BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472551
Length=2036
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23010.1 | Symbols: LPR1 | Cupredoxin superfamily protein | ... 2922 0.0
AT1G71040.1 | Symbols: LPR2 | Cupredoxin superfamily protein | ... 913 0.0
> AT1G23010.1 | Symbols: LPR1 | Cupredoxin superfamily protein
| chr1:8147264-8149813 FORWARD LENGTH=2068
Length=2068
Score = 2922 bits (1582), Expect = 0.0
Identities = 1876/2017 (93%), Gaps = 24/2017 (1%)
Strand=Plus/Plus
Query 37 ACACACACTCAAAA-TTAACTTGACTTGTCAGAAATGGAATCTCTGTTGTGTCGGAGGAT 95
|||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct 57 ACACACACTCAAAACTGAA-TTGACTTGTCAGAAATGGAATCTCTGTTGTGTCGGAGGAG 115
Query 96 GATGAAGAGAGTCATGGTGCTAATAATAACGTTGACATGGCTCGGTGGCACGTGCGGAGA 155
||| |||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 116 GATAAAGAGAGTCATGGTGCTAATAATAGCGTTGACATGGCTCCGTAGCACGTGCGGAGA 175
Query 156 GCTCGAGGACCAACTATTCGAAGTAGGAAAGCTTAAGATGTTCGTCGACGACCTCCCAGA 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 GCTCGAGGACCAACTATTCGAAGTAGGAAAGCTTAAGATGTTCGTCGACGACCTCCCAGA 235
Query 216 TATGCCTAGACTCTATGGCTTTAACTCTGTTCATGATATCATCAAACCCA-CTTCTCTTC 274
|||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct 236 TATGCCCAGACTCTATGGCTTTAACTCTGTTCATGGTATCATCAAACC-AGCTTCTCTTC 294
Query 275 AAATCGGCATGTTCTCCACTAAATGGAAATTCCATAGAGATTTGCCTGCGACGCCTGTGT 334
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 295 AAATCGGCATGTTCTCCACTAAATGGAAATTCCACAGAGATTTGCCTGCGACGCCAGTGT 354
Query 335 TTGCGTATGGTACATCACGGAGCAAGGCAACGGTTCCTGGTCCGACGATCGAAGCTGTTT 394
|||| || ||||||||||||||||||||||| ||||||||||||||||| ||| | || |
Sbjct 355 TTGCATACGGTACATCACGGAGCAAGGCAACAGTTCCTGGTCCGACGATTGAAACCGTAT 414
Query 395 ATGGAGTAGACACATACGTTACATGGCGAAATCACCTTCCTTCATCTCACATCCTTCCTT 454
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 415 ATGGAGTAGACACATACGTTACGTGGCGAAATCACCTTCCTAAATCTCACATCCTTCCTT 474
Query 455 GGGACCCTACAATTTCCCCTGCAACTCCAAAACACGGTGGAATTCCTACGGTTGTTCACT 514
||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 475 GGGACCCCACAATCTCCCCAGCAACTCCGAAACACGGTGGAATTCCTACGGTTGTTCACT 534
Query 515 TACATGGTGGAATCCACGAACCAACAAGTGATGGAAATGCCGACGCATGGTTCACTGCCG 574
||||||| |||||||||||||||||||| || ||||| |||||||| |||||||||||||
Sbjct 535 TACATGGAGGAATCCACGAACCAACAAGCGACGGAAACGCCGACGCGTGGTTCACTGCCG 594
Query 575 GTTTTAGAGAGACAGGACCAAAATGGACCAAAACGACGTTGCATTACGAGAATAAGCAAC 634
|||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 595 GTTTCAGAGAAACAGGACCAAAATGGACCAAAACGACGTTACATTACGAGAACAAGCAAC 654
Query 635 AACCTGGTAACATGTGGTACCATGACCATGCCATGGGTTTGACCCGAGTCAACCTCCTCG 694
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 655 AACCTGGTAACATGTGGTACCATGACCATGCCATGGGTTTGACTCGAGTCAACCTCCTTG 714
Query 695 CCGGTTTGGTTGGTGCCTATATTCTTCGCCACCACGCCGTAGAATCTCCGTTGCAGCTAC 754
