BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472513
Length=1956
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22710.1 | Symbols: SUC2, SUT1, ATSUC2 | sucrose-proton symp... 3048 0.0
AT1G71880.1 | Symbols: SUC1, ATSUC1 | sucrose-proton symporter ... 826 0.0
AT1G71890.1 | Symbols: SUC5, ATSUC5 | Major facilitator superfa... 713 0.0
> AT1G22710.1 | Symbols: SUC2, SUT1, ATSUC2 | sucrose-proton symporter
2 | chr1:8030641-8033117 REVERSE LENGTH=1956
Length=1956
Score = 3048 bits (1650), Expect = 0.0
Identities = 1866/1966 (95%), Gaps = 31/1966 (2%)
Strand=Plus/Plus
Query 1 TCTTCGGATAATCCTATCC-TCTCTTCCTATAAATACCTCTCCAATCTTCCTCTTCCTCC 59
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 7 TCTTCGGATAATCCTATCCTTCTCTTCCTATAAATACCTCTCCACTCTTCCTCTTCCTCC 66
Query 60 ACCACTACAACCACCGCAACATCCACCGGAAAATTAAAAAACACTCTCAAATAAATTTC- 118
||||||||||||||||||||| ||||| |||||| |||||||| |||||||
Sbjct 67 ACCACTACAACCACCGCAACAACCACC---------AAAAACCCTCTCAAAGAAATTTCT 117
Query 119 --ttttt-ttACTTTCTTGGTTTGTCCAATATGGTCAGCCATCCAATGGAAAAAGCTGCA 175
||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 118 TTTTTTTCTTACTTTCTTGGTTTGTCAAATATGGTCAGCCATCCAATGGAGAAAGCTGCA 177
Query 176 AATGGTGCGTCGGCGTTGGAAACGCAGACGGGTGAGTTAGATCAGCCAGAACGGCTTCGA 235
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 178 AATGGTGCGTCTGCGTTGGAAACGCAGACGGGTGAGTTAGATCAGCCGGAACGGCTTCGT 237
Query 236 AAGATCATATCGGTGGCTTCGATTGCCGCCGGTGTACAGTTCGGTTGGGCTTTACAGTTA 295
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 238 AAGATCATATCGGTGTCTTCCATTGCCGCCGGTGTACAGTTCGGTTGGGCTTTACAGTTA 297
Query 296 TCTCTGTTGACACCTTACGTGCAGCTACTCGGAATCCCACATAAATGGGCTTCTCTGATT 355
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 TCTCTGTTGACTCCTTACGTGCAGCTACTCGGAATCCCACATAAATGGGCTTCTCTGATT 357
Query 356 TGGCTCTGTGGTCCAATCTCCGGTATGCTTGTCCAGCCTATCGTTGGTTACCACAGTGAC 415
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 358 TGGCTCTGTGGTCCAATCTCCGGTATGCTTGTTCAGCCTATCGTCGGTTACCACAGTGAC 417
Query 416 CGTTGCACCTCTAGATTCGGCCGTCGTCGTCCTTTCATCGTCGCCGGAGCTGGTTTAGTC 475
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 418 CGTTGCACCTCAAGATTCGGCCGTCGTCGTCCCTTCATCGTCGCTGGAGCTGGTTTAGTC 477
Query 476 ACGGTTGCTGTTTTCCTTATCGGTTACGCTGCCGATATAGGTCACAGCATGGGTGATAAG 535
