BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472652 Length=3183 Score E Sequences producing significant alignments: (Bits) Value AT1G23900.1 | Symbols: GAMMA-ADAPTIN 1, Gamma-ADR | gamma-adapt... 4669 0.0 AT1G23940.1 | Symbols: | ARM repeat superfamily protein | chr1... 1074 0.0 AT1G23965.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 261 3e-68 > AT1G23900.1 | Symbols: GAMMA-ADAPTIN 1, Gamma-ADR | gamma-adaptin 1 | chr1:8441171-8447519 FORWARD LENGTH=3141 Length=3141 Score = 4669 bits (2528), Expect = 0.0 Identities = 2832/2978 (95%), Gaps = 24/2978 (1%) Strand=Plus/Plus Query 179 TCCTCGTAAAGTTACCGGTGGACCAAGGTCCAACTCTTGAACATCTCAAATCATGAATCC 238 ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 92 TCCTCGTAAAGTTGCCGGTGGACCAAGGTCCAACTCTTGAACACCCCAAATCATGAATCC 151 Query 239 CTTTTCTTCTGGTACTCGTCTAAGGGACATGATCCGTGCCATAAGAGCATGTAAAACAGC 298 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 152 CTTTTCTTCTGGTACTCGTTTAAGGGACATGATCCGTGCCATAAGAGCATGCAAAACAGC 211 Query 299 TGCGGAGGAGCGTGCTGTTGTAAGAAAAGAGTGTGCCGATATTCGAGCATTAATTAATGA 358 |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 212 TGCGGAGGAGCGAGCTGTTGTAAGAAAGGAGTGTGCCGATATTCGAGCATTGATTAATGA 271 Query 359 AGATGACCCGCACGATAGGCACCGGAACCTTGC-AAAGCTCATGTTTATACACATGTTGG 417 |||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||| ||| Sbjct 272 AGATGACCCGCATGATCGGCACCGGAACCTTGCGAAA-CTCATGTTTATACACATGCTGG 330 Query 418 GTTA-CCCGACACACTTTGGGCAGATGGAGTGCTTGAAGCTAATTGCATCTCCTGGATTT 476 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 331 GTTATCCC-ACACACTTTGGGCAGATGGAGTGCTTGAAGCTAATTGCATCTCCTGGATTT 389 Query 477 CCAGAGAAGAGGATTGGATATCTTGGGTTAATGTTGCTTCTTGATGAGAGACAAGAAGTC 536 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 390 CCAGAGAAGAGGATTGGATATCTAGGGCTAATGTTGCTTCTTGATGAGAGACAAGAAGTG 449 Query 537 TTGATGCTTGTCACAAATTCGTTAAAACAAGATCTTAATCACTCGAACCAGTATGTTGTA 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450 TTGATGCTTGTCACAAATTCGTTAAAACAAGATCTTAATCACTCGAACCAGTATGTTGTA 509 Query 597 GGACTGGCTCTCTGTGCTTTAGGGAATATTTGTTCAGCGGAAATGGCCCGTGATCTTGCG 656 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 510 GGACTTGCTCTCTGTGCTTTAGGGAATATTTGTTCAGCAGAAATGGCCCGTGATCTTGCG 569 Query 657 CCAGAAGTAGAAAGATTAATCCAGTTTCGTGACCCTAATATCCGAAAGAAGGCGGCGCTT 716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 CCAGAAGTAGAAAGATTAATCCAGTTTCGTGACCCTAATATCCGAAAGAAGGCGGCGCTT 629 Query 717 TGCTCTACGAGAATAGTAAGGAAAGTTCCAGATCTTGCAGAAAACTTTGTAAACGCTGCT 776 |||||||| |||||| ||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 630 TGCTCTACTAGAATAATAAGGAAAGTTCCAGATCTAGCAGAAAACTTCGTAAATGCTGCT 689 Query 777 GCTTCCTTGCTTAAAGAAAAGCATCATGGGGTTCTTATAACAGGAGTTCAACTTTGTTAT 836 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 GCTTCCTTGCTTAAAGAAAAGCATCATGGGGTTCTTATAACAGGAGTTCAACTTTGTTAT 749 Query 837 GAATTATGCACGATTAGTGATGAAGCCCTAGAGTACTTCAGAACGAAATGCACGGAGGGA 896 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 750 GAATTATGCACGATTAATGATGAAGCCCTAGAGTACTTCAGAACGAAATGCACAGAGGGA 809 Query 897 CTTATAAAAACTTTGAGGGATATGACTAATAGCGCATATCAGCCTGAGTATGATGTTGCA 956 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 810 CTGATAAAAACTTTGAGGGATATTACTAATAGCGCATATCAGCCTGAGTATGATGTTGCA 869 Query 957 GGGATCACAGACCCTTTTCTTCACATACGGTTGCTCAGGCTCCTGCGTGTTTTAGGCCAG 1016 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 870 GGGATCACAGACCCTTTTCTCCACATACGGTTGCTCAGGCTCTTGCGTGTTTTAGGCCAG 929 Query 1017 GGTGACGCTGATGCTAGTGATTTGATGACTGATATACTTGCCCAGGTGGCAACAAAAACT 1076 ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 930 GGTGATGCTGATGCTAGTGATTTGATGACAGATATACTTGCACAGGTGGCAACAAAAACT 989 Query 1077 GAATCAAACAAAAACGCAGGGAATGCGGTACTCTATGAGTGCGTTGAAACAATCATGGCC 1136 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 990 GAATCAAACAAAAACGCAGGGAATGCGGTACTCTATGAGTGTGTTGAAACAATCATGGCC 1049 Query 1137 ATTGAAGACACCAATAGCTTGCGTGTGCTTGCTATCAATATCTTGGGAAGATTCTTATCT 1196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1050 ATTGAAGACACCAATAGCTTGCGTGTGCTTGCTATCAATATCTTGGGAAGATTCTTATCT 1109 Query 1197 AACCGCGACAATAACATCAGGTATGTTGCATTAAACATGCTGATGAAAGCAATCACTTTC 1256 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1110 AACCGCGACAATAACATCAGATATGTTGCATTAAACATGCTGATGAAAGCTATCACTTTC 1169 Query 1257 GATGATCAAGCAGTGCAAAGGCACAGAGTTACAATTTTGGAATGTGTTAAGGACCCAGAT 1316 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1170 GATGATCAAGCAGTGCAAAGGCACAGAGTTACAATTTTGGAATGTGTGAAGGACCCAGAT 1229 Query 1317 GCTTCTATCCGGAAAAGAGCTCTGGAGCTTGTCACTCTTTTGGTGAATGAGAATAATGTC 1376 ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct 1230 GCTTCTATCCGGAAAAGAGCTCTTGAGCTTGTCACTCTTTTGGTGAATGAAAACAATGTC 1289 Query 1377 ACACAACTGACAAAGGAGCTAATTGATTATTTGGAAATCAGCGACGAAGATTTTAAGGAA 1436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1290 ACACAACTGACAAAGGAGCTAATTGATTATTTGGAAATCAGCGACGAAGATTTTAAGGAA 1349 Query 1437 GATCTTAGTGCAAAAATTTGTTTTATCGTCGAAAAGTTTTCTCCAGAAAAACTATGGTAC 1496 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1350 GATCTTAGTGCAAAAATTTGTTTTATCGTTGAAAAGTTTTCTCCAGAAAAACTATGGTAC 1409 Query 1497 ATTGATCAGATGCTTAAGGTTCTGTGTGAGGCTGGAAAGTTTGTGAAAGATGATGTGTGG 1556 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1410 ATTGATCAGATGCTCAAGGTTCTGTGTGAGGCTGGAAAGTTTGTGAAAGATGATGTGTGG 1469 Query 1557 CACGCGCTTATTGTTGTCATAAGCAATGCATCAGAGCTTCATGGATATACAGTTAGGGCA 1616 || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1470 CATGCACTTATTGTTGTCATAAGCAATGCATCAGAGCTTCATGGATATACAGTTAGGGCC 1529 Query 1617 TTATACAAAGCAGTCTTGACGTATTCGGAACAGGAGACCCTTGTTCGAGTGGCGGTGTGG 1676 || |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct 1530 TTGTACAAATCAGTCTTGACTTATTCGGAACAGGAGACCCTTGTCCGAGTGGCGGTATGG 1589 Query 1677 TGCATTGGGGAATATGGCGATCTGTTGGTTAACAATGAGGGGATGCTTGGTATTGAAGAT 1736 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 1590 TGCATTGGGGAATATGGTGATCTGTTGGTTAACAATGTGGGGATGCTTGGTATTGAAGAT 1649 Query 1737 CCAATAACGGTAACGGAATCGGATGCAGTGGACGTTATCGAGGAGGCCATTACTCGCCAT 1796 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1650 CCAATAACGGTAACGGAATCTGATGCAGTGGACGTTATCGAGGATGCCATTACTCGCCAT 1709 Query 1797 AACTCAGATTCGACTACAAAAGCAATGGCATTGGTTGCTCTACTGAAGCTGTCATCCCGC 1856 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1710 AACTCAGATTCGACTACAAAAGCAATGGCATTGGTTGCTCTACTGAAGTTGTCATCCCGC 1769 Query 1857 TTTCCTTCTATATCAGAGAGAATTAAAGACATAATTGTGAAGCAGAAAGGAAGCCTTCTC 1916 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1770 TTTCCTTCTATTTCAGAGAGAATTAAAGACATAATTGTGAAGCAGAAAGGAAGCCTTCTC 1829 Query 1917 CTTGAAATGCAGCAGAGAGCTATTGAATTCAATTCTATAGTTGACAGGCATAAAAATATC 1976 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1830 CTTGAAATGCAGCAGAGAGCTATTGAATACAATTCTATAGTTGACAGGCATAAAAATATC 1889 Query 1977 AGGTCTACTCTGGTTGACAGAATGCCGGTACTGGATGAGGCTACTTTCAATGTGAGGAGG 2036 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1890 AGGTCTTCTCTGGTTGACAGAATGCCGGTACTGGATGAGGCTACTTTCAATGTGAGGAGG 1949 Query 2037 GCCGGCTCTTTTCCTGCATCAGCTTCAACAATGGCAAAGCCTTCAGTTAGTCTTCCAAAT 2096 |||||||||||||||||||||| |||||| ||||| |||||||||||||| |||| |||| Sbjct 1950 GCCGGCTCTTTTCCTGCATCAGTTTCAACCATGGCCAAGCCTTCAGTTAGCCTTCAAAAT 2009 Query 2097 GGTGTTGAGAAACCTGTTGTAGCTCCTCTTGTGGATTTGCTAGACCTAGGTTCAGACGAT 2156 ||||||||||||| | ||| |||||||||||||| ||||||||||||| ||| |||||| Sbjct 2010 GGTGTTGAGAAACTTCCTGTCGCTCCTCTTGTGGACTTGCTAGACCTAGATTCTGACGAT 2069 Query 2157 ATCCTGGCTACACCTAGTTCATCTGGTCCAGATTTTCTTCAGGATCTTCTCGGTGTTGAC 2216 ||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||||| ||| Sbjct 2070 ATCATGGCTGCACCTAGTCCATCTGGTACAGATTTCCTTCAGGATCTTCTCGGTGTAGAC 2129 Query 2217 TTAGGAGCATCGTCATCACAACCTGGTGCAACGTTGGCTCCGAGAACC-GGCACAGATCT 2275 ||||| |||||||| ||||| ||||||||| |||||| | || | ||||||||||| Sbjct 2130 TTAGGTTCATCGTCAGCACAATATGGTGCAACCCAGGCTCCAA-AAGCTGGCACAGATCT 2188 Query 2276 GTTGATGGATATTCTATCAATTGGAACACCTTCTCCTGCACAAAACAGCACATCATCTGT 2335 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2189 GTTGCTGGATATTCTATCAATTGGAACACCTTCTCCTGCACAAAACAGCACATCATCTAT 2248 Query 2336 TGATTTATTATCAACAGCTGACGTAAACAGTAATCCCTCAATTGCGCTAGACACACTTTC 2395 || ||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 2249 TGGTTTATTATCAATAGCTGACGTTAACAATAATCCCTCAATTGCGCTAGACACACTTTC 2308 Query 2396 TTCACCAGCTCCACCTCACGTAGCAACGACTTCGTCCAACGGTATGTTTGATTTGTTACA 2455 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || | Sbjct 2309 TTCACCAGCTCCACCTCACGTAGCAACAACTTCGTCCACCGGTATGTTTGATTTGCTAGA 2368 Query 2456 