|||||||||| || |||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 715 CCGGTTTGGTAGGCGCCTATATTCTTCGCCACCACGCCGTTGAATCTCCCTTTCAGCTAC 774
Query 755 CCACTGGCGATGAATTCGACCGACCGTTGATCATTTTTGATCGAAGCTTCCGTAAAGACG 814
| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 775 CTACTGGCGATGAGTTCGACCGACCGTTGATCATTTTTGATCGTAGCTTTCGTAAAGACG 834
Query 815 GGTCAATTTACATGAACGCGACTGGGAACAACCCATCGATTCACCCGCAATGGCAACCGG 874
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 835 GGTCAATTTACATGAACGCCACTGGGAACAACCCATCGATTCACCCGCAGTGGCAACCGG 894
Query 875 AATACTTTGGCGATGTGATAATCGTTAATGGAAAAGCATGGCCACGATTAAACGTCCGAC 934
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 895 AATATTTTGGCGATGTGATAATCGTTAATGGAAAAGCATGGCCAAGATTAAACGTCCGAC 954
Query 935 GTAGGAAATACAGATTCCGTATCATAAACGCAAGCAACGCTAGATTTTTCAAATTTTTCT 994
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 955 GTAGGAAATACAGATTCCGTATCATAAACGCAAGCAACGCTAGGTTTTTCAAGTTTTTCT 1014
Query 995 TCTCCAACGGTCTAAATTTCATCGTTGTGGGTTCTGATTCGGCGTATTTGTCAAAACCGG 1054
|||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1015 TCTCCAACGGTCTAGATTTCATCGTTGTGGGGTCTGATTCAGCGTATTTGTCAAAGCCGG 1074
Query 1055 TGATGACCAAATCGATTCTCTTATCTCCGTCAGAAATTGTAGACGTCATCGTTGATTTCT 1114
|||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 1075 TGATGACCAAATCGATTCTCTTATCTCCATCAGAAATTGTAGACGTTGTTGTTGATTTCT 1134
Query 1115 -CGAAATCACCATCGAGAACCGTGGTACTCGCTAACGACGCGCCGTATCCTTATCCTAGT 1173
| |||||||| |||||||| ||||| || ||||| ||||| || |||||||| ||||||
Sbjct 1135 AC-AAATCACCGTCGAGAACGGTGGTGCTTGCTAATGACGCACCATATCCTTACCCTAGT 1193
Query 1174 GGTGATCCGGTCAACGAAGAAAATGGCAAGGTAATGAAATTTATCATCAACAACGAA-CG 1232
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 1194 GGTGATCCTGTCAACGAAGAAAATGGCAAGGTAATGAAATTTATCATCAACAATGAATC- 1252
Query 1233 AGAGGATGACTCATGTACAATTCCCAAGAAGCTCATCAACTACCCGCATGCTGACTTGTC 1292
|||||||||| |||||||||||||||||||||||||||| || ||| |||||||| ||||
Sbjct 1253 AGAGGATGACACATGTACAATTCCCAAGAAGCTCATCAATTATCCGAATGCTGACGTGTC 1312
Query 1293 AAACGCGGTACTCAGGCGTTACATCTCTATGTACGAGTACGTGAGCAACTCTGATGAACC 1352
|||||| || |||| |||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 1313 AAACGCCGTTCTCACGCGTTACATCTCTATGTACGAGTATGTGAGTAACTCTGATGAGCC 1372
Query 1353 AACTCATTTGCTAGTCAACGGCTTACCCTATGATGCTCCTGTCACAGAAACTCCAAAATC 1412
|||||||||| ||||||| || || |||||||| ||||| || |||||||||||||||||
Sbjct 1373 AACTCATTTGTTAGTCAATGGTTTGCCCTATGAAGCTCCCGTTACAGAAACTCCAAAATC 1432
Query 1413 AGGAACCACCGAGGCGTGGGAAGTGATAAATTTGACGGAGGATAACCATCCGTTACACAT 1472
||| || || |||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1433 AGGGACTACAGAGGTATGGGAAGTGATAAATTTGACGGAAGATAACCATCCGTTACACAT 1492
Query 1473 TCATCTAGGATTGTTCAAAGTGGTAGAGCAAACGGCATTACTGGCGGCGGGATTGGAGGA 1532
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1493 TCATCTAGGATTGTTCAAAGTGGTAGAGCAAACGGCATTACTGGCGGCAGGATTGGAGGA 1552
