BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472553
Length=2182
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1... 3434 0.0
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1... 1153 0.0
> AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:8156646-8159077
FORWARD LENGTH=2173
Length=2173
Score = 3434 bits (1859), Expect = 0.0
Identities = 2079/2184 (95%), Gaps = 19/2184 (1%)
Strand=Plus/Plus
Query 1 CTTCTGAGTAAAGAACGAATCCCAAAGCTCatttattcttttcttttgtattattctttc 60
|||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1 CTTCTGAGTAAAGAACCAATCCCAAAGCTCATTTATTCTTTCCTTTTCAATTATTCTTTC 60
Query 61 aatttttttCCGATTGACGGAGGTTGGTCGGCGACGGCGTAATGGCCGGAGGAATCGTTT 120
|| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 61 AA--TTTTTCCGATCGACGGAGGTTGATCGGCGACGGCGTAATGGCCGGAGGAATCGTCT 118
Query 121 CACCCGCCACTCTACTCGACCTAATCACCGATATCGTCGAGATTCCACTCAACGCCGGCA 180
|||| ||| ||||||||||||||||| | |||||||||||||||||||||||| |||| |
Sbjct 119 CACCGGCCTCTCTACTCGACCTAATCGCTGATATCGTCGAGATTCCACTCAACACCGGAA 178
Query 181 TTTTCAAGAAGGATTGCGCGGATCTCACTCGACGAGTCTGTCTCTTGACGCATTTGTTAG 240
| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 179 TGTTCAAGAAGGATTGCGCAGATCTCACTCGACGAGTTTGTCTCTTAACGCATTTGTTAG 238
Query 241 AAGAGATTAGAGACTCAACTCCGATCGATTCCGCTGCTTCGTCGTCGTCGGAAAATGACT 300
| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| |
Sbjct 239 AGGAGATTAGAGACTCAACTCCTATCGATTCCGCCGCTTCGTCGTCGTCGGAGAATGATT 298
Query 301 GGTGGTCTGATCTTGTGG-CGGGACTTCAAGCCGCGAAGCGTCTTCTCTCCACAGCTCGA 359
||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 299 GGTGGTCTGATCTCGTGGTC-GGACTTCAAGCCGCGAAGCGTCTTCTCTCCACAGCTCGA 357
Query 360 TTCCAAGCTCGCGATTCCTCTGATGGTGCTGCGAAGAGAATCTCATTCCAGTTCCAATGT 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 358 TTCCAAGCTCGCGATTCCTCTGATGGTGCTGCGAAGAGAATCTCATTTCAGTTCCAATGT 417
Query 420 GTTACATGGAAGCTTGAGAAAGCATTGAGCAATCTTCCATATGATCTTTATGATATCTCT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 GTTACATGGAAGCTTGAGAAAGCATTGAGCAATCTTCCATATGATCTTTATGATATCTCT 477
Query 480 GACGAAGTTGGAGAACAAGTGGAGCTAGCGAGATCGCAGTTGCGAAGAGCAATGCAGAGA 539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 478 GACGAAGTTGGAGAACAAGTGGAGCTAGCGAGATCACAGTTGCGAAGAGCAATGCAGAGA 537
Query 540 TATGGATCGTTGAATTCGAATAAGTTCTCGAGTGCTTTATCTGAGCCAATGGAGAGAGAT 599
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 538 TATGGATCGTTGAATTCGAACAAGTTCTCGAGTGCTTTATCTGAGCCAATGGAGAGAGAT 597