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 478 ACCGTTGCTGTTTTCCTTATCGGTTACGCTGCCGATATAGGTCACAGCATGGGCGATCAG 537
Query 536 CTTAACAAACCGCCTAGAACGCGAGCTATAGCGATATTCGCTCTCGGGTTTTGGATTCTT 595
||| |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 538 CTTGACAAACCGCCGAAAACGCGAGCCATAGCGATATTCGCTCTCGGGTTTTGGATTCTT 597
Query 596 GACGTGGCTAACAACACCTTACAAGGACCCTGCAGAGCTTTCTTGGCTGATTTATCAGCA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 GACGTGGCTAACAACACCTTACAAGGACCCTGCAGAGCTTTCTTGGCTGATTTATCAGCA 657
Query 656 GGGAACGCAAAGAAAACGCGGACCGCAAACGCGTTTTTCTCGTTCTTT-ATGGCGGTTGG 714
|||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct 658 GGGAACGCTAAGAAAACGCGAACCGCAAACGCGTTTTTCTCGTT-TTTCATGGCGGTTGG 716
Query 715 AAACGTTTTGGGTTACGCGGCGGGATCTTACAGAAATCTCTACAAAGTTGTGCCTTTCAC 774
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 717 AAACGTTTTGGGTTACGCTGCGGGATCTTACAGAAATCTCTACAAAGTTGTGCCTTTCAC 776
Query 775 GATGACTGAGTCATGCGATCTCTACTGCGCAAACCTCAAAACGTGTTTTTTCCTATCCAT 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GATGACTGAGTCATGCGATCTCTACTGCGCAAACCTCAAAACGTGTTTTTTCCTATCCAT 836
Query 835 AACGCTTCTCCTCTTAGTCACTTTCATATCTCTCTGTTACGTGAAGGAGAAGCCATGGAC 894
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 837 AACGCTTCTCCTCATAGTCACTTTCGTATCTCTCTGTTACGTGAAGGAGAAGCCATGGAC 896
Query 895 GCCAGAGCCAACAGCAGATGGAAAAACCTCAAACGTTCCGTTTTTCGGAGAAATCTTTGG 954
||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| ||
Sbjct 897 GCCAGAGCCAACAGCCGATGGAAAAGCCTCCAACGTTCCGTTTTTCGGAGAAATCTTCGG 956
Query 955 AGCTTTCAAGGAACTAAAAAGACCGATGTGGATGCTTCTTATAGTCACTGCACTAAACTG 1014
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 957 AGCTTTCAAGGAACTAAAAAGACCCATGTGGATGCTTCTTATAGTCACTGCACTAAACTG 1016
Query 1015 GATCGCTTGGTTCCCTTTCCTTCTCTTCGACACTGATTGGATGGGCCGTGAGGTGTACGG 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 GATCGCTTGGTTCCCTTTCCTTCTCTTCGACACTGATTGGATGGGCCGTGAGGTGTACGG 1076
Query 1075 AGGAGACTCAGACGCAAAAGCAACCGCAGCCGCTAAGAAGCTTTACAACGACGGGGTCAG 1134
|||| |||||||||||| |||||||||||| |||||||||||||||||||||| |||||
Sbjct 1077 AGGAAACTCAGACGCAACCGCAACCGCAGCCTCTAAGAAGCTTTACAACGACGGAGTCAG 1136
Query 1135 AGCTGGTGCGTTGGGGCTTATGCTTAACGCTATTGTTCTTGGTTTCATGTCTCTTGGTGT 1194
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 AGCTGGTGCTTTGGGGCTTATGCTTAACGCTATTGTTCTTGGTTTCATGTCTCTTGGTGT 1196
Query 1195 GGAATGGATTGGTCGGAAATTGGGAGGAGCTAAAAGGCTTTGGGGTATTGTTAACTTCAT 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 TGAATGGATTGGTCGGAAATTGGGAGGAGCTAAAAGGCTTTGGGGTATTGTTAACTTCAT 1256
Query 1255 CCTCGCCATTTGCTTGGCCATGACGGTTGTGGTTACGAAACAGGCGGAGAATCACCGACG 1314
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1257 CCTCGCCATTTGCTTGGCCATGACGGTTGTGGTTACGAAACAAGCTGAGAATCACCGACG 1316
Query 1315 AGATCACGGCGGCGCTAAAACAGGACCACCTGGTAACGTCACAGCTGGTGCTTTAACTCT 1374
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1317 AGATCACGGCGGCGCTAAAACAGGTCCACCTGGTAACGTCACAGCTGGTGCTTTAACTCT 1376
Query 1375 CTTCGCCGTTCTCGGTATTCCTCAAGCCATTACGTTTAGTATTCCTTTTGCACTAGCTTC 1434
||||||| | |||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1377 CTTCGCCATCCTCGGTATCCCCCAAGCCATTACGTTTAGCATTCCTTTTGCACTAGCTTC 1436
Query 1435 CATATTTTCAACCAATTCCGGTGCCGGCCAAGGACTTTCCCTAGGTGTTCTGAATCTAGC 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 CATATTTTCAACCAATTCCGGTGCCGGCCAAGGACTTTCCCTAGGTGTTCTGAATCTAGC 1496
Query 1495 CATTGTCGTCCCTCAGATGGTTGTATCTGTGGGAGGTGGACCATTCGACGAACTATTCGG 1554
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1497 CATTGTCGTCCCTCAGATGGTAATATCTGTGGGAGGTGGACCATTCGACGAACTATTCGG 1556
Query 1555 TGGTGGAAACATTCCAGCATTTGTGTTAGGAGCGATCGCGGCAGCGGTAAGTGGCGTATT 1614
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1557 TGGTGGAAACATTCCAGCATTTGTGTTAGGAGCGATTGCGGCAGCGGTAAGTGGTGTATT 1616
Query 1615 GGCGTTAACGGTGTTGCCTTCGCCGCCTCCGGATGCTCCTGCGTTCAAAGCTACTATGGG 1674
|||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1617 GGCGTTGACGGTGTTGCCTTCACCGCCTCCGGATGCTCCTGCCTTCAAAGCTACTATGGG 1676
Query 1675 ATTTCATTGAATTTTAGCAGTGGTTGACTGGCTCTCTTTCTCTCATAAAACAGTAGTATT 1734
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1677 ATTTCATTGAATTTTAGCAGTGGTTGTTTGGCTCTCTTTCTCTCATAAAACAGTAGTGTT 1736
Query 1735 GTGCAAATCCTACATAAAGAAAAAAGAAAAGGAACTCAAACTCATTGGGTTGGTTTGTAT 1794
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1737 GTGCAAATCCTACATAAAGAAAAAAGAAAAGGAAATTAAACTCATTGGGTTGGTTTGTAT 1796
Query 1795 TTTACCTAAACCCActttgttcctttttctttttgtaactgaatttaaatttggagtaca 1854
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1797 TTTACCTAAACCCACGAAGTTCCTTTTTCTTTTTGTAACTCAATTTAAATTTGGAGTATA 1856
