BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472646 Length=1172 Score E Sequences producing significant alignments: (Bits) Value AT1G23860.1 | Symbols: SRZ-21, SRZ21, RSZP21, RSZ21, At-RSZ21 |... 761 0.0 > AT1G23860.1 | Symbols: SRZ-21, SRZ21, RSZP21, RSZ21, At-RSZ21 | RS-containing zinc finger protein 21 | chr1:8427356-8429319 REVERSE LENGTH=1378 Length=1378 Score = 761 bits (412), Expect = 0.0 Identities = 532/587 (91%), Gaps = 20/587 (3%) Strand=Plus/Plus Query 592 TGTTCGTGTTTTATTAGACAATTGGATTTGGTGAATTCTCCTTCAAGCTGTTTTCCAACA 651 |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 788 TGTTCGAGTTTTATTAGACAATTGGATTTGGTGAGTTCTCCTTCATGCTGTTTTCCAACA 847 Query 652 GCCGTCTTGACTTATTCTCTTTAACACGCGCTGGCTTGCTGTCTTCACTCAGCGTGCTTG 711 |||||||||||||||||||| |||||||| ||||| |||||||||||| |||||| |||| Sbjct 848 GCCGTCTTGACTTATTCTCTATAACACGCACTGGCCTGCTGTCTTCACACAGCGTCCTTG 907 Query 712 AACCCCTACACTTGAGGTCGTTCTTTCGTATCCATAAAATATGTTTTGTGTCTTGTTGAA 771 ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| Sbjct 908 AACCCCTACACTTGAGGTCGTTCTTTCGTATCCAT--AA-ATGTTTTGTCTCTTGTTGAA 964 Query 772 TGCACTTACCTTATCATATAATATGTGTGACATATCTAAAAGGCTCAACTGTTTCCACTC 831 ||||||| |||||| ||| ||| ||||||||||||| |||||||||||||||||| Sbjct 965 TGCACTTTCCTTAT--TAT-ATA-----GACATATCTAAAAAGCTCAACTGTTTCCACTC 1016 Query 832 TTTTTCCCTTGTGAGGTATGATTTATCGGGGATCTCTCCGCAGCTGC-GCTGCATCTTAC 890 ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct 1017 TTTTTCCCTTGTGAGGTATGATTTATCGGGGATCTCTTGGCAGCA-CAGCTGCATCTTAC 1075 Query 891 TCTCCCCTCAACTTAGCTTTG-CTATGAATCTGCATCGTCAACTCGACCATCATCAGCTA 949 ||||||| |||||||| ||| | ||||||||||||| |||||||||||| ||||||||| Sbjct 1076 TCTCCCCACAACTTAGTTTTATC-ATGAATCTGCATCCTCAACTCGACCAACATCAGCTA 1134 Query 950 GA-TTTGCTTGTTACATTGTGTGACTTTTAGATTGCCCTGCTCTTTACTCACAACTCTTA 1008 || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 1135 GAATTTGCTTGTTACATTGTGTGACTTTTAGATTGCCCTGCTCTTTACTCACCACTCCTA 1194 Query 1009 CCCCAA-TCTGCAAACCAAGCTTCTAAGGAGAAGGACAAAGCTGTTTCTTCACCCCGCCC 1067 |||||| ||||||| ||||||||||| ||||| ||| || |||||||||||||||| || Sbjct 1195 CCCCAAGTCTGCAA-CCAAGCTTCTATTGAGAAAGACGAATCTGTTTCTTCACCCCGTCC 1253 Query 1068 TCTCCCTCGCTCTCAGCTGCTTTATCACCCCTTGGGTTCTCTGCTCACTTTTGTTTT-CG 1126 ||| ||| |||||| |||||| ||||||| ||||| |||||| |||||||||||||| || Sbjct 1254 TCTTCCTAGCTCTCGGCTGCTATATCACCACTTGGTTTCTCTACTCACTTTTGTTTTTCG 1313 Query 1127 GTCAACTTTGC-ACACATCTGTTGGTGGATCACACACTTACATTAAA 1172 |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1314 GTCAACTTTGTTACACATCTGTTGGTGGATCACACACTTACATTAAA 1360 Score = 586 bits (317), Expect = 2e-166 Identities = 368/393 (94%), Gaps = 2/393 (1%) Strand=Plus/Plus Query 1 ATGACGAGGGTTTACGTCGGGAATTTGGACCCAAGGGTCACCGAAAGAGAACTCGAAGAC 60 |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||| Sbjct 80 ATGACGAGGGTTTATGTCGGGAATTTGGACCCACGCGTCACCGAAAGAGAACTCGAAGAC 139 Query 61 GAATTCAGAATC-TTCGGCGTTCTTCGCAATGTTTGGGTAGCTCGTAGGCCTCCTGGCTA 119 ||||||| | | ||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct 140 GAATTCA-AGGCCTTCGGTGTTCTTCGCAATGTCTGGGTAGCTCGTAGACCTCCTGGCTA 198 Query 120 CGCTTTCCTCGAGTTCGATGACGAGAGAGATGCTTTGGATGCAATTAGGGCATTGGATCG 179 ||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct 199 CGCATTCCTCGAGTTCGATGACGAAAGAGATGCTTTGGATGCAATCAGCGCATTGGATCG 258 Query 180 AAAGAATGGGTGGCGTGTGGAGCTTTCTCATAAAGATAAAGGTGGTCGTGGAGGCGGTGG 239 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 259 AAAGAATGGGTGGCGTGTGGAGCTTTCTCATAAAGATAAAGGAGGTCGTGGAGGTGGTGG 318 Query 240 TGGTCGTCGTGGCGGTATTGAGGATTCTAAGTGCTATGAGTGCGGTGAACTTGGACATTT 299 |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct 319 TGGTCGTCGTGGAGGTATTGAGGATTCCAAGTGCTATGAGTGTGGTGAGCTTGGACATTT 378 Query 300 TGCTCGGGAGTGTCGCCGTGGTCGAGGCTCTGCGAGGCGTAGAAGCCCTAGTCCTCGTCG 359 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 379 TGCTCGCGAGTGTCGCCGTGGTCGAGGCTCTGTGAGGCGTAGAAGCCCTAGTCCCCGTCG 438 Query 360 TCGTAGGAGTCCAGATTATGGGTATGGACGCAG 392 |||||||||||||||||||||||||| ||||| Sbjct 439 TCGTAGGAGTCCAGATTATGGGTATGCTCGCAG 471 Score = 209 bits (113), Expect = 4e-53 Identities = 148/163 (91%), Gaps = 10/163 (6%) Strand=Plus/Plus Query 391 AGCTACAGCAGATCCCCTCCTTATCGTGGTTCGCGCCGGGATTCTCCTCGCCGCAGAGAC 450 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 542 AGCTACAGCAGATCCCCTCCTTATCGTGGTTCACGCCGTGATTCTCCTCGCCGCAGAGAC 601 Query 451 TCACCCTATGGTCGACGTTCGCCATATGCCAATGGGTAAGGTGTGAAACTGGACCCTGAA 510 || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 602 TCGCCCTATGGTCGACGTTCGCCATATGCCAATGGG---G-TGTGAAACTGGACCCTGAA 657 Query 511 GAGAAAGAAGATATTAAAACTTCTATGCTATGATGCTATATCT 553 |||||||||| ||||| || | ||||||||||||||||| Sbjct 658 GAGAAAGAAGCTATTA---CTA--A-GCTATGATGCTATATCT 694 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57529824570 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5