Query 600 GGTCTTAGCAATGTTATAAAGATCAAAGCTGAGGAAAAGCTTGAGAGTGTTTCAGAAACA 659
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 GGTTTTAGTAATGTTATAAAGATCAAAGCTGAGGAAAAGCTTGAGAGTGTTTCAGAAACA 657
Query 660 CTTCATTTTGTTGAGGAGGAGGAGAAACAA-GATTCCCCACCTCTAAGGAGAAGCTCTTC 718
|||||||||| ||||||||||||||||||| | ||| || ||||||||||||||||||||
Sbjct 658 CTTCATTTTGGTGAGGAGGAGGAGAAACAAAG-TTCGCCGCCTCTAAGGAGAAGCTCTTC 716
Query 719 CATTTCGTTGGCTTATTATTTGTCCAAGGATGCTGATACCGATAGATTAGACAAAATGGT 778
|||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 717 CATTTCTTTGGCTTATTATTTGTCCAAAGATGCTGATACTGATAGATTAGACAAAATGGT 776
Query 779 TAACAAGAACACTGATGAATCGAAGAAGTCTGATAAACTCACGATTCCGGTTGATTTTCT 838
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 777 TAACAAGAACACTGATGAATCGAAGAAATCTGATAAACTCACGATTCCGGTTGATTTTCT 836
Query 839 TTGTCCGGTGTCGCTGGAACTGATGAAGGATCCAGTTATTGTTGCTACAGGACAGACTTA 898
||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 837 TTGTCCGGTGTCGCTTGAACTGATGAAGGATCCTGTCATTGTTGCCACAGGACAGACTTA 896
Query 899 TGAGAGGGCGTACATACAGAGATGGATCGACTGTGGGAATCTAACATGTCCTAAGACTCA 958
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 CGAGAGGGCATACATACAGAGATGGATCGACTGTGGGAATCTAACATGTCCTAAGACTCA 956
Query 959 GCAGAAACTCGAAAACTTTACGCTTACACCAAACTATGTTCTCAGAAGCCTCATCTCTCG 1018
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 957 GCAGAAACTCGAAAACTTTACGCTTACACCAAACTATGTTCTCAGAAGTCTCATCTCTCG 1016
Query 1019 GTGGTGCACTGAACACAACATTGAGCAACCTGCAGGTTACATTAACGGCAGGTCAAAAAA 1078
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1017 GTGGTGCGCTGAACACAACATTGAGCAACCTGCAGGTTACATTAACGGCAGGACAAAAAA 1076
Query 1079 CAGTGGAGATATGTCGGTGATCCGGGCCTTGGTTCAGAGACTCTCAAGCCGGTCAACAGA 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 CAGTGGAGATATGTCGGTGATCCGGGCCTTGGTTCAGAGACTCTCAAGCCGGTCAACAGA 1136
Query 1139 GGATCGAAGGAATGCGGTTTCTGAAATCCGGTCTCTGTCAAAGAGAAGCACGGACAATCG 1198
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct 1137 GGATCGAAGGAATGCGGTTTCTGAAATCCGCTCTCTGTCAAAGAGAAGTACGGATAATCG 1196
Query 1199 CATTCTGATTGCAGAAGCAGGAGCAATCCCTGTTTTGGTGAACCTTTTAACCTCAGAGGA 1258
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1197 CATTCTGATTGCAGAAGCAGGAGCAATCCCTGTTTTGGTGAATCTTTTAACCTCAGAGGA 1256
Query 1259 CGTTGCAACGCAGGAAAACGCAATTACATGTGTTCTCAACCTCTCTATATATGAGAACAA 1318
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1257 TGTTGCAACGCAGGAAAACGCAATCACATGTGTTCTCAACCTCTCTATATATGAAAACAA 1316
Query 1319 CAAAGAGCTGATAATGTTTGCTGGTGCAGTCACCTCAATCGTTCAAGTCCTTAGAGCCGG 1378
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1317 CAAAGAGCTGATAATGTTTGCTGGTGCAGTCACCTCAATTGTTCAAGTCCTTAGAGCCGG 1376
Query 1379 AACCATGGAAGCAAGAGAAAACGCAGCAGCGACACTTTTTAGCCTTTCGTTAGCCGATGA 1438
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1377 AACCATGGAAGCAAGAGAAAACGCAGCAGCGACACTTTTTAGCCTGTCGTTAGCCGATGA 1436
Query 1439 GAACAAGATCATAATCGGCGGATCGGGTGCGATACCTGCCTTAGTGGATCTGCTTGAAAA 1498
||||||||||||||| ||||| || |||||||||||||||||||| |||||||| || ||
Sbjct 1437 GAACAAGATCATAATAGGCGGGTCAGGTGCGATACCTGCCTTAGTTGATCTGCTCGAGAA 1496
Query 1499 CGGGACCCCGAGAGGGAAGAAAGATGCAGCCACGGCATTGTTCAATCTCTGCATTTATCA 1558
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1497 CGGGACCCCGAGAGGGAAGAAAGATGCAGCAACGGCATTGTTCAATCTCTGCATTTATCA 1556
Query 1559 TGGAAACAAAGGTCGAGCGGTCAGAGCCGGTATAGTAACAGCATTGGTTAAGATGCTGAG 1618
||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1557 TGGAAACAAAGGTAGAGCAGTCAGAGCCGGTATAGTAACTGCATTGGTTAAGATGCTCAG 1616
Query 1619 TGATTCCACCCGCCACCGGATGGTTGATGAAGCTTTGACAATTCTCTCAGTTCTTGCAAA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 TGATTCCACCCGCCACCGGATGGTTGATGAAGCTTTGACAATTCTCTCAGTTCTTGCAAA 1676
Query 1679 TAATCAAGACGCGAAATCCGCGATAGTAAAAGCGAATACTTTACCTGCATTGATAGGTAT 1738
|||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct 1677 TAATCAAGACGCGAAATCCGCGATAGTAAAAGCGAATACTCTACCCGCGTTGATAGGTAT 1736
Query 1739 TCTCCAGACGGATCAAACTAGAAACCGAGAGAATGCAGCAGCGATATTACTGTCTCTGTG 1798
|||||| |||||||||||||||||||||||||| |||||||||||||| || || |||||
Sbjct 1737 TCTCCAAACGGATCAAACTAGAAACCGAGAGAACGCAGCAGCGATATTGCTTTCGCTGTG 1796
Query 1799 TAAGAGAGACACTGAGAAACTGGTCTCTATCGGTAGACTCGGCGCGGTTGTGCCATTGAT 1858
||| |||||||||||||||||| || |||||||||||||||| |||||||| || || ||
Sbjct 1797 TAAAAGAGACACTGAGAAACTGATCACTATCGGTAGACTCGGTGCGGTTGTCCCGTTAAT 1856
Query 1859 GGATCTATCGAAGAATGGAACAGAGAGAGGCAAAAGGAAAGCCATATCTTTGTTAGAGCT 1918
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 GGATTTATCGAAGAATGGAACAGAGAGAGGCAAAAGGAAAGCCATATCTTTGTTAGAGCT 1916
Query 1919 TCTACGTAAAGCATGCCAATAATAACTAGTCTTCTGACaaaaacaaaaaaGGTTCATGAA 1978
||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct 1917 TCTTCGTAAAGCATGCCAATAATAACTAGTCTTCTGACAAAAA-A-----GGTTCATCAA 1970
Query 1979 GCTCTCATTTTTATTGAGTTTATTAAATTATGTTAATATTCTTGTTCAATTGATTTGAtt 2038
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1971 GCTCTCATTTTTATTGAGTTTATTAAATTATGTTAATATTCTTGTTTAATTGATTTGATT 2030
