BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472678
Length=1588
Score E
Sequences producing significant alignments: (Bits) Value
AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar... 2375 0.0
AT1G70090.1 | Symbols: GATL9, LGT8 | glucosyl transferase famil... 1009 0.0
AT1G02720.1 | Symbols: GATL5 | galacturonosyltransferase 5 | ch... 148 1e-34
AT4G02130.1 | Symbols: GATL6, LGT10 | galacturonosyltransferase... 128 2e-28
> AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar
transferases superfamily protein | chr1:8557216-8558832 REVERSE
LENGTH=1617
Length=1617
Score = 2375 bits (1286), Expect = 0.0
Identities = 1500/1597 (94%), Gaps = 40/1597 (3%)
Strand=Plus/Plus
Query 19 ttcttcttcttcttcctctttccttatctctccatctctGTGGAGAGACACAAAACTTCA 78
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33 TTCTTCTTCTTCTTCCTCTTTCCTTATCTCTCCATCTCTGTGGAGAGACACAAAACTTCC 92
Query 79 AAAAAGGAACATTCTTTCAATTCTTTACTTAATCTTTCACAATGCTATATCATTAG-C-T 136
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| | |
Sbjct 93 AAAAAGGAACATTCTTTCAGTTCTTTACTTAATCTTTCACAATGCTAAATCATTAGCCGT 152
Query 137 T--T-AA-TCTT-TTCTTT-A---ATTCAAACGCG-tttt-tttAGTAATGTCGTCGCGT 185
| | || |||| ||||| | ||||||||||| |||| |||||||||||||||||||
Sbjct 153 TGATAAAGTCTTAATCTTTGATTCATTCAAACGCGTTTTTGTTTAGTAATGTCGTCGCGT 212
Query 186 TTTTCTTTAACGGTGGTGTGTTTGATTGTTCTGTTACCGTTTGCCGTTGGAATACGGTTG 245
|||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 213 TTTTCTTTGACGGTGGTGTGTTTGATTGCTCTGTTACCGTTTGTTGTTGGTATACGGTTG 272
Query 246 ATTCCGGCGAGGATCATGAGTGTC-G-G-TGGCGGAGGAGGAGGAGG---TAATGGGTTT 299
|||||||||||||||| ||||||| | | |||||| || |||||||| ||||||||||
Sbjct 273 ATTCCGGCGAGGATCACGAGTGTCGGTGATGGCGGCGGCGGAGGAGGTAATAATGGGTTT 332
Query 300 AGTAAACTTGGTCCGTTTATGGAAGCTCCGGATTACAGAAACGGCAAGGAGTGTGTGTCG 359
|||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 333 AGTAAACTTGGTCCGTTTATGGAAGCTCCGGAGTATAGAAACGGCAAGGAGTGTGTATCT 392
Query 360 TCATCAGTGAACAGAGACAACTTCGTGTCG---TCTTC---TTCTAATGATCCTTCGCTT 413
||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct 393 TCATCAGTGAACAGAGAGAACTTCGTGTCGTCTTCTTCTAGTTCTAATGATCCTTCGCTT 452
Query 414 GTTCACATAGCTATGACTTTGGATTCAGAGTATCTCCGTGGATCAATCGCAGCCGTTCAT 473
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 453 GTTCACATCGCTATGACTTTGGACTCAGAGTATCTCCGTGGATCAATCGCAGCCGTTCAT 512
Query 474 TCTGTTCTCCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAG 533
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 TCTGTTCTTCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAG 572
Query 534 TTTGACTCGGCGAGTCCTCGTGTGCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGCTG 593
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 573 TTTGACTCTGCGAGTCCTCGTGTTCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGTTG 632
Query 594 AACTTTAAAGTCTACATTTATAGGGAAGATACGGTGATCAATCTCATATCGTCGTCGATT 653
||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 633 AACTTTAAAGTCTACATTTTTAGGGAAGATACGGTGATCAATCTCATATCTTCTTCGATT 692
Query 654 AGACAAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGAT 713
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 693 AGACTAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGAT 752
Query 714 CGAAGCGTGGAACGAGTCATTTATCTTGACTCAGATGTTATAACTGTTGATGATATCACA 773
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 753 CGAAGTGTTGAACGAGTCATTTATCTTGACTCGGATGTTATAACTGTGGATGATATCACA 812
Query 774 AAGCTTTGGAACACGGTTTTGACCGGGTCACGGGTTATCGGAGCTCCGGAGTATTGTCAC 833
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 813 AAGCTTTGGAACACGGTTTTGACCGGGTCACGAGTCATCGGAGCTCCGGAGTATTGTCAC 872
Query 834 GCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTACCGGGTCTA 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 GCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTACCGGGTCTA 932
Query 894 ATCTCