BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472532
Length=2739
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22870.1 | Symbols: | Protein kinase family protein with AR... 4451 0.0
AT1G71410.1 | Symbols: | ARM repeat superfamily protein | chr1... 2296 0.0
> AT1G22870.1 | Symbols: | Protein kinase family protein with
ARM repeat domain | chr1:8089501-8094173 FORWARD LENGTH=2742
Length=2742
Score = 4451 bits (2410), Expect = 0.0
Identities = 2633/2743 (96%), Gaps = 5/2743 (0%)
Strand=Plus/Plus
Query 1 ATGTCGATTAATATGAGAACGCTGACGCAAGCACTAGCCAAAACGGCTGCGGTGATTGAG 60
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGTCGATTAATATGAGAACGCTAACGCAAGCACTAGCCAAAACGGCTGCAGTGATTGAG 60
Query 61 AAGACGGTTCAAACCACAGTCCAGGAGGTTACAGGTCCCAAACCTCTTCAAGACTACGAC 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 61 AAGACGGTTCAAACCACAGTCCAGGAGGTTACAGGTCCCAAACCTCTACAAGACTACGAG 120
Query 121 CTTCTCGATCAGATCGGTTCCGGTGGTCCTGGTCTCGCCTGGAAGCTTTACTCCGCCAAG 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 121 CTTCTCGATCAGATCGGTTCCGGTGGTCCTGGTCTCGCTTGGAAGCTTTACTCCGCCAAG 180
Query 181 GCACGTGACTCCACACGACCTCACCAGTATCCAACCGTCTGCGTCTGGGTGCTTGATAAG 240
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||||
Sbjct 181 GCACGTGACTCCACGCGGCCTCAGCAGTATCCAACAGTTTGCGTCTGGGTGCTTGATAAG 240
Query 241 CGCGCTTTATCTGAGGCTCGTGGTAGGGCGGGATTATCTAAAGCTGCTGAAGATGCGTTT 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 241 CGCGCTTTATCTGAGGCTCGTGCTAGGGCGGGATTATCTAAAGCTGCTGAAGATGCGTTT 300
Query 301 CTCGATTTGATTCGTGCTGATGCGGGAAAGCTTGTGCGGTTGAGACATCCCGGTGTGGTT 360
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 301 CTCGATTTGATTCGTGCTGATTCGGGGAAGCTTGTGCGGTTGAGACATCCCGGTGTGGTT 360
Query 361 CATGTGGTTCAGGCGCTTGATGAGAATAAGAATGCTATGGCTATGGTTACGGAGCCGCTC 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CATGTTGTTCAGGCGCTTGATGAGAATAAGAATGCTATGGCTATGGTTACGGAGCCGCTC 420
Query 421 TTCGCATCCGTGGCTAACGCGCTTGGGAATGTGGAAAATGTGGATAACGTTCCGAAAGAT 480
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 421 TTCGCATCCGTGGCTAATGCGCTTGGGAATGTGGAAAATGTTGATAACGTTCCCAAAGAT 480
Query 481 CTTAAGGCTATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTTCTCCAAATTGCAGAG 540
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTTAAGTCCATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTTCTCCAAATTGCAGAG 540
Query 541 ACATTGAACTTTCTTCATAATAACGCCCATCTTATTCATCGTGCTGTATCTCCAGAGAAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 541 ACATTGAACTTTCTTCATAATAACGCCCATCTTATTCATCGTGCTGTATCTCCGGAGAAC 600
Query 601 GTTTATATTACTTCGGCTGGTTCTTGGAAGCTTGCCGGATTTGGCTTTGCTATTTCAGAA 660
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 601 GTTTTTATTACTTCGGCTGGTTCCTGGAAGCTTGCCGGATTTGGCTTTGCTATTTCACAA 660
Query 661 GCACAGAATGGGAATTTGGATAACTTGCAATCATTCCACTACTCTGAATATGATGTTGAG 720
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GCACAGGATGGGAATTTGGATAACTTGCAATCATTCCACTACTCTGAATATGATGTTGAG 720
Query 721 GACTCAATCCTGCCACTCCAACCATCTTTAAATTATACTGCACCTGAATTGGTGCGGAGC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GACTCAATCCTGCCACTCCAACCATCTTTAAATTATACTGCACCTGAATTGGTGCGGAGC 780
Query 781 AAAACTTCTTCGGCTGGAGTTTCTTCAGACATTTTTAGTTTCGGATGCCTCGCCTATCAT 840
||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||
Sbjct 781 AAAACTTCTTCGGCTGGAGTTTCTTCAGATATTTTTAGTTTCGGATGCCTCACTTATCAT 840
Query 841 TTAGTGGCACGGAAACCATTGTTTGATTGCCATAACAATGTCAAGATGTACATGAACACA 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 841 TTAGTGGCACGGAAACCATTGTTTGATTGTCATAACAATGTCAAGATGTACATGAACACA 900
Query 901 TTGAACTATCTAACAAATGAAACTTTCTCATCTATACCCTCGGACTTGGTATCTGATTTA 960
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TTGAACTATTTAACAAATGAAACTTTCTCATCTATACCCTCGGACTTGGTATCTGATTTA 960
Query 961 CAACGGATGCTATCAATGAACGAGTCATTTAGACCAACTGCATTAGATTTCACAGGATCT 1020
|||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||
Sbjct 961 CAACGGATGCTATCAATGAACGAGTCATATAGACCAACAGCTTTAGATTTCACAGGATCT 1020
Query 1021 AATTTTTTCCGAAGCGACACTAGGTTGCGTGCTCTCCGTTTCCTTGATCATATGCTTGAA 1080
| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1021 AGTTTTTTCCGAAGCGACACTAGGTTGCGTGCCCTCCGTTTCCTTGATCATATGCTTGAG 1080
Query 1081 AGAGACAACATGCAGAAGTCTGAGTTCTTAAAAGCATTATCAGATATGTGGAAAGATTTT 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1081 AGAGACAACATGCAGAAGTCTGAGTTCTTAAAAGCATTATCAGATATGTGGAAAGACTTT 1140
Query 1141 GATTCTCGGGTATTACGGTATAAGGTGCTTCCTCCTCTTTGTGCTGAACTTAGGAATTTG 1200
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GATTCTCGTGTATTACGGTATAAGGTGCTTCCTCCTCTTTGTGCTGAACTTAGGAATTTG 1200
Query 1201 GGTATGCAACCAATGATTCTTCCCATGGTTCTAACTATAGCAGAGTCTCAGGATAAGAAT 1260
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1201 GTTATGCAACCAGTGATTCTTCCCATGGTTCTAACTATAGCAGAGTCTCAGGATAAAAAT 1260
Query 1261 GACTTTGAGTTGACAACGCTCCCAGCCCTTGTTCCTGTTC-TGAGTACTGCTACGGGTGA 1319
||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct 1261 GACTTTGAGTTGACAACGCTCCCAGCCCTTGTTCCTG-TCTTAAGTACTGCTACGGGTGA 1319
Query 1320 TACATTACTGTTGCTTATAAAGCGGGCAGAGCTTATTATTAACAAGACTAATGCAGAGCA 1379
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1320 TACATTACTGTTGCTTATAAAGCGTGCAGAGCTAATTATTAACAAGACTAATGCAGAGCA 1379
Query 1380 TCTTGTATCACATGTCCTCCCTTTGCTTCTCCGAGCCTACAACGATAACGATGTTCGGAT 1439
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 1380 TCTTGTATCACATGTCCTCCCTTTGCTTCTCCGAGCCTACAATGATAATGATGTCCGGAT 1439
Query 1440 ACAGGAGGAAGTTCTGAAAAGATCTACATCTGTTGCTAAGCAACTCGATGGTCAGGTTGT 1499
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1440 ACAGGAGGAAGTTCTGAAAAGATCTACATCTGTTGCTAAACAACTCGATGGTCAGGTTGT 1499
Query 1500 AAGGCAAGCAATTTTGCCTCGCGTTCATGGCTTGGCTCTCAAAACCACAGTTGCTGCCGT 1559
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCTCAAAACCACAGTTGCTGCCGT 1559
Query 1560 CAGAGTAAATGCTTTGCTTTGCTTAGCAGAGCTGGTTCAAACACTTGATAAACTCGCTGT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 CAGAGTAAATGCTTTGCTTTGCTTAGCAGAGCTGGTTCAAACACTTGATAAACTCGCTGT 1619
Query 1620 TACTGAAATTCTGCAAACAATTCAACGCTGTACTGCTGTTGATCGTTCTGCACCAACCCT 1679
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1620 TACTGAAATTCTGCAAACAATTCAACGCTGTACTGCTGTTGATCGTTCTGCACCGACCCT 1679
Query 1680 TATGTGTACTCTTGCAATCGCAAACGCAATTCTCAAGCAGTATGGAGTTGAATTCACTTC 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 TATGTGTACTCTTGCAATCGCAAACGCAATTCTCAAGCAGTATGGAGTTGAATTCACTTC 1739
Query 1740 AGAACACGTGCTTCCCCTGATTATACCGCTTCTCACTGCCCAACAATTGAATGTCCAACA 1799
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1740 AGAACACGTACTTCCCCTGATTATACCACTTCTCACTGCCCAACAATTGAATGTCCAACA 1799
Query 1800 GTTTGCCAAATATATTCTATTTGTCAAGGATATTCTCAGGAAAATAGAGGAAAAAAGAGG 1859
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1800 GTTTGCCAAATATATTCTATTTGTCAAAGATATTCTCAGGAAAATAGAGGAAAAAAGAGG 1859
Query 1860 AGTTACAGTAAATGATTCTGGAGTCCCAGAAGTAAAACCAGGCTCTGTTGCGGATGGGCT 1919
|||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 1860 AGTTACCGTAAATGATTCTGGAGTCCCAGAAGTAAAACCAGGCTGTGTGGCGGATGGGCT 1919
Query 1920 TCAGTTTCAAACATCAACCCAAAAAACTGAAAAGGTTGCTTCTGCAGCAAAGAACAGTCC 1979
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 TCAGTTTCAAACACCAACCAAAAAAACTGAAAAGGTTGCTTCTGCAGCAAAGAACAGTCC 1979
Query 1980 TGCATGGGATGAAGATTGGGCCCTTCCGACCAAGATTTCTGCTCCTAGAGATCCTGAACC 2039
||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||
Sbjct 1980 AGCATGGGATGAAGATTGGGCCCTCCCGACCAAAATTTCTGCTCCAAGAGATCCTGGACC 2039
Query 2040 CACAAACTCTC---AGTTTAACAGTTCTACAGTTCAGTCACAGTCATCGAACCGGACATC 2096
| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2040 CGCAAACTCTCCTCAGTTTAACAATTCTACAGTTCAGTCACAGTCATCGAACCGGACATC 2099
Query 2097 AGTACCAACAACATGCCCTGCAGTTGACCTAGAGTGGCCTCCAAGACAATCTTCCAGTGC 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2100 AGTACCAACAACATGCCCTGCAGTTGACCTAGAGTGGCCTCCAAGACAATCTTTCAATGC 2159
Query 2157 CACTGCTCAGCCAGCTAATGATGAGACACGGATAAACGAAGCAGGAACATCATCAACTCC 2216
||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||
Sbjct 2160 CACTGCTCAGCCAGCTAATGATGAGACTCGGATAAACGCAGCAGGAACACCAACAACTCC 2219
Query 2217 AAGTTTTGATGAACTAGACCCTTTTGCTAACTGGCCACCACGGCCCAACGGTGCTCCCAC 2276
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 2220 GAGTTTTGATGAACTAGACCCTTTTGCTAACTGGCCACCACGGCCCAACAGTGCTTCCAC 2279
Query 2277 TGCCTCTGGCGGTTTCCACAACAATACTACCACTCAACCTCCACTTAACAACAGTGGTTC 2336
|||||||||||||||||| |||| ||||||||||||||||||| | |||||||| |||||
Sbjct 2280 TGCCTCTGGCGGTTTCCATAACAGTACTACCACTCAACCTCCAATCAACAACAGCGGTTC 2339
Query 2337 TGGTTTGAGTAACAATTTAACAGTCGGTAGGCAGTTTCAGACAGCTAACAACGACTTCTG 2396
||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 2340 TGGTTTGAGAAACAATTTAACAGACGGTAGGCAGTTTCAGACAACTAACAACGACTTCTG 2399
Query 2397 GGCCTTCGGCAATGCCTCCCTCTCTTCTATGAAATCACAGCAAGAGACTTCGGGTATCAG 2456
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 GGCCTTTGGTAATGCCTCCCTCTCTTCTATGAAATCACAGCAAGAGACTTCGGGTATCAG 2459
Query 2457 CGCAAGTAACCCACATCCTATGAACTCTTTCGGGATTCAGAATCAGAACCAAGGAATGCC 2516
||||||||| || ||||| ||| |||||| |||||||||||||||||||||||||||||
Sbjct 2460 GGCAAGTAACGCAGATCCTTTGACCTCTTTTGGGATTCAGAATCAGAACCAAGGAATGCC 2519
Query 2517 GTCTTTTGGAAGCAGTTCATATGGTAACCAGAAGCCGCCAGCAGACATCAGTTCCATATT 2576
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 2520 GTCTTTTGGAAGCAGTTCATATGGTAACCAGAAGCCGCAAGCAGACATCAGCTCCATATT 2579
Query 2577 CAATTCAAGCAAAACCGAGCAATCTGCGATGAAACTCGCACCACCGCCTTCAATAGCTGT 2636
|| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 CAGTTCAAGCAGAACAGAGCAATCTGCGATGAAACTCGCACCACCGCCTTCAATAGCTGT 2639
Query 2637 GGGAAGAGGAAAGGGAAGGGGTAGAAGTGGGACATCTACCTCAAATACAAGTGGTTCAAA 2696
||||||||||| |||||||||||||||||||||||||| ||| || ||| |||||||||
Sbjct 2640 GGGAAGAGGAAGGGGAAGGGGTAGAAGTGGGACATCTATCTCTAAGCCAAATGGTTCAAA 2699
Query 2697 GCAGCAACAAACCGAGCAGCCATCGCTGTTAGATCTTTTGTGA 2739
||||||||||||||| |||||||| |||||||||| ||||||
Sbjct 2700 GCAGCAACAAACCGAACAGCCATCTTTGTTAGATCTATTGTGA 2742
> AT1G71410.1 | Symbols: | ARM repeat superfamily protein | chr1:26912726-26917712
REVERSE LENGTH=3271
Length=3271
Score = 2296 bits (1243), Expect = 0.0
Identities = 1970/2315 (85%), Gaps = 73/2315 (3%)
Strand=Plus/Plus
Query 1 ATGTCGATTAATATGAGAACGCTGACGCAAGCACTAGCCAAAACGGCTGCGGTGATTGAG 60
|||||||| || |||| ||| | || ||||| ||||| | ||||||||| |||||||||
Sbjct 198 ATGTCGATAAACATGAAAACATTTACTCAAGCTCTAGCTAGAACGGCTGCTGTGATTGAG 257
Query 61 AAGACGGTTCAAACCACAGTCCAGGAGGTTACAGGTCCCAAA-CCTCTTCAAGACTACGA 119
||||||||||| |||||||| ||||| ||||| || ||||| ||||||| || |||||
Sbjct 258 AAGACGGTTCATACCACAGTACAGGAAGTTAC-GGGACCAAAGGCTCTTCAGGATTACGA 316
Query 120 CCTTCTCGATCAGATCGGTTCCGGTGGTCCTGGTCTCGCCTGGAAGCTTTACTCCGCCAA 179
|| || |||||||||||||||| |||||||||||| || |||||||| ||| | || ||
Sbjct 317 GCTACTTGATCAGATCGGTTCCGCTGGTCCTGGTCTAGCTTGGAAGCTATACGCAGCTAA 376
Query 180 GGCACGTGACTCCAC-ACGACCTCACCAGTATCCAACCGTCTGCGTCTGGGTGCTTGATA 238
||| ||||| ||||| | | || || ||||| || || ||||| || ||| |||||||||
Sbjct 377 GGCGCGTGATTCCACGA-GGCCACAGCAGTACCCGACGGTCTGTGTATGGATGCTTGATA 435
Query 239 AGCGCGCTTTATCTGAGGCTCGTGGTA-GGGCGGGA-TTATCTAAAGCTGCTGAAGATGC 296
|||| ||||| || ||||||||| ||| | || | | || ||||| || |||||||||||
Sbjct 436 AGCGTGCTTTGTCGGAGGCTCGT-GTACGAGC-GAATTTGTCTAAGGCAGCTGAAGATGC 493
Query 297 GTTTCTCGATTTGATTCGTGCTGATGCGGGAAAGCTTGTGCGGTTGAGACATCCCGGTGT 356
|||||| ||| ||||||| ||||||||||| ||||| ||| ||||||| ||||| |||||
Sbjct 494 GTTTCTTGATCTGATTCGAGCTGATGCGGGGAAGCTGGTGAGGTTGAGGCATCCTGGTGT 553
Query 357 GGTTCATGTGGTTCAGGCGCTTGATGAGAATAAGAATGCTATGGCTATGGTTACGGAGCC 416
|||||||||||| || |||||||||||||||||||||||||||||| | |||||||||||
Sbjct 554 GGTTCATGTGGTGCAAGCGCTTGATGAGAATAAGAATGCTATGGCTTTAGTTACGGAGCC 613
Query 417 GCTCTTCGCATCCGTGGCTAACGCGCTTGGGAATGTGGAAAATGTGGATAACGTTCCGAA 476
||| || || || |||||||| |||||||| ||||| || ||||||| ||| || |||||
Sbjct 614 GCTTTTTGCTTCTGTGGCTAATGCGCTTGGTAATGTTGAGAATGTGGGTAATGTGCCGAA 673
Query 477 AGATCTTAAGGCTATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTTCTCCAAATTGC 536
|||||| || | ||||||||||||||||||||||||||||||||||| ||||| ||| |
Sbjct 674 AGATCTGAAATCAATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTGCTCCAGATTTC 733
Query 537 AGAGACATTGAACTTTCTT-CATAATAACGCCCATCTTATTCATCGTGCTGTATCTCCAG 595
|||||| ||||| ||||| || |||||||| |||| || ||||| || | |||||||
Sbjct 734 TGAGACACTGAAC-TTCTTACACAATAACGCAAATCTCATCCATCGAGCCATTTCTCCAG 792
Query 596 AGAATGTT-TATATTACTTCGGCTGGTTCTTGGAAGCTTGCCGGATTTGGCTTTGCTATT 654
|||||||| | ||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 793 AGAATGTTCT-TATTACTTCAGCTGGTTCTTGGAAGCTTGCCGGGTTTGGTTTTGCTATT 851
Query 655 TCAGAAGCACAGAATGGGAATTTGGATAACTTGCAATCATTCCACTACTCTGAATATGAT 714
|||| ||||||| |||||||||||||||| ||||||| |||||||| |||||||| ||
Sbjct 852 TCAGCAGCACAGGCTGGGAATTTGGATAACATGCAATCGTTCCACTATTCTGAATACGAC 911
Query 715 GTTGAGGACTCAATCCTGCCACTCCAACCATCTTTAAATTATACTGCACCTGAATTGGTG 774
|| ||||| ||||| |||||| |||| |||||| ||||||| |||||||||||| || ||
Sbjct 912 GTCGAGGATTCAATACTGCCAGTCCAGCCATCTCTAAATTACACTGCACCTGAACTGATG 971
Query 775 CGGAGCAAAACTTCTTCGGCTGGAGTTTCTTCAGACATTTTTAGTTTCGGATGCCTCGCC 834
|| ||||||| | |||| ||||||| ||| || |||||||||||||| |||||||| |||
Sbjct 972 CGCAGCAAAAGTCCTTCAGCTGGAGCTTCGTCGGACATTTTTAGTTTTGGATGCCTTGCC 1031
Query 835 TATCATTTAGTGGCACGGAAACCATTGTTTGATTGCCATAACAATGTCAAGATGTACATG 894
||||||||||| || |||||||| |||||||| ||| |||| ||||||||||||||||||