Query 1855 ttttactttttgTTACCTCAAAAACTCTCAAAGGCTTCAATATTACGACTTCATTGTTTC 1914
|||||||||||||||||| || || |||||||||||||||||||||||||| |
Sbjct 1857 TTTTACTTTTTGTTACCT-------TC--AA-GGCTTCAATATTACGACTTCATTGTT-C 1905
Query 1915 GGTAATA----CCTCATAATCTACAAAAGAATATGTAACGATCTAA 1956
||||||| |||||||| |||||||||| ||||||||||| |||
Sbjct 1906 GGTAATAAATACCTCATAAGCTACAAAAGATTATGTAACGATTTAA 1951
> AT1G71880.1 | Symbols: SUC1, ATSUC1 | sucrose-proton symporter
1 | chr1:27054180-27056341 FORWARD LENGTH=1937
Length=1937
Score = 826 bits (447), Expect = 0.0
Identities = 1132/1456 (78%), Gaps = 74/1456 (5%)
Strand=Plus/Plus
Query 229 GCTTCG-AAAGATCATATCGGTGGCTTCGATTGCCGCCGGTGTACAGTTCGGTTGGGCTT 287
|||||| ||| ||||| || || ||||| || |||||||||||||||||||| ||||| |
Sbjct 241 GCTTCGTAAA-ATCATCTCCGTCGCTTCCATCGCCGCCGGTGTACAGTTCGGGTGGGCCT 299
Query 288 TACAGTTATCTC-TGTTGACACCTTACGTGCAGCTACTCGGAATCCCACATAAATGGGCT 346
||||| | |||| | || || || ||||| || || ||||||||||| || |||||| |
Sbjct 300 TACAGCTCTCTCTTCTT-ACTCCGTACGTTCAACTCCTCGGAATCCCTCACAAATGGTCA 358
Query 347 TCTCTGATTTGGCTCTGTGGTCCAATCTCCGGTATGCTTGTCCAGCCTATCGTTGGTTAC 406
||||| |||||||||||||||||| ||||||| ||| |||| || || ||||| |||| |
Sbjct 359 TCTCTCATTTGGCTCTGTGGTCCAGTCTCCGGCATGATTGTTCAACCAATCGTCGGTTTC 418
Query 407 CACAGTGACCGTTGCACCTCTAGATTCGGCCGTCGTCGTCCTTTCATCGTCGCCGGAGCT 466
||||||||||| || | || | ||| || || |||||||||||||||| | |||||||
Sbjct 419 CACAGTGACCGATGTAGGTCCAAATTTGGTCGCCGTCGTCCTTTCATCGCCACCGGAGCC 478
Query 467 GGTTTAGTCACGGTTGCTGTTTTCCTTATCGGTTACGCTGCCGATATAGGTCACAGCATG 526
| | ||| | || ||||||||||| |||||||||||||| ||| | ||| | | |||
Sbjct 479 GCACTCGTCGCCGTCGCTGTTTTCCTCATCGGTTACGCTGCGGATTTCGGTTATAAAATG 538
Query 527 GGTGATAAGCT-TAACA-AACCGCCTAGAACG--CGAGCTATAGCGATATTCGCTCTCGG 582
|| ||||| || | | || | || || | |||||||||| ||| || ||||||||
Sbjct 539 GGAGATAAACTCGAGGAGAA--GGTTA-AA-GTTCGAGCTATAGGGATCTTTGCTCTCGG 594
Query 583 GTTTTGGATTCTTGACGTGGCTAACAACACCTTACAAGGACCCTGCAGAGCTTTCTTGGC 642
||| ||||| || ||||| || |||||||||||||||||||| ||| | |||||||| ||
Sbjct 595 GTTCTGGATCCTCGACGTAGCCAACAACACCTTACAAGGACCTTGCCGTGCTTTCTTAGC 654
Query 643 TGATTTATCAGCAGG-GAACGCAAAGAAAACGCGGA-CCGCAAACGCGTTTTTCTCGTTC 700
|| ||| | || || | |||| |||| ||||| || |||||||||||||||||| ||
Sbjct 655 CGACTTAGCCGCCGGTG-ACGCTAAGAGAACGC-GAGTCGCAAACGCGTTTTTCTCTTTT 712
Query 701 TTTATGGCGGTTGGAAACGTTTTGGGTTACGCGGCGGGATCTTACAGAAATCTCTACAA- 759
||||||||||||||||||||||||||||| ||||| || || |||| || ||| ||||
Sbjct 713 TTTATGGCGGTTGGAAACGTTTTGGGTTATGCGGCTGGTTCGTACACTAACCTCCACAAG 772
Query 760 A-GTTGTGCCTTTCACGATGACTGA-GTCATGCGATCTCTACTGCGCAAACCTCAAAACG 817
| ||| | || ||||| ||||| | | | |||||| |||| ||||| || ||||| ||
Sbjct 773 ATGTT-T-CCGTTCACAATGACAAAAG-CTTGCGATATCTATTGCGCCAATCTCAAGACT 829
Query 818 TGTTTTTTCCTATCCATAACGCTTCTCCTCTTAGTCACTTTCATATCTCTCTGTTACGTG 877
||||| ||| ||||||| || || |||||| | ||||| ||| ||||| || |||||
Sbjct 830 TGTTTCTTCTTATCCATCACTCTCCTCCTCATCGTCACCGTCACGTCTCTTTGGTACGTT 889
Query 878 AAGGAGAAGCCATGGACGCCAGA-GCC---AACA-GCAGATG--GA--A-AA-ACCTCAA 926
|| || || | |||| | || | ||| || | || || | || | || |||||||
Sbjct 890 AATGACAAACAATGGTCTCC-GCCGCCGCGAA-ATGCCGACGACGACGAGAAGACCTCAA 947
Query 927 ACGTTCCGTTT-TTCGGAGAAATCTTTGGAGCTTTCAAGGA-ACTAAAAAGACCGATGTG 984
|||||| ||| ||||| |||||||||||||| ||||| | | | ||| | || |||||
Sbjct 948 GCGTTCC-TTTGTTCGGTGAAATCTTTGGAGCATTCAAAGTCA-TGAAACGTCCCATGTG 1005
Query 985 GATGCTTCTTATAGTCACTGCACT-AAACTGGATCGCTTGGTTCCC-TTTCCTTCTCTTC 1042
||||||||| || ||||| || || ||||||||||||||||||||| |||| || | |||
Sbjct 1006 GATGCTTCTAATCGTCACGGC-CTTAAACTGGATCGCTTGGTTCCCATTTCTTT-TGTTC 1063
Query 1043 GACACTGATTGGATGGGCCGTGAGGTGTACGGAGGAGACTCAGACGCAAAAGCAACCGCA 1102
|| |||||||||||||| ||||| |||| ||| ||||| ||||| | ||| | ||| | |
Sbjct 1064 GATACTGATTGGATGGGTCGTGAAGTGTTCGGTGGAGATTCAGATGGAAATG-AAC-G-A 1120
Query 1103 GCCGCTAAGAAGCTTTACAACGACG-GG-GTC-AGAGCTGGTGCGTTGGGGCTT-ATGCT 1158
| | ||||| || |||| | | || ||| | | ||||||| |||| || ||| |
Sbjct 1121 TC-G--AAGAAACTATACA--GTCTTGGAGTCCA-ATCTGGTGCAATGGGA-TTGATGTT 1173
Query 1159 TAACGCTATTGTTCTTGGTTTCATGTCTCTTGGTGTGGAATGGATTGGTCGGAAATTGGG 1218
|||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1174 TAACTCTATAGTTCTTGGTTTCATGTCACTTGGTGTTGAATGGATTGGTCGGAAATTAGG 1233
Query 1219 AGGAGCTAAAAGGCTTTGGGGTATTGTTAACTTCATCCTCGCCATTTGCTTGGCCATGAC 1278
|||||||||| |||||||||||||||| || |||||||| ||| | | |||||||||||
Sbjct 1234 AGGAGCTAAACGGCTTTGGGGTATTGTCAATTTCATCCTAGCCGCTGGTTTGGCCATGAC 1293
Query 1279 GGTTGTGGTTACGAAACAGGCGGAGAATCACCGACGAGATCACGGCGGCGCTAAAACAGG 1338
|||| | ||||||||| || ||| ||||||| || | | || ||| | | | | ||