Query 1533 GTTCAAGGAATGTATGACGAAACAAAACGACGCGGTCAAGTGCCAAATCAGCAAATACGC 1592
||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1553 GTTCAAGGAGTGTATGACGAAACAAAACGACGCGGTCAAGTGTCAAATTAGCAAATACGC 1612
Query 1593 TCGTGGGAAAAAGACGGCAGTGACGGCACACGAGAGGGGTTGGAAGAACGTATTCAAGAT 1652
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1613 TCGTGGGAAAAAGACAGCGGTGACGGCACACGAGAGGGGTTGGAAGAACGTATTCAAGAT 1672
Query 1653 GATGCCGGGACATGTTACGAGGATACTCGTCCGCTTTTCGTATATCCACACTAACGCATC 1712
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1673 GATGCCGGGACATGTTACGAGGATACTTGTCCGCTTTTCTTATATCCACACTAATGCATC 1732
Query 1713 GTACCCATTCGATCCGACCCTAG-AACCTGGCTATGTCTACCATTGTCACATATTGGACC 1771
||||||||||||||||| | || |||| |||||||||||||||||||||||||||||||
Sbjct 1733 TTACCCATTCGATCCGACTC-AGGAACCGGGCTATGTCTACCATTGTCACATATTGGACC 1791
Query 1772 ATGAGGACAATATGATGATGAGGCCGCTTAAAGTCATCAATTGATATTTCAGGGTCTATT 1831
||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||| |
Sbjct 1792 ATGAGGACAATATGATGATGAGGCCGCTTAAGGTCATCATTTGATATGTCAAGGTCTAAT 1851
Query 1832 GATC--TC-C-GCGAAGTTTTTGATGGTGCAAAAAGATAAAAACTAATCAGACA--A-A- 1883
|||| || | |||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct 1852 GATCGATCTCTGCGAAGTTTT-GATGGTGCAAAAAGATAAAAACTAATCAGACATCATAA 1910
Query 1884 --TGAAAC-CACATATTGAGAATGTAACATAGTCTTTACTTTGTTAATTCCTAGTAAGAA 1940
|||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1911 AATGAAACTC-CATATTGAGAATGTAACATAGTCTTTACTTTAATAATTCCTAGTAGGAA 1969
Query 1941 TTCCAAAATTTAGTACTGGCTT-TGTTGAAAGAACCATTCTTTCCTGAATTTGTTATGAA 1999
||| |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 1970 TTCTAAAATTTAGTACTGGCTTATGTTGAAAGAACCATTCTTTCCTGATTTTATTATGAG 2029
Query 2000 TCCAAATTCAGAAATAATAAGTATTCTCTAAATTGAT 2036
||||||||||||||||||||||| |||||||||||||
Sbjct 2030 TCCAAATTCAGAAATAATAAGTACTCTCTAAATTGAT 2066
Score = 76.8 bits (41), Expect = 7e-13
Identities = 43/44 (98%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 1 AATCTCTCTCACCCGAAGTTAATAATTCAGTCAGAAACACACAC 44
||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AATTTCTCTCACCCGAAGTTAATAATTCAGTCAGAAACACACAC 44
> AT1G71040.1 | Symbols: LPR2 | Cupredoxin superfamily protein
| chr1:26796966-26800322 REVERSE LENGTH=2079
Length=2079
Score = 913 bits (494), Expect = 0.0
Identities = 1290/1663 (78%), Gaps = 99/1663 (6%)
Strand=Plus/Plus
Query 184 AAGCTTAAGATGTTCGTCGACGACCTCCCAGATATGCCTAGAC-TCTATGGCTTTAAC-T 241
|||||| |||||||||| ||| | || || |||| || | || || |||||| || |
Sbjct 219 AAGCTTGAGATGTTCGTTGACAAGCTTCCTCATATACCAACACTTC-ATGGCTACCACTT 277
Query 242 CTGTTC-AT-GATATCATCAAACCCACTTCTCTTCAAATCGGCATGTTCTCCACTAAATG 299
| | || || | | || ||||||||| |||||||| || |||||||||| || |||||
Sbjct 278 C-G-TCAATGGCT-TCCTCAAACCCAAATCTCTTCACATAGGCATGTTCTTCAAGAAATG 334
