BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472583 Length=868 Score E Sequences producing significant alignments: (Bits) Value AT1G23240.1 | Symbols: | Caleosin-related family protein | chr... 1114 0.0 AT1G23250.1 | Symbols: | Caleosin-related family protein | chr... 532 2e-150 > AT1G23240.1 | Symbols: | Caleosin-related family protein | chr1:8252715-8254625 REVERSE LENGTH=943 Length=943 Score = 1114 bits (603), Expect = 0.0 Identities = 807/897 (90%), Gaps = 47/897 (5%) Strand=Plus/Plus Query 2 ATCCTAAACTAATAAGAAAGATTGTGATAATTTCAGTGTTCTGA--GTCATCTCCAATCT 59 |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||| Sbjct 58 ATCCTAAACTAATAAGAAAGCTTGTGATAATTTCAGTGTTCTCACTCTCATCTCCAATCT 117 Query 60 CTGATATATTTCTCATGTCTCATCAGGCAGTAGAGCTA---T-T-A-TCTGTTTCTCCCA 113 ||||||||||||||||||||||||| |||||| |||| | | | || ||||| | Sbjct 118 GTGATATATTTCTCATGTCTCATCAGACAGTAGCGCTAGCCTCTAAGGCTAAGTCTCCTA 177 Query 114 AATCCAAAGGTAAAGGAGGAAAATCAGATAA-GAAAGAATTGACTGCATTGGAGAAACAT 172 || || | ||| ||||||| | |||||| |||| || |||||||||||||||||||| Sbjct 178 AA-CC-CA---AAA-GAGGAAAGTTAGATAAGGAAA-AAATGACTGCATTGGAGAAACAT 230 Query 173 GTGTCCTTCTTCGACAGGAACAAAGACGGCACCGTTTATCCATGGGAAACCTACCAAGGA 232 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 GTTTCCTTCTTCGACAGGAACAAAGACGGCACCGTTTATCCATGGGAAACCTACCAAGGA 290 Query 233 TTTAGAGCGCTTGGGACAGGGCGTCTTTTGGCGGCTTTTGTTGCTATCTTCATCAACATG 292 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 291 TTTAGAGCGCTCGGGACAGGGCGTCTTTTGGCGGCTTTTGTTGCTATATTCATCAACATG 350 Query 293 GGACTCAGCCAA-AAAACTCGTCCGGGAAAGAGATTTTCGCCGTTGTTTCCAATAGACGT 351 |||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 351 GGACTCAG-CAAGAAAACTCGTCCGGGAAAGGGATTCTCGCCGTTGTTTCCAATAGACGT 409 Query 352 GAAGAATAGTCACCTTTGCATGCACGGTAGTGACACCGACGTCTACGACGATGACGGAAG 411 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 410 GAAGAATAGTCACCTTTGCATGCACGGTAGTGACACCGACGTCTATGACGATGACGGAAG 469 Query 412 ATTTGTGGAATCAAAATTCGAGGAGATATTCAAGAAGCATGCTCGCACACATAAAGGTGC 471 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct 470 ATTTGTGGAATCAAAATTCGAGGAAATATTCAACAAGCATGCTCGCACACATAAAGATGC 529 Query 472 TCTCACTGCAGAGGAAATTCAAAAAATGCTTAAGACTAACAGGGATCCTTTCGATATCAC 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 530 TCTCACTGCAGAGGAAATTCAAAAAATGCTTAAGACTAACAGGGATCCTTTCGATATCAC 589 Query 532 AGGATGGCTTTCAGATTATGGAGAATGGAAAATATTACATAAC-TTAGC-CAAAGACAAA 589 ||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| Sbjct 590 AGGATGGCTTTCAGATTATGGAGAATGGAAAATATTACATA-CGTTAGCTCAA-GACAAA 647 Query 590 AATGGTTTGTTGTC--AAAAGATAGCGTCAGGGACATCTACGATGGTAGCCTTTTCGAAA 647 ||||||||||| || |||||| ||||||||| |||||||||||||||||||||| | Sbjct 648 AATGGTTTGTTATCGGAAAAGA--GCGTCAGGGCCATCTACGATGGTAGCCTTTTCCACC 705 Query 648 AACTGGAGaaaaaaa-aT-T-CATCTTCTTCTCGTGGCAAGAAACAAAAACTACCTTAAA 704 ||||||||||||||| || | | |||||||||||||||||||||||||||||||| |||| Sbjct 706 AACTGGAGAAAAAAAGATCTTCTTCTTCTTCTCGTGGCAAGAAACAAAAACTACCATAAA 765 Query 705 TGTTTACGTGAATCTTCTTATATTATTATGGGGGAGATCAAATAA-ATTTCCTGGTTTAT 