Sbjct 1294 GGTTCTCGTTACGAAATTCGCCGAGGATCACCG--GAAAAC-CGCCGGTGATTTAGCCGG 1350
Query 1339 ACC-ACCTGGTAACGTCACAGCTGGTGCTTTAACTCTCTTCGCCGTTCTCGGTATTCC-T 1396
||| | | | || || | |||||| ||||||| |||||| || ||||| ||||| || |
Sbjct 1351 ACCGAGC-GCTAGTGTTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCAT 1409
Query 1397 CAAGCCATTACGTTT-AGTATTCCTTTTGCACTAGCTTCCATATTTTCAACCAATTCCGG 1455
| || ||||| ||| |||| ||||||||| ||||| |||||||| |||| | |||||
Sbjct 1410 TA-GCTATTAC-TTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTCCGG 1467
Query 1456 TGCCGGCCAAGGACTTTCCCTAGGTGTTCTGAATCTAGCCATTGTCG-TCCCTCAGATGG 1514
||| |||||||||||||| |||| ||| | ||| | || ||||| | | || || |||
Sbjct 1468 TGCAGGCCAAGGACTTTCATTAGGAGTTTTAAATTTGGCGATTGT-GATACCACAAATGA 1526
Query 1515 TTGTATCTGTGGGAGGTGGACCATTCGACGAACTA-TTCGGTGGTGGAAACATT-CCAGC 1572
| || || | ||||||||||| ||||||| || ||||| ||||||||| || || ||
Sbjct 1527 TAGTCTCACTAGGAGGTGGACCTTTCGACGC-CTTGTTCGGCGGTGGAAAC-TTACCGGC 1584
Query 1573 ATTTGT-GTTAGGAGCGATCGCGGCAGCGGTAAGTGGCGTATTGGCGTTAACGGTGTTGC 1631
||| | ||| | ||| || || || ||| | ||||| ||||| |||||||| || || |
Sbjct 1585 GTTTATCGTT-GCAGCAATTGCAGCGGCGATTAGTGGAGTATTAGCGTTAACCGTTTTAC 1643
Query 1632 CTTCGCCGCCTCCGGA 1647
|||| || || |||||
Sbjct 1644 CTTCACCACCACCGGA 1659
> AT1G71890.1 | Symbols: SUC5, ATSUC5 | Major facilitator superfamily
protein | chr1:27058439-27060785 FORWARD LENGTH=1804
Length=1804
Score = 713 bits (386), Expect = 0.0
Identities = 1124/1465 (77%), Gaps = 112/1465 (8%)
Strand=Plus/Plus
Query 236 AAGATCATATCGGTGGCTTCGATTGCCGCCGGTGTACAGTTCGGTTGGGCTTTACAG-TT 294
|||||||| || || ||||| || |||||||||||||||||||| ||||| |||||| ||
Sbjct 150 AAGATCATCTCCGTCGCTTCAATCGCCGCCGGTGTACAGTTCGGGTGGGCCTTACAGCTT 209
Query 295 ATCTCTGT-TGACACCTTACGTGCAGCTACTCGGAATCCCACATAAATGGGCTTCTCT-G 352
||||| | |||| |||||| | || || ||||| ||||| || |||||| | ||| |
Sbjct 210 -TCTCT-TCTGACTCCTTACATACAACTCCTCGGGATCCCTCACAAATGGTCGTCT-TAC 266
Query 353 ATTTGGCTCTGTGGTCCAATCTCCGGTATGCTTGTCCAGCCTATCGTTGGTTACCACAGT 412
|| ||||| |||||||| |||||||| ||| |||| || || ||||| ||||||||||||
Sbjct 267 ATGTGGCTTTGTGGTCCTATCTCCGGCATGATTGTTCAACCGATCGTCGGTTACCACAGT 326
Query 413 GACCGTTGC-ACCTCTAGATTCGGCCGTCGTCGTCCTTTCATCGTCGCCGGAGCT-GGTT 470
||||| ||| | || |||||||| || |||||||||||||| | |||||||| | |