TGGTCTTTCTCCAAGCCCATCGAAGGAAGCCACCAATGGTCCAGCATATCCACCAATTGT 2515 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct 2369 TGGTCTTTCTCCAAGCCCATCGAAGGAAGCCACCAATGGTCCAGCTTATGCACCTATTGT 2428 Query 2516 TGCATACGAGAGCAGCTCCTTGAAGATTGAGTTCACCTTCTCAAAGGCACCAGGGAATCT 2575 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2429 TGCATACGAGAGCAGCTCCTTGAAGATTGAGTTCACCTTCTCAAAGACACCAGGGAATCT 2488 Query 2576 GCAATCGACAAATGTCCAAGCTACTTTTACTAATTTATCTCCCAATACTTTCACAGATTT 2635 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2489 GCAAACGACAAATGTCCAGGCTACTTTTACTAATTTATCTCCCAATACTTTCACAGATTT 2548 Query 2636 TATATTCCAAGCTGCTGTTCCAAAGTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAA 2695 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2549 TATATTCCAGGCTGCTGTTCCAAAGTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAA 2608 Query 2696 CACACTCCCGGCAAGCGGTAACGGTGCCATCACGCAGAATCTAAGAGTCACTAACAGCCA 2755 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2609 CACACTCCTGGCAAGCGGTAGTGGTGCCATCACGCAGAATCTAAGAGTCACTAACAGCCA 2668 Query 2756 GCACGGGAAGAAATCCCTTGTGATGCGCATGAGGATTGGGTACAAACTGAACGGAAAAGA 2815 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2669 GCAGGGGAAGAAATCTCTTGTGATGCGCATGAGGATTGGGTACAAACTGAACGGAAAAGA 2728 Query 2816 TGTATTAGAGGAAGGACAAGTCAGCAACTTCCCTCGCGGGTTGTAAAACTGATCGATCAG 2875 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 2729 TGTATTAGAGGAAGGACAAGTCAGCAACTTCCCTCGCGGGTTGTGAAACTCATCGATCAG 2788 Query 2876 CCATTGTATTTTCAGCAGAAGGACTTGAGTGTTTCTTT-TCATCAA-CCCGACTaaaaaa 2933 ||||||||||||||||| |||||||||||||||||||| | ||||| ||| ||||||||| Sbjct 2789 CCATTGTATTTTCAGCATAAGGACTTGAGTGTTTCTTTCT-ATCAAACCCAACTAAAAAA 2847 Query 2934 aGAAAGACAAGTCTAGCCCAAGCCGTTGATGCAGCAAAAGCAGCTTTCTCCTTCCAATTC 2993 ||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 2848 -GAAAGACAAGTCTTGCCCAAGCCGTTGATGCAGC---------TTTCTCCTTCCAATT- 2896 Query 2994 TTTTCATCTGTTTCATGAAACAAGTA---CTTTGGCCTTTGTTTGTGATTTGAGGTTCTT 3050 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct 2897 TTTTCATCCGTTTTATGAAACAAGTAGTACTTTGGCCTTTGCTTGTGATTTGAGGTTCTT 2956 Query 3051 GGGGTTTCTTTTTGTACAAAAGTTTTGATGTTTGGAATCGGAAAGCGGTCAAGGAAGAAG 3110 ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || Sbjct 2957 GGGTTTTCTTTTTGTACAAAAGTTTTGATGTTTGGAATCGGAAAGTGGTCAAG-AAGTAG 3015 Query 3111 AGTTTGTCTCTCTTGTGTCTAAGACTACAAAAAACATG 3148 | |||||||||| ||| ||| |||||| |||||| ||| Sbjct 3016 AATTTGTCTCTCATGTCTCTGAGACTATAAAAAAGATG 3053 Score = 121 bits (65), Expect = 5e-26 Identities = 81/88 (92%), Gaps = 4/88 (5%) Strand=Plus/Plus Query 25 aaaaaaaCGAGCATCTTCCATCGAGATCCAAATCCTCAGTTTCTTTTTCATCTCTCTC-- 82 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 2 AAAAAAACGAGCATCGTCCATCGAGATCCAAATCCTCAGTTTCATTTTCATCTCTCTCTC 61 Query 83 --GTATTGATCAGCTACTCGAAGCTCCG 108 |||||||||||||||||||| ||||| Sbjct 