Query 2039 tttttGGGGGATACTAATTCCATTTGTGGAATCGAATTTGAAGATGGTGAGCTAAAATGG 2098
||||| || | | | | ||||||||||||||||| ||||||||||||||| |||||||
Sbjct 2031 TTTTTTGG--A-A-T--T-CCATTTGTGGAATCGAAATTGAAGATGGTGAGCGAAAATGG 2083
Query 2099 TGTTCGAAAATCGAACTCTGTTTTGCTCGCTGTGTATTTATTTGTTACATTTGTAATAAT 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2084 TGTTCGAAAATCGAACTCTGTTTTGCTCGCTGTGTATTTATTTGTTACATTTGTAATAAT 2143
Query 2159 ATTGGAGATGAATGAATAAGTATT 2182
||||||||||||||||||||||||
Sbjct 2144 ATTGGAGATGAATGAATAAGTATT 2167
> AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:26790597-26793175
REVERSE LENGTH=2185
Length=2185
Score = 1153 bits (624), Expect = 0.0
Identities = 1442/1823 (79%), Gaps = 112/1823 (6%)
Strand=Plus/Plus
Query 182 TTTCAAGAAGGATTGCGCGGATCTCACTCGACGAGTCTGTCTCTTGACGCATTTG-TTAG 240
||| ||||||||||| | |||||| | ||||||||| ||||| ||||||||||| || |
Sbjct 152 TTT-AAGAAGGATTGTTCCGATCTCGCGCGACGAGTCGGTCTCCTGACGCATTTGATT-G 209
Query 241 AAGAGATTAGAGACTCAACTCCG--ATC-GATTCCGCTGCTTCGTCGTCGTCGGA----- 292
| || || || || || ||||| || || || | |||||| || |||| | |
Sbjct 210 AGGAAATCAGGGATTCTTCTCCGCCGTCGGAATCTGATGCTTCTTCTTCGTTGAATTCTC 269
Query 293 A--AA--TGACTGGTGGTCTGATCTTGTGGCGGGACTTCAAGCCGCGAAGCGTCTTCTCT 348
| || ||| ||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 270 ATGAATGTGATTGGTGGTCTGATCTTGTGGTGGGACTTCAAGCCGCGAAGCGTCTTTTGT 329
Query 349 CCACAGCT-C--GATTCCAAGCTCGCGATTCCTCTGATGGTGCTGCGAAGAGAATCTCAT 405
| ||||| | | |||||||||||||| ||||||||||| || || ||||| |||||||
Sbjct 330 CTTCAGCTACTAGTTTCCAAGCTCGCGAGTCCTCTGATGGGGCAGCCAAGAGGATCTCAT 389
Query 406 TCCAGTTCCAATGTGTTACATGGAAGCTTGAGAAAGCATTGAGCA-ATCTTC-CATATGA 463
|||||||||||||||||||||||||||| ||||||||||| || || || |||||||
Sbjct 390 TCCAGTTCCAATGTGTTACATGGAAGCTGGAGAAAGCATT-AGGTGAT-TTGACATATGA 447
Query 464 TCTTTATGATATCTCTGACGAAGTTGGAGAACAAGTGGAGCTAGCGAGATCGCAGTTGCG 523
| |||||||||||||||||||| | ||||| ||||| ||||| |||| ||||| |
Sbjct 448 TAGATATGATATCTCTGACGAAGTCCGTGAACAGGTGGAACTAGCAAGATTACAGTTAAG 507
Query 524 AAGAGCAATGCAGAGATATGGATCGTTGAATTCGAATAAGTTCTCGAGTGCTTTATCTGA 583
||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct 508 AAGAGCAATGCAGAGATATGGATCGTTAAATTCGAAGAAGTTCTCGAGTGGTTTATCTGA 567
Query 584 GCCAATGGAGAGAGATGGTCTTAGCAATGTTATAAAGATCAAAGCTGAG-GAAAAGCTTG 642
||||||||||| ||||| || ||| || ||| || |||| | | |||||| |||
Sbjct 568 GCCAATGGAGAAAGATGC-CT---CAA-GTAATA--GA--AAAGTT-ATTGAAAAG-TTG 616
Query 643 -AGAGTGTTTCAGAAACACTTCATT-TTGT-TGAGGAGGAGGAGAAACAAGATTC-CCCA 698