763 ||||||| |||||||||||||||||||||| || |||||| |||| ||| | |||||||| Sbjct 766 TGTTTACATGAATCTTCTTATATTATTATGTGG-AGATCACATAACATT-CTTGGTTTAT 823 Query 764 AATTATATAATTTGGAAACCAAATAACCTTTGTAATGAATA-TT---TA-A-CTA----T 813 ||||||||||||| | | ||||||| ||||||||||||| || || | | | | Sbjct 824 AATTATATAATTTTGT--C-AAATAACTTTTGTAATGAATAATTACATAGATCAAACACT 880 Query 814 -TT-ATATAATTATTGTGTATATTGACaaaaaaaCACTTATTAAAGTATACTTCATT 868 || | |||||||||||||||||||| ||||||| |||||| ||||||||||||||| Sbjct 881 CTTTAAATAATTATTGTGTATATTGAAAAAAAAAAACTTATCAAAGTATACTTCATT 937 > AT1G23250.1 | Symbols: | Caleosin-related family protein | chr1:8255233-8256770 REVERSE LENGTH=618 Length=618 Score = 532 bits (288), Expect = 2e-150 Identities = 500/596 (84%), Gaps = 39/596 (7%) Strand=Plus/Plus Query 125 AAAGGAGGA-AAATCAGAT-AAGAAAGAATTGACTGCATTGGAGAAACATGTGTCCTTCT 182 |||||| || ||| ||| | | ||| ||| ||||||||||||||||||||||||||||| Sbjct 45 AAAGGAAGATAAA-CAGTTGAGGAAGGAA-AGACTGCATTGGAGAAACATGTGTCCTTCT 102 Query 183 TCGACAGGAACAAAGACGGCACCGTTTATCCATGGGAAACCTACCAA-GGATTTAGAGCG 241 | ||| | ||| ||||||| ||||||||||| |||||||||||| ||||||||||| Sbjct 103 TTGACCGAAACGGTGACGGCATTGTTTATCCATGAGAAACCTACCAAGGGATTTAGAGCA 162 Query 242 CTTGGGACAGGGCGTCTT-TTGGCGGCTTTTGTTGCTATCTTCATCAACATGGGACTCAG 300 || |||||||||||| || || |||||||||||||| ||||| |||||||||||||||| Sbjct 163 CTCGGGACAGGGCGT-TTCATGTCGGCTTTTGTTGCTGTCTTCTTCAACATGGGACTCAG 221 Query 301 CCAAAAAACTCGTCCGGGAAAGAGATTTTC-GCCGT-TGTTTCCAATAGACGTGAAGAAT 358 ||| ||||||||||||| | | | ||| | | | || || || | | ||| Sbjct 222 CCAGAAAACTCGTCCGGTTCA-A-CTATTCGGATATATCTTACC-ATTG--TTTTTGAA- 275 Query 359 AGTCACCTTTGCATGCACGGTAGTGAC-ACCGACGTCTACGACGATGACGGAAGATTTGT 417 | | | |||| ||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct 276 A--C-CATTTGTATGCACGGTAGTGACAACCGACGTCTACGACAAAGACGGAAGATTTGT 332 Query 418 GGAATCAAAATTCGAGGAGATATTCAAGAAGCATGCTCGCACACATAAAGGTGCTCTCAC 477 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 333 GGAATCAAAATTCGAGGAGATATTCAACAAGCATGCTCGCACACATAAAGATGCTCTCAC 392 Query 478 TGCAGAGGAAATTCAAA-AAATGCTTAAGACTAACAGGGATCCTTTCGATATCA-CAGGA 535 |||| |||||||| ||| ||||||||||||||||||| || |||| |||| ||| | ||| Sbjct 393 TGCAAAGGAAATT-AAACAAATGCTTAAGACTAACAGAGAACCTTACGATTTCATC-GGA 450 Query 536 TGGCTTTCAGATTATGGAGAATGGAAAATATTACATAAC-TTAGC-CAAAGACAAAAATG 593 ||||||||||||| | |||||||||||||||||||| | ||||| ||| ||||| || Sbjct 451 TGGCTTTCAGATTTTATAGAATGGAAAATATTACATA-CGTTAGCTCAA-GACAA---TG 505 Query 594 GTTTGTTGTCAAAAGATAGC-GTCAG-GGACATCTACGATGGTAGCCTTTTCGAAAAACT 651 |||||||| | ||||| || || || || | |||||||||||||||||||| || |||| Sbjct 506 GTTTGTTGACGGAAGAT-GCAGTAAGAGG-CGTCTACGATGGTAGCCTTTTCCAACAACT 563 Query 652 GGAGaaaaaaa-aTTCATCTTCTTC-TC--GTGGCAAGAAACAAAAACTACCTTAA 703 ||||||||||| || |||||||||| || |||||||||||||||||||||||||| Sbjct 564 GGAGAAAAAAAGAT-CATCTTCTTCATCTCGTGGCAAGAAACAAAAACTACCTTAA 618 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42347385921 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5