62 TCGTATTGATCAGCTACTCGAAACTCCG 89 Score = 73.1 bits (39), Expect = 2e-11 Identities = 39/39 (100%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 3145 CATGATGTATCTACTACAGTTACAATTTTCGTCTTGCAA 3183 ||||||||||||||||||||||||||||||||||||||| Sbjct 3079 CATGATGTATCTACTACAGTTACAATTTTCGTCTTGCAA 3117 > AT1G23940.1 | Symbols: | ARM repeat superfamily protein | chr1:8466094-8469346 FORWARD LENGTH=1488 Length=1488 Score = 1074 bits (581), Expect = 0.0 Identities = 734/803 (91%), Gaps = 29/803 (4%) Strand=Plus/Plus Query 262 GGGACATGATCCGTGCCATAAGAGCATGTAAAACAGCTGCGGAGGAGCGTGCTGTTGTAA 321 ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct 404 GGGACATGATCCGTGCCGTAAGAGCATGTCAAACAGCTGCGGAGGAGCGAGCTGTTGTAA 463 Query 322 GAAAAGAGTGTGCCGATATTCGAGCATTAATTAATGAAGATGACCCGCACGATAGGCACC 381 |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 464 GAAAAGAGTGTGCCAATATCCGAGCATTAATTAATGAAGATGACCCGCATGATAGGCACC 523 Query 382 GGAACCTTGCAAAGCTCATGTTTATACACATGTTGGGTTACCCGACACACTTTGGGCAGA 441 ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||| ||||| Sbjct 524 GGAACCTTGCAAAACTCATGCTCATACACATGCTGGGTTACCCGACACACTTTGTGCAGA 583 Query 442 TGGAGTGCTTGAAGCTAATTGCATCTCCTGGATTTCCAGAGAAGAGGATTGGATATCTTG 501 ||||||| ||||||||||||||||||||||||||||||||| | | || || | || Sbjct 584 TGGAGTGTTTGAAGCTAATTGCATCTCCTGGATTTCCAGAG-A-A-GA--GG--A--TT- 633 Query 502 GGTTAATGTTGCTTCTTGATGAGAGACAAGAAGTCTTGATGCTTGTCACAAATTCGTTAA 561 || | | || | || | | || | ||||||||||||||||| ||||||| Sbjct 634 GG---A---T--ATC-T--TG-G-G---TTAA-TGTTGATGCTTGTCACAAAGTCGTTAA 676 Query 562 AACAAGATCTTAATCACTCGAACCAGTATGTTGTAGGACTGGCTCTCTGTGCTTTAGGGA 621 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 677 AACAAGATCTTAATCACTCGAACCAGTATGTTGTAGGACTCGCTCTCTTTGCTTTAGGGA 736 Query 622 ATATTTGTTCAGCGGAAATGGCCCGTGATCTTGCGCCAGAAGTAGAAAGATTAATCCAGT 681 |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct 737 ATATTTGTTCAGCGGAAATGGCCCCTGATCTTGCGCCAGAAGTAGAAAGATTAGTCCAGT 796 Query 682 TTCGTGACCCTAATATCCGAAAGAAGGCGGCGCTTTGCTCTACGAGAATAGTAAGGAAAG 741 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 797 TTCGTGACCCTAATATCCGAAAGAAGGCGGCGCTTTGCTCTACTAGAATAGTAAGGAAAG 856 Query 742 TTCCAGATCTT-GCAGAAAACTTTGTAAACGCTGCTGCTTCCTTGCTTAAAGAAAAGCAT 800 |||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 857 TTCCAGAT-TTAGTAGAAAACTTTGTAAACGCTGATGCTTCCTTGCTTAAAGAAAAGCAT 915 Query 801 CATGGGGTTCTTATAACAGGAGTTCAACTTTGTTATGAATTATGCACGATTAGTGATGAA 860 ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 916 CATGGGGTTCTAATAAGAGGAGTTCAACTTTGTTATGAATTATGCACGATTAATGATGAA 975 Query 861 GCCCTAGAGTACTTCAGAACGAAATGCACGGAGGGACTTATAAAAACTTTGAGGGATATG 920 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 976 GCCCTAGAGTACTTCAGAACGAAATGCACGGAGGGACTGATAAAATTTTTGAGGGATATT 1035 Query 921 