||||| || |||| ||| | |||| || | | || | ||| ||||| || || |||
Sbjct 617 GAGAGTATTCCAGAGACAGTGCATTCTT-TATCAG-ATGAGAAGAAATTTGAATCACCC- 673
Query 699 CCTC-TAAGGA-GAAGCTCTTCCATT-TCGTTGGC-TTATTATTTGTCCAAGGATGCTGA 754
|||| | ||| || ||||||| | | || ||||| || || ||| || ||||||| |||
Sbjct 674 CCTCCTT-GGAAGA-GCTCTTC-AGTATCATTGGCCTTCTT-TTTATCAAAGGATGGTGA 729
Query 755 T-ACCGATAGATTAGACAAAATGGTTAACAAGAACA-CTGATGAATCGA-AGAAGTCTGA 811
| | || |||||||| ||| |||| | |||||| | ||||| || | |||| || ||
Sbjct 730 TGAT-GAGAGATTAGAGAAAGCAGTTACCGAGAACAGC-GATGACTC-ACAGAAATCGGA 786
Query 812 TAAACTCACGATTCCGGTTGATTTTCTTTGTCCGGTGTCGCTGGAACTGATGAAGGATCC 871
||| ||||||||||| | || ||||||||||| | || ||||||||||||||||||||
Sbjct 787 TAATCTCACGATTCCAGAGGACTTTCTTTGTCCAATCTCTCTGGAACTGATGAAGGATCC 846
Query 872 AGTTATTGTTGCTACAGGACAGACTTATGAGAGGGCGTACATACAGAGATGGATCGACTG 931
| ||||||| | ||||||||||| || |||||| ||| ||| ||||||||||| |||||
Sbjct 847 TGCTATTGTTTCCACAGGACAGACATACGAGAGGTCGTTCATTCAGAGATGGATAGACTG 906
Query 932 TGGGAATCTAA-CATGTCCTAAGACTCAGCAGAAACTCGAAAACTTTACGCTTACACCAA 990
||| ||||| | | || || ||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct 907 TGGAAATCTGAGC-TGCCCAAAGACACAGCAGAAACTTGAAAACTTTACTCTTACTCCAA 965
Query 991 ACTATGTTCTCAGAAGCCTCATCTCTCGGTGGTGCACTGAA-CACAACATTGAGCAACCT 1049
||||||| ||||||||||| || |||| |||||||||| || |||||||||||||||||
Sbjct 966 ACTATGTCCTCAGAAGCCTGATATCTCAGTGGTGCACT-AAGCACAACATTGAGCAACCA 1024
Query 1050 GCAGGTTACATTAACGGCAGGTCAAAAAACAGTG--GAGA-TAT--GT---CG--GTG-A 1098
| |||||||| ||||| ||| | |||||||||| | | | | || | ||| |
Sbjct 1025 GGTGGTTACATGAACGGTAGGACCAAAAACAGTGATGGGTCTTTCCGTGATCTAAGTGGA 1084
Query 1099 --T----C--CG----G-GCCTTGGTTCAG-AGACTCTCAAGCCGGTCAA-CAGAGGATC 1143
| | || | || |||||| | | |||||| |||| |||| | || || |
Sbjct 1085 GATATGTCAGCGATCCGAGCATTGGTTT-GTAAACTCTCTAGCCAATCAATC-GAAGACC 1142
Query 1144 GAAGGAATGCGGTTTCTGAAATCCGGTCTCTGTCAAAGAGAAGCACGGACAATCGCATTC 1203
| |||| |||||||||||||||||| ||||||||||| |||||||| ||||| || ||||
Sbjct 1143 GCAGGACTGCGGTTTCTGAAATCCGCTCTCTGTCAAAAAGAAGCACAGACAACCGAATTC 1202
Query 1204 TGATTGCAGAAGCAGGAGCAATCCCTGTTTTGGTGAACCTTTTAACCTCAGA-GG--ACG 1260
|||||||||| |||||||| |||||||||||||| || ||||| |||||||| || ||
Sbjct 1203 TGATTGCAGAGGCAGGAGCCATCCCTGTTTTGGTCAAGCTTTTGACCTCAGATGGTGACA 1262
Query 1261 TTGCAACGCAGGAAAACGCAATTACATGTGTTCTCAACCTCTCTATATATGAGA-ACAAC 1319
|| |||||||||||| || | || || |||| |||||||| ||||| || | |||||