Query 300 GAAATTCCATAGAGATTTGCCTGCGACGCCTGTGTTTGCGTATGGTACATC-ACG-GAGC 357
||||||||| ||||| |||||||| ||||| ||||| || ||||||||||| | | | |
Sbjct 335 GAAATTCCACAGAGACTTGCCTGCCACGCCAGTGTTCGCATATGGTACATCAAAGCGTTC 394
Query 358 AAGGCAACGGTTCCTGGTCCGACGATCGAAGCTGTTTATGGAGTAGACACATACGTTACA 417
| ||||| |||||||| || || || |||||||||||||| || ||||| ||||| ||
Sbjct 395 -A-GCAACAGTTCCTGGACCAACAATAGAAGCTGTTTATGGCGTCGACACCTACGTGACG 452
Query 418 TGGCGAAATCACCTTCCTTCATC-TCACATCCTTCCTTGGGACCCTACAATTTCCCCTGC 476
|||||||||||||| |||| | | ||| ||||| ||||||||||| ||||| || || ||
Sbjct 453 TGGCGAAATCACCTCCCTTTA-CATCATATCCTCCCTTGGGACCCAACAATCTCTCCGGC 511
Query 477 AACT-CCAAAACACGGTGGAATTCCTACGGTTGTTCACTTACATGGTGGAATCCACGAAC 535
|| | || |||||||| || ||||| ||||| |||||||| || || || ||||||||||
Sbjct 512 AA-TCCCTAAACACGGCGGCATTCCCACGGTGGTTCACTTGCACGGAGGTATCCACGAAC 570
Query 536 CAACAAGTGATGGAAATGCCGACGCATGGTTCACTGCCGGTTTTAGAGAGACAGG-ACCA 594
|||| || ||||||||||| || |||||||||| || ||||| | ||| || || ||
Sbjct 571 CAACTAGCGATGGAAATGCAGATTCATGGTTCACCGCTGGTTTCAAAGAAACTGGTTCC- 629
Query 595 AAATGGACCAAAACGACGT-TGCATTACGAGAATAAGCAACAACCTGGTAACATGTGGTA 653
||||||||||||| ||| | ||||||| || |||||||||||||| |||||||||||
Sbjct 630 AAATGGACCAAAAAGAC-TACACATTACGTCAACAAGCAACAACCTGGAAACATGTGGTA 688
Query 654 CCATGACCATGC--CATGGGTTTGACCCGAGTCAACCTCCTCGCCGGTTTGGTT-GG-TG 709
||||||||| || || ||| |||||| |||||||||| || |||||||| ||| || |
Sbjct 689 CCATGACCACGCGGCA-GGG-TTGACCAGAGTCAACCTTCTTGCCGGTTT-GTTAGGCT- 744
Query 710 CCTATATTCTTCGCCACCACGC-C-GTAGAATCTCCGT-TGCAGCTACCCACTGG-CGAT 765
| || ||||| || || | || | || ||||| || | | | | |||| || || ||
Sbjct 745 CTTACATTCTCCGTCA-TA-GCTCAGTCGAATCGCC-TCTTCGGTTACCTACCGGACG-C 800
Query 766 GAATTCGACCGACCGTTGATCATTTTTGATCGAAGC-TTCCGTAAAGACGGGTCAATTTA 824
|||||||| || || ||| |||| ||||| || | | || |||||||| || || |||||
Sbjct 801 GAATTCGATCGTCCTTTGGTCATCTTTGACCG-ATCTTTTCGTAAAGATGGTTCCATTTA 859
Query 825 CATGAACGCGACTGGGAACAACCCATCGATTCACCCGCAATGGCAACCGGAATACTTT-G 883
||||||||| || |||||||| ||| ||||||| || |||||||| || || || ||| |
Sbjct 860 CATGAACGCTACAGGGAACAATCCAACGATTCATCCACAATGGCAGCCAGAGTA-TTTCG 918
Query 884 GCGATGTGATAATCGTTAATGGAAAAGCATGGCC-ACGATTAAACGTCCGACGTAGGAAA 942
|||| | || || || || || ||||||||||| | |||||| |||||| || |||||
Sbjct 919 GCGACGCCATCATTGTGAACGGTAAAGCATGGCCGA-GATTAACCGTCCGCCGCCGGAAA 977
Query 943 TACAGATTCCGTATCATAAACGCAAGCAACGCTAGATTTTTCAAATTTTTCTTCTCCAAC 1002
|| ||||| || |||| |||||| || ||||| || || ||| || ||||||||||||
Sbjct 978 TATAGATTTCGAATCACAAACGCTAGTAACGCAAGGTTCTTCCGGTTCTTCTTCTCCAAC 1037
Query 1003 GGTCTAAATTTCATCGTTGTGGGTTCTGATTCGGCGTAT-TTGTCAAAACCGGTGAT-GA 1060
||||| | ||||| || || ||||| ||||| || ||| | | | ||||| || || ||
Sbjct 1038 GGTCTCGACTTCATTGTCGTTGGTTCCGATTCCGCTTATCTAG-CGAAACCAGT-ATCGA 1095
Query 1061 CCAAATC-GATTCTCTTATCTCCGTCAGAAATTGTAGACGTCA-TCGTTGA-TTTCTCGA 1117
||||||| | ||||| || ||||||| || ||||| ||||| | ||||||| ||| || |
Sbjct 1096 CCAAATCTG-TTCTCCTAGCTCCGTCGGAGATTGTCGACGT-ACTCGTTGACTTT-TC-A 1151
Query 1118 AA-TCACCATCGAGAACCGTGGTACTCGCTAACGACGCGCCGTATCCTTATCC-TAGTGG 1175
|| ||| |||||| ||| | | || || ||| | || || |||||||| || | | ||
Sbjct 1152 AAGTCAACATCGAAAACGGCAATTCTTGCCAACAATGCACCTTATCCTTACCCGTCG-GG 1210
Query 1176 TGATCCGGTCAAC-GAAGAAAATGGCAAGGTAATGAAATTTATCATCAACAACGAA-CGA 1233
||||| ||| || ||||| || |||| || ||||| ||||| |||||| || || | |
Sbjct 1211 AGATCCCGTC-ACGGAAGAGAACAGCAAAGTCATGAAGTTTATAATCAACTACAAATC-A 1268
Query 1234 GAGGATGACTCAT-GTACAATTCCCAAGAAGCTCA-TCAACTACCCGCATGCTGACT-TG 1290
|| | |||| | | | | ||||| |||||||| | | || ||||| | |||| | | |
Sbjct 1269 GAAGTTGACACGTCG-ATTATTCCGAAGAAGCTAATTGAA-TACCCTCCTGCTCA-TGTA 1325
Query 1291 TCAAACGCGGTAC-TCAGGCGTTACATCT-CTATGTACGAGTACGTGAGCAA-C-TCTGA 1346
|||| | | || | | |||||||| | |||||| |||||| ||| ||| | | |||
Sbjct 1326 TCAACCTCCACACGT-ACACGTTACAT-TGCTATGTTCGAGTATGTG-TCAAGCAT-TGA 1381
Query 1347 TGAACCAACTCAT-T-TGCTAGTCAACGGCT-TACCCTATGATGCTCCTGTCACAGAAAC 1403
|| ||||| ||| | | | | ||||||| | | || || | ||||| || || |||||
Sbjct 1382 CGAGCCAACACATCTATAC-A-TCAACGG-TCTGCCTTACAACGCTCCCGTAACCGAAAC 1438
Query 1404 TCC-AAAATCAGGAACCACCGAGGCGTGGGAAGTGATAAATTTGACGGAGGATAACCATC 1462
||| |||||| || || | ||||| ||||||||||||||| || || |||||||||||||
Sbjct 1439 TCCAAAAATC-GGCACAAGCGAGGTGTGGGAAGTGATAAACTTAACCGAGGATAACCATC 1497
Query 1463 CGTTACACATTCATC-TAGGATTGTTCAAAGTGGTAGAGCAAACGGCATTACTGGCGGCG 1521
|||| |||||||| | | |||||||| ||||| | |||||||||||| | ||| |
Sbjct 1498 CGTTGCACATTCA-CTTGGGATTGTTTAAAGTATTGGAGCAAACGGCA-T--TGG-TG-A 1551
Query 1522 GGATTGGAGGAGTTCA-AGGAATGTATGACGAAACA-AAACGACGCGGTCAAGTGCCAAA 1579
|| | |||||||||| | || || ||||| ||| | |||||| || |||||||| | |
Sbjct 1552 AGAGT-GAGGAGTTCATA-GAGTGCATGACTAAA-AGAAACGATGCCGTCAAGTGTGAGA 1608
Query 1580 TCAGCAAATACGCTCGTGGGAAAAAGACGGCAGTGACGGCACACGAGAGGGGTTGGAAGA 1639
| ||||||||||| || ||||| ||||| || || |||| ||||||| |||| ||||| |
Sbjct 1609 TTAGCAAATACGCACGAGGGAACAAGACCGCGGTTACGGTACACGAGCGGGGATGGAAAA 1668
Query 1640 ACGTATTCAAGATGATGCCGGGACATGTTACGAGGATACTCGTCCGCTTTTCGTATATCC 1699
|||||||||||||||||||||||||||| |||| ||||||||| | ||||| || || |
Sbjct 1669 ACGTATTCAAGATGATGCCGGGACATGTAACGAAGATACTCGTTAGATTTTCTTACATTC 1728
Query 1700 ACACTAACGCATCGTAC-CCATTCGATC-CGACCCTAGAACCTGGCTATGTCTACCATTG 1757
|| | |||| ||| ||| || || || | | || | ||| || |||||||| ||||| ||
Sbjct 1729 ACTCAAACGAATCTTACTCCTTT-GA-CGCAACTCAAGAGCCAGGCTATGTTTACCACTG 1786
Query 1758 TCACATATTGGACCATGAGGACAATATGATGATGAGGCCGCTT 1800
|||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1787 TCACATATTGGACCATGAAGACAATATGATGATGAGGCC-CTT 1828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100903095450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5