGACGGCGGCTGCGGCGGCTAACGTCAACGCTTGGTCTG 395 |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 345 TGACCGGACCACTGGGACAATCGACGGCGGCTGCGGCGGCTAACGTGAACGCTTGGTCTG 404 Query 396 GAACGGCGTCGTTGCTTCCTCTCCTTGGTGCTTTTGTCGCTGACTCGTTTCTTGGTCGTT 455 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 405 GAACGGCGTCGTTGCTTCCTCTCCTTGGTGCTTTTGTCGCTGACTCGTTTCTAGGTCGTT 464 Query 456 TCCGTACAATCCTCGCCGCCTCTGCTCTCTATATATTGGGGCTTGGTTTATTGACGTTAT 515 |||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||| |||| Sbjct 465 TCCGGACAATCCTCGCCGCCTCTGCTCTCTATATAGTGGGGCTGGGTGTATTGACTTTAT 524 Query 516 CTGCAATGATTCCTTTAGACTGCAAAGTTTCGAATCTACTCTTGTCATGCTCTCCTCGAT 575 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 525 CTGCAATGATTCCTTCAGACTGCAAAGTTTCGAATCTACTCTCGTCATGCTCTCCTCGAT 584 Query 576 TTCAAGTAATCACATTCTTTAGTGCCCTGTATCTAGTGGCGCTAGCTCAAGGCGGTCACA 635 |||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct 585 TTCAAGTAATTACATTCTTTAGTGCATTGTATCTAGTGGCTTTAGCTCAAGGTGGTCACA 644 Query 636 AGCCGTGTGTTCAGGCTTTTGGAGCGGATCAGTTTGATGAAAAGGAACCTGAAGAGTGCA 695 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 AGCCGTGTGTTCAGGCTTTTGGAGCGGATCAGTTTGATGAAAAGGAACCTGAAGAGTGCA 704 Query 696 AAGCAAAGACTTCTTTCTTTAATTGGTGGTATTTTGGTATGTGCTTTGGGACGTTAACAA 755 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 705 AAGCAAAGAGTTCTTTCTTTAATTGGTGGTATTTTGGTATGTGCTTTGGGACGTTAACAA 764 Query 756 CTCTATGGGTCTTGAATTACATCCAGGATAATCTAAGTTGGGCCTTAGGATTTGGTATTC 815 |||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||||| Sbjct 765 CTCTATGGGTGTTGAATTATATCCAAGATAATCTAAGTTGGGCGTTAGGCTTTGGTATTC 824 Query 816 CATGCATTGCTATGGTAGTTGCTTTGGTTGTTTTCTTGCTTGGAACCTGCACTTATCGGT 875 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 825 CATGCATTGCTATGGTAGTTGCTTTGGTTGTTCTCTTGCTTGGAACCTGCACTTATCGGT 884 Query 876 TCAGTATTCGAAGAGAAGATCGAAGTCCTTTTGTGAGGATTGGAAATGTTTATGTAGCGG 935 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 885 TCAGTATTCGAAGAGAAGATCAAAGTCCTTTTGTGAGGATTGGAAATGTTTATGTAGCGG 944 Query 936 CTGTAAAGAACTGGAGTGTGTCAGCTTCAGCTGTAGCTGCTGCAGAGGAGAGACTTGGTC 995 ||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct 945 CTGTAAAGAACTGGAGTGTTTCAGCTTTAGATGTAGCTGCTGCAGAGGAGAGACTTGGTC 1004 Query 996 TTGTGTCTCGCAATAGCTCACAGCAATTTAGTTTTCTCAACAAAGCTCTGGTCGCAAAGA 1055 |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1005 TTGTGTCTTGCAGTAGCTCTCAGCAATTTAGTTTTCTCAACAAAGCTCTGGTCGCAAAGA 1064 Query 1056 ATGGTTCTTGTAGTATAGATGAACTCGAAGAAGCAAAATCAGTACTTAGGTTAGCTCCGA 1115 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1065 ATGGTTCTTGTAGTATAGATGAACTTGAAGAAGCAAAATCAGTGCTTAGGTTAGCTCCGA 1124 Query 1116 TATGGTTAACTTGCTTGGTTTATGCGGTTGTGTTTGCGCAGTCTCCGACTTTCTTCACCA 1175 