Sbjct 1032 TATCATTTAGTTGCTCGGAAACCGTTGTTTGACTGCAATAATAATGTCAAGATGTACATG 1091
Query 895 AACACATTGAACTATCTAACAAATGAAACTTTCTCATCTATACCCTCGGACTTGGTATCT 954
||||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1092 AACACGTTGAACTATATAACAAATGAATCTTTCTCATCTATACCCTCGGAATTGGTATCT 1151
Query 955 GATTTACAACGGATGCTATCAATGAACGAGTCATTTAGACCAACTGCATTAGATTTCACA 1014
||||| ||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||
Sbjct 1152 GATTTGCAAAGGATGCTATCAACGAACGAGTCCTTTAGACCAACAGCATTAGATTTCACA 1211
Query 1015 GGATCTAATTTTTTCCGAAGCGACACTAGGTTGCGTGCTCTCCGTTTCCTTGATCATATG 1074
||||| |||||||||||||| ||| ||||||| ||||||||||| |||||||||||| ||
Sbjct 1212 GGATCGAATTTTTTCCGAAGTGACGCTAGGTTACGTGCTCTCCGCTTCCTTGATCATTTG 1271
Query 1075 CTTGAAAGAGACAACATGCAGAAGTCTGAGTTCTTAAAAGCATTATCAGATATGTGGAAA 1134
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1272 CTTGAAAGAGATAACATGCAAAAGTCCGAGTTCTTAAAAGCATTATCAGATATGTGGAAA 1331
Query 1135 GATTTTGATTCTCGGGTATTACGGTATAAGGTGCTTCCTCCTCTTTGTGCTGAACTTAGG 1194
||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1332 GATTTTGATTCCCGTGTATTACGGTATAAGGTGCTTCCACCTCTTTGTGCGGAACTTAGG 1391
Query 1195 AATTTGGGTATGCAACCAATGATTCTT-CCCATGGTTCTAACTATAGCAGAGTCTCAGGA 1253
||||| | | |||||||||| | |||| || |||||||||||||||||| ||||||||||
Sbjct 1392 AATTTAGTTTTGCAACCAAT-AATCTTGCCAATGGTTCTAACTATAGCACAGTCTCAGGA 1450
Query 1254 TAAGAA-TGACTTTGAGTTGACAACGCTCCCAGCCCTTGTTCCTGTTCTGAGTACTGCTA 1312
| |||| |||||||||| ||| ||| || || || ||||||||||||||||||||||||
Sbjct 1451 T-AGAACTGACTTTGAGCTGATAACACTTCCGGCTCTTGTTCCTGTTCTGAGTACTGCTT 1509
Query 1313 CGGGTGATACATTACTGTTGCTTAT-AAAGCGGGCAGAGCTTATTATTAACAAGACTAAT 1371
| || |||||||||||| ||||| | ||| | ||||| ||||||| |||||||||| ||
Sbjct 1510 CAGGAGATACATTACTGCTGCTTGTGAAA-CATGCAGATCTTATTACTAACAAGACTGAT 1568
Query 1372 -GCAGAGCATCTTGTATCACATGTCCTCCCTTTGCTTCTCCGAGCCTACAACGATAACGA 1430
| |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct 1569 AG-TGAGCATCTTGTATCGCACGTCCTCCCTTTGCTTCTGCGAGCCTACAATGATAACGA 1627
Query 1431 TGTTCGGATACAGGAGGAAGTTCTGAAAAGATCTACATCTGTTGCTAAGCAACTCGATGG 1490
||| || || |||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 1628 TGTCCGCATTCAGGAGGAAGTTCTTAAAAGATCCACATCTGTGGCTAAGCAACTCGATGG 1687
Query 1491 TCAGGTTGTAAGGCAAGCAATTTTGCCTCGCGTTCATGGCTTGGCTCTCAAAACCACAGT 1550
||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1688 TCAGGTTGTGAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCTCAAAACTACAGT 1747
Query 1551 TGCTGCCGTCAGAGTAAATGCTTTGCTTTGCTTAGCAGAGCTGGTTCAAACACTTGATAA 1610
|||||| |||||||||||||||||||| |||||||| ||| |||| ||||| ||||||||
Sbjct 1748 TGCTGCGGTCAGAGTAAATGCTTTGCTCTGCTTAGCTGAGTTGGTGCAAACGCTTGATAA 1807
Query 1611 -ACTCGCTGTTACT-GAAATTCTGCAAACAATTCAACGCTGTACTGCTGTTGATCGTTCT 1668
|| || | || | ||||||||| ||||||||||||| |||||||| || |||||||||
Sbjct 1808 GCCT-GCCGCTA-TCGAAATTCTGGAAACAATTCAACGGTGTACTGCCGTAGATCGTTCT 1865
Query 1669 GCACCAACCCTTATGTGTACTCTTGCAATCGCAAACGCAATTCTCAAGCAGTATGGAGTT 1728
||||||||||| |||||||| ||||| | ||||||||||| ||||| ||||||||||||
Sbjct 1866 GCACCAACCCTAATGTGTACCCTTGCTGTGGCAAACGCAATCCTCAAACAGTATGGAGTT 1925
Query 1729 GAATTCACTTCAGAACACGTGCTTCCCCTGATTATACCGCTTCTCACTGCCCAACAATTG 1788
|||||||| ||||||| |||||| ||||||| || ||||||||||||||||||||| ||
Sbjct 1926 GAATTCACAGCAGAACATGTGCTTACCCTGATGATGCCGCTTCTCACTGCCCAACAACTG 1985
Query 1789 AATGTCCAACAGTTTGCCAAATATATTCTATTTGTCAAGGATATTCTCAGGAAAATAGAG 1848
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1986 AACGTCCAACAGTTTGCCAAATATATGCTATTTGTCAAGGATATTCTCAGGAAAATAGAG 2045
Query 1849 GAAAAAAGAGGAGTTACAGTAAATGATTCTGGAGTCCCAGAAGTAAAACCAGGC-T-CTG 1906
|||||||||||||| ||||| || ||||| ||||||||||| || ||||| | | | |||
Sbjct 2046 GAAAAAAGAGGAGTAACAGTGAACGATTCCGGAGTCCCAGAGGTGAAACC-G-CATTCTG 2103
Query 1907 TTGCGGATGGGCTTCAGTTTCAAACATCAACCCAAAAAACTGAAAAGGTTGCTTCTGCAG 1966
||| |||| || |||||||| |||||||||||| | |||| ||||||||||||||||
Sbjct 2104 CTGCCAATGGACTCCAGTTTCAGTCATCAACCCAAATACCTGAGAAGGTTGCTTCTGCAG 2163
Query 1967 CAAAGAACAGTCCTGCATGGGATGAAGATTGGGCCCTTCC-GACCAA-GATTTCTGCTCC 2024
| |||| |||||||||||||||||||||||||| | | || || ||| |||| |||||
Sbjct 2164 CCAAGAGCAGTCCTGCATGGGATGAAGATTGGGGC-TCCCCGAGCAAAGATT-CTGCTG- 2220
Query 2025 TAG-AGATCCTGAA-C--C-CA-CA-AACTC------TCAGTTTAACAGTTCTACAGTTC 2071
| | | |||||| | | | || ||| | ||||||||||| || |||| ||
Sbjct 2221 TGGGAAATCCTGCTTCTTCTCGTCATAACACAAACGATCAGTTTAACAAATCCACAGATC 2280
Query 2072 AGTCACAGTCATCGA--A---C--C---G--------GACATCAGTACCAACAACATGCC 2113
|||||||| |||||| | | | | |||| ||| |||||||||||||
Sbjct 2281 AGTCACAGCCATCGATCATGTCTACTCTGCCCAACAAGACAACAGCGCCAACAACATGCC 2340
Query 2114 CTGCAGTTGACCTAGAGTGGCCTCCAAGACAATCTTCCAGTGC-CACTGCTC-AGCCAGC 2171
||||||| ||| | |||||||||||||| |||||||| || | |||||||| ||| | |
Sbjct 2341 CTGCAGTGGACATCGAGTGGCCTCCAAGGCAATCTTCAAGC-CTCACTGCTCCAGCAA-C 2398
Query 2172 TAATGATGAGACACGGA-TAAACGAAGCAGGAACATCATCAACTCCAAGTTTTGATGAAC 2230
| || || |||||| | ||||| | |||||||||||| || | |||| |||||
Sbjct 2399 TGATAATCAGACACA-ACTAAAC-A--CAGGAACATCATTTGCTTCGGGTTTCGATGAGT 2454
Query 2231 TAGACCCTTTTGCTAACTGGCCACCACGGCCCAAC 2265
|||| || |||||||| ||||| ||||| ||||||
Sbjct 2455 TAGATCCGTTTGCTAATTGGCCTCCACGTCCCAAC 2489
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136052749416
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5