Sbjct 1263 CTGAAACGCAGGAAAATGCTGTCACTTGCATTCTTAACCTCTCCATATACGA-ACACAAC 1321
Query 1320 AAAGAGCTGATAATGTTTGCTGGTGCAGTCACCTCAATCGTTCAAGTCCTTAGAGCCGGA 1379
||||| ||||| ||| |||| || |||||||| || || || | |||||| |||| |||
Sbjct 1322 AAAGAACTGATCATGCTTGCAGGAGCAGTCACATCTATAGTGCTAGTCCTCCGAGCTGGA 1381
Query 1380 ACCATGGAAGCAAGAGAAAACGCAGCAGCGACACTTTTTAGCCTTTCGTTAGCCGATGAG 1439
| ||||||||| ||||||||||| ||||| || || ||||| ||||||||||| ||||||
Sbjct 1382 AGCATGGAAGCTAGAGAAAACGCTGCAGCTACTCTCTTTAGTCTTTCGTTAGCTGATGAG 1441
Query 1440 AACAAGATCATAATCGGCGGATCGGGTGCGATACCTG-CCTTAGTGGATCTGCTTGAAAA 1498
||||||||||| || |||| ||| ||||||||| || ||||||||||||||||| || |
Sbjct 1442 AACAAGATCATTATAGGCGCATCAGGTGCGATAA-TGGCCTTAGTGGATCTGCTTCAATA 1500
Query 1499 CGGGACCC-CGAGAGGGAAGAAAGATGCAGCCACGGCAT-TGTTCAATCTC-TGCATTTA 1555
|| | | | |||||||||||||| ||||| ||||| | ||||||| || || |||||
Sbjct 1501 TGGAAGCGTC-AGAGGGAAGAAAGACGCAGCTACGGC-TCTGTTCAA-CTTGTGTATTTA 1557
Query 1556 TCATGGAAACAAAGGTC-GAGCGGTCAGAGCCGGTATAGTAACAGC-ATTGGTTAAGATG 1613
|| ||||||||||| | |||| || |||||||||||||||| ||| |||||| || |||
Sbjct 1558 CCAGGGAAACAAAGG-CAGAGCAGTTAGAGCCGGTATAGTAA-AGCCATTGGTGAAAATG 1615
Query 1614 CTGAGTGATTCCACCCGCCACCGGATGGTTGATGAAGCTTTGACAATTCTCTCAGTTCTT 1673
|||| || ||| | || | |||||| ||||||||| ||||| || ||||| |||||
Sbjct 1616 CTGACAGACTCCTCGAGCGAGAGGATGGCTGATGAAGCCTTGACCATACTCTCGGTTCTA 1675
Query 1674 GCAAATAATCAAGACGCGAAATCCGCGATAGTAAAAGCGAATACTTTACCTGCATTGATA 1733
|| | ||| |||| ||||||| | ||||| | | ||| || | |||| | ||||||
Sbjct 1676 GCTAGTAACCAAGTCGCGAAAACTGCGATTTTGAGAGCCAACGCAATACCACCTTTGATA 1735
Query 1734 GGTAT-TCTCCAGACGGATCAAACTAGAAACCGAGAGAATGCAGCAGCGATATTACTGTC 1792
| | | |||||||| ||||||| | ||||||||||||| ||||| |||||| ||||||
Sbjct 1736 GAT-TGTCTCCAGAAGGATCAACCGCGAAACCGAGAGAACGCAGCTGCGATACTACTGTG 1794
Query 1793 TCTGTGTAAGAGAGACACTGAGAAACTGGTCTCTATCGGTAGACTCGGCGCGGTTGTGCC 1852
||| || |||||||| ||||| |||||| |||| || |||||||| || || ||||| ||
Sbjct 1795 TCTTTGCAAGAGAGATACTGAAAAACTGATCTCCATTGGTAGACTTGGAGCTGTTGTTCC 1854
Query 1853 ATTGATGGATCTATCGAAGA-ATGGAACAGAGAGAGGCAAAAGGAAA-GCCATAT-CTTT 1909
||||||||| ||||| |||| | || |||||||||| | ||| |||| || | || ||||
Sbjct 1855 ATTGATGGAACTATC-AAGAGACGGTACAGAGAGAG-CTAAACGAAAAGCTA-ATTCTTT 1911
Query 1910 GTTAGAGCTTCTACGTAAAGCAT 1932
|||||||||| |||||| |||
Sbjct 1912 ACTAGAGCTTCTCCGTAAATCAT 1934
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108232375020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5