ACTAATAGCGCATATCAGCCTGAGTATGATGTTGCAGGGATCACAGACCCTTTTCTTCAC 980 |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1036 ACTAATTGTGCATATCAGCCTGAGTACGATGTTGCAGGGATCACAGACCCTTTTCTTCAA 1095 Query 981 ATACGGTTGCTCAGGCTCCTGCGTGTTTTAGGCCAGGGTGACGCTGATGCTAGTGATTTG 1040 | ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 AGACGGTTGCTAAGGTTCTTGCGTGTTTTAGGCCAGGGTGACGCTGATGCTAGTGATTTG 1155 Query 1041 ATGACTGATATACTTGCCCAGGT 1063 |||||| |||||||||||||||| Sbjct 1156 ATGACTCATATACTTGCCCAGGT 1178 Score = 436 bits (236), Expect = 5e-121 Identities = 277/297 (93%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 1821 ATGGCATTGGTTGCTCTACTGAAGCTGTCATCCCGCTTTCCTTCTATATCAGAGAGAATT 1880 |||| ||||||||||||| ||||||||| ||| ||||||||||||| ||| |||||||| Sbjct 1 ATGGAATTGGTTGCTCTAGTGAAGCTGTTATCTGGCTTTCCTTCTATTTCAAAGAGAATT 60 Query 1881 AAAGACATAATTGTGAAGCAGAAAGGAAGCCTTCTCCTTGAAATGCAGCAGAGAGCTATT 1940 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 61 AAAGACATAATTGTGAAGCAGAAAGGAAGCCTTCTTCTTGGAATGCAGCAGAGAGCTATT 120 Query 1941 GAATTCAATTCTATAGTTGACAGGCATAAAAATATCAGGTCTACTCTGGTTGACAGAATG 2000 || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 121 GAGTACAATTCTATAGTTGACAGGCATAAAAATATCAGGTCTTCTCTGGTTGACAGAATG 180 Query 2001 CCGGTACTGGATGAGGCTACTTTCAATGTGAGGAGGGCCGGCTC-TTTTCCTGCATCAGC 2059 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 181 CCGGTACTGGATGAGGCTACTTTCAATGTGAGGAGGGCCGGC-CATTTTCCTGCATCAGC 239 Query 2060 TTCAACAATGGCAAAGCCTTCAGTTAGTCTTCCAAATGGTGTTGAGAAACCTGTTGT 2116 |||||||||||| || ||||||||| ||||||||||||||||||||||||| ||| Sbjct 240 TTCAACAATGGCTCAGTTTTCAGTTAGCCTTCCAAATGGTGTTGAGAAACCTGCTGT 296 > AT1G23965.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70270.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8480422-8481486 REVERSE LENGTH=1065 Length=1065 Score = 261 bits (141), Expect = 3e-68 Identities = 196/221 (89%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 2768 ATCCCTTGTGATGCGCATGAGGATTGGGTACAAACTGAACGGAAAAGATGTATTAGAGGA 2827 ||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||| Sbjct 211 ATCCCATGTGATGCG-ATTAGGATTGGGTA-AAACTGAACGGAAAAGATGTATTAGAGGA 154 Query 2828 AGGACAAGTCAGCAACTTCCCTCGCGGGTTGTAAAACTGATCGATCAGCCATTGTATTTT 2887 |||||||||||||||||||||||||||||||| | |||||||||||||| |||| Sbjct 153 AGGACAAGTCAGCAACTTCCCTCGCGGGTTGTG---C----CGATCAGCCATTGTCTTTT 101 Query 2888 CAGCAGAAGGACTTGAGTGTTTCTTTTCATCAACCCGACTaaaaaaaGAAAGACAAGTCT 2947 ||||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||| Sbjct 100 CAGCACAAGGACTTGAGTGTTTATCATCATCAACCCGACTAAAAAG-GAAAGACAAGTCT 42 Query 2948 AGCCCAAGCCGTTGATGCAGCAAAAGCAGCTTTCTCCTTCC 2988 ||||| ||||||||| ||||||| | ||||||||||||| Sbjct 41 TCCCCAATCCGTTGATGGAGCAAAACCGGCTTTCTCCTTCC 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 158326872108 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5