Sbjct 327 GACCGATGCGA-GTCCAGATTCGGTCGCCGTCGTCCTTTCATTGCCGCCGGAG-TCGCAC 384
Query 471 TAGTCA-CGGT-TGCTGTTTTCCTTATCGG-TTACGCTGCCGATATAGGTCACAGCATGG 527
| || | | || | | |||||||||||||| || ||| || ||||| || || || | |
Sbjct 385 TCGT-AGCCGTCT-CGGTTTTCCTTATCGGATT-CGCGGCGGATATGGGACATAGTTTTG 441
Query 528 GTGATAAGCTTAACAAAC-CGCCT-AGAACGCGAGCTA-TAGCGATATTCGCT--CTCGG 582
| ||||| || | ||| | | || || ||||| | || || ||| || | |||
Sbjct 442 GAGATAAACTCGA-GAACAAG-GTAAGGACTCGAGCCATTA-TAATCTTC-CTAAC-CGG 496
Query 583 GTTTTGGATT-CTTGACGTGGCTAACAACACCTTACAAGGACCCTGCAGAGCTTTCTTGG 641
||||||| || || ||||||||||||||||||||||||||||| ||| | |||||||| |
Sbjct 497 GTTTTGG-TTCCTCGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAG 555
Query 642 CTGATTTATCAGCAGGGA-ACGC-AAAGAAAACGCGGA-CCGCAAACGCGTTTTTCTCGT 698
| |||||| | || ||| |||| ||| ||||||| || ||||||||||| |||||| |
Sbjct 556 CCGATTTAGCCGC-CGGAGACGCTAAA-AAAACGC-GAGTCGCAAACGCGTGTTTCTCCT 612
Query 699 TCTTTATGGCGGTTGGAAACGTTTTGGGTTACGCGGCGGGATCTTACAGAAATCT-CTAC 757
|||||||||||||||||||||||||||||||||| || |||||||||| || || | ||
Sbjct 613 TCTTTATGGCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTC-AC 671
Query 758 AAA--GTTGTGCCTTTCACGATGACTGA-GTCATGCGATC-TCTACTGCGCAAACCTCAA 813
||| ||| | |||||||| ||||| | | | ||||| | |||| || || || |||||
Sbjct 672 AAAATGTT-T-CCTTTCACAATGACAAAAG-CTTGCGA-CATCTATTGTGCGAATCTCAA 727
Query 814 AACGTGTTTTTTCCTATCCATAACGCTTCTCCTCT-TAGTCACTTTCATA-TCTCTCTGT 871
|| ||||| ||| ||||||| || || ||||| | | ||||| ||| | ||||| ||
Sbjct 728 GACTTGTTTCTTCTTATCCATCACTCTCCTCCT-TATCGTCACATTC-TCGTCTCTATGG 785
Query 872 TACGTGAAGGAGAAGCCATGGACGCCAGAGCCAAC-AG-CA-G-ATGGA-AAAACCTCAA 926
||||| || || || | |||| | ||| | || || || | | ||| ||||| ||||
Sbjct 786 TACGTTAAAGACAAACAATGGTCTCCACCTC-AAGGAGACAAGGA-GGAGAAAACATCAA 843
Query 927 A-CGTTCCGTT-TTTCGGAGAAATCTTTGGAGCT-TTCAAGGA-AC-TAAAAAGACCGAT 981
| || || ||| |||||||||||||||||| || | | | || | ||| | || ||
Sbjct 844 GTCTTTTT-TTCTTT-GGAGAAATCTTTGGAGCTGTT-A-G-ACACATGAAACGTCCCAT 898
Query 982 G-TGGATGCTTCTTATAGTCACTG-CACTAAACTGGATCGCTTGGTTCCC-TTTCCTTCT 1038
| || |||||||| || ||||| | || ||| |||||||||||||| || ||| || |
Sbjct 899 GGTG-ATGCTTCTAATTGTCACGGTCATTAAT-TGGATCGCTTGGTTTCCATTTATTT-T 955
Query 1039 CT-TCGACACTGATTGGATGGGCCGTGAGGTGTACGGAGGAGACTCAGACGCAAAAGCAA 1097
| | || || ||||||||||| ||||| |||||||| ||| ||||||| | | | | ||
Sbjct 956 GTAT-GATACCGATTGGATGGGTCGTGAAGTGTACGGTGGAAACTCAGATGGAGATG-AA 1013
Query 1098 CCGCAGCCGCTAAGAAGCTTTACAACGACGGGGT-CAGAGCTGGTGCGTTGGGGCTT-AT 1155
| | | | | ||||| |||||| || | || || ||| |||||||| ||||| || ||
Sbjct 1014 C-G-ATC-G--AAGAAACTTTACGACCAAGGAGTTCAG-GCTGGTGCATTGGGA-TTGAT 1066
Query 1156 GCTTAACGCTATTGTTCTTGGTTTCATGTCTCTTGGTGTGGAATGGATTGGTCGGAAATT 1215
| |||| |||| ||||||||||| |||| |||||||| |||| ||||||||||||| |
Sbjct 1067 GTTTAATTCTATACTTCTTGGTTTCGTGTCACTTGGTGTTGAATCGATTGGTCGGAAAAT 1126
Query 1216 GGGAGGAGCTAAAAGGCTTTGGGGTAT-TGTTAACTTCATCCTCGCCATTTGCTTGGCCA 1274
||||||||||||| | |||||||| || ||| || ||||| |||||||| | |||||||
Sbjct 1127 GGGAGGAGCTAAACGACTTTGGGG-ATGTGTGAATTTCATACTCGCCATAGGTTTGGCCA 1185
Query 1275 TGACGGTTGTGGTTACGAAA-CAGGCGGAGAATCACCGACGAGATCACGGCGG-CGCTAA 1332
|||||||| | ||||| ||| | ||| ||| ||||||| || ||| | ||| | ||
Sbjct 1186 TGACGGTTCTTGTTACTAAATC-GGCTGAGCATCACCGG-GAAATCGC--CGGTC-CTTT 1240
Query 1333 AACAGGACC-ACC--TGGTAACGTCACAGCTGGTGC-TTTAACTCTCTTCGCCGTTCTCG 1388
| | ||||| | | ||||| | | ||| || | |||| |||||| ||||||| |
Sbjct 1241 AGCCGGACCGAGCAGTGGTAT--TAA-AGCCGGAGTATTTAG-TCTCTTTACCGTTCTTG 1296
Query 1389 GTATTCCTCAA-G-CCATTACGTTT-AGTATTCCTTTTGCACTAGCTTCCATATTT-TCA 1444
|||| || || | ||||||| || |||||||| ||||||||||| ||||| ||| |||
Sbjct 1297 GTAT-CC-CATTGGCCATTAC-TTACAGTATTCCATTTGCACTAGCGTCCAT-TTTCTCA 1352
Query 1445 ACCAATTCCGGTGCCGGCCAAGGACTTTCCCTAGGTGTTCTGAATCTAGCCATT-GTCGT 1503
||||||||||||||||||||||||||||| |||| ||| | ||| |||| ||| || |
Sbjct 1353 ACCAATTCCGGTGCCGGCCAAGGACTTTCATTAGGCGTTTTAAATATAGCGATTTGTA-T 1411
Query 1504 CCCTCAGATGGTTGTATC-TGTGGGAGGTGGACCATTCGACGAACTATTCGGTGGTGGAA 1562
|| || ||| | ||||| | | | |||||||||| |||| | |||||| |||||||
Sbjct 1412 ACCACAAATGATAGTATCAT-TCTCAAGTGGACCATTGGACGCTCAATTCGGCGGTGGAA 1470
Query 1563 ACATTCCAGCATTTGTGTTAGGAGCGATCGCGGCAGCGGTAAGTGGCGTATTGGCGTTAA 1622
|| | || |||||||| | ||||| || || || ||||| ||||| || || |||||||
Sbjct 1471 ACCTACCTTCATTTGTGGTCGGAGCAATTGCCGCGGCGGTTAGTGGAGTCTTAGCGTTAA 1530
Query 1623 CGGTGTTGCCTTCGCCGCCTCCGGA 1647
| || || ||||| |||||||||||
Sbjct 1531 CCGTTTTACCTTCACCGCCTCCGGA 1555
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96887051850
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5