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1125 TATGGTTAACATGCTTGGTTTATGCGGTTGTGTTTGCGCAGTCTCCAACTTTCTTCACCA 1184 Query 1176 AACAAGGAGCCACGATGGAGAGATCAATCACACCTGGTTACAAAATCTCTCCAGCTACCC 1235 |||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 1185 AACAAGGAGCTACAATGGAGAGATCAATCACACCTGGTTACAAGATCTCTCCGGCTACCC 1244 Query 1236 TCCAGTCCTTCATCAGCCTCTCTATAGTCATCTTCATCCCCATCTACGACCGTGTACTCA 1295 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 1245 TCCAGTCCTTCATCAGCCTCTCTATAGTCATCTTCATCCCAATCTACGACCGTGTACTAA 1304 Query 1296 TCCCAGTTGCAAGGTCGTTTACACATAAACCAGGCGGAATCACAATGCTTCAGAGAATCG 1355 ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 TCCCAATTGCAAGATCATTTACACATAAACCAGGCGGAATCACAATGCTTCAGAGAATCG 1364 Query 1356 GCACAGGCATATTCCTCTCTTTCCTTGCTATGGTAATAGCCGCTCTAGTGGAGATGAAAA 1415 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1365 GCACAGGCATATTCCTCTCTTTCCTTGCTATGGTTGTAGCCGCTCTAGTGGAGATGAAAA 1424 Query 1416 GGCTTAAAACTGCTGCGGATTACGGACTCATCGATTTGCCAGACGCTACGGTTCCAATGA 1475 ||||||||||||||||||||||||| ||| | |||| || ||||||||||||||||||| Sbjct 1425 GGCTTAAAACTGCTGCGGATTACGGGCTCGTAGATTCACCTGACGCTACGGTTCCAATGA 1484 Query 1476 GTGTGTGGTGGTTAGTTCCTCAGTATGTTCTCTTTGGTATCACAGATGTTTTCGCAATGG 1535 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1485 GTGTGTGGTGGTTAGTTCCTCAGTATGTTCTCTTTGGTATCACGGATGTTTTCGCAATGG 1544 Query 1536 TGGGTCTTCAAGAGTTCTTCTATGACCAAGTCCCGAATGAGCTGAGGAGTGTGGGATTGG 1595 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1545 TGGGTCTTCAAGAGTTCTTCTATGACCAAGTCCCGAATGAGCTGAGGAGTGTGGGGTTGG 1604 Query 1596 CTCTGTACTTGAGCATATTCGGTATTGGCAACTTTCTCAGCAGTTTCATGATATCAATCA 1655 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1605 CTCTGTACTTGAGCATATTCGGTATTGGTAACTTTCTCAGCAGTTTCATGATATCAATCA 1664 Query 1656 TTGAGAAAGCGACAAGCCAATCTGGTCAAGTGAGTTGGTTCGCAAACAACCTGAACCAGG 1715 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 1665 TTGAGAAAGCGACAAGCCAATCTGGTCAAGCGAGTTGGTTCGCAAACAACCTGAACCAAG 1724 Query 1716 CTCATCTCGATTACTTTTACTGGTTACTCGCTTGTCTCAGCTTCATTGGCTTAGCCTCCT 1775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1725 CTCATCTCGATTACTTTTACTGGTTACTCGCTTGTCTCAGCTTCATTGGCTTAGCCTCCT 1784 Query 1776 ACTTGTATGTTGCAAAGTCTTACGTCTCTAAAAGGCTCAACACCAGTTAAACCCAAAATC 1835 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1785 ACTTGTATGTTGCAAAGTCTTACGTCTCTAAAAGGCTCGACACCAGTTAAACCCAAAATC 1844 Query 1836 TCGCGTTTAAATGTCGCAGGTACTCTCTTTCCCTCTCTTGTGTACTTCTTGAATACACAA 1895 || ||||||||| ||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1845 TCTCGTTTAAATATCGCAGGTACTCTCTTTCCCTCTCTTGTGTAATTTTTGAATACACAA 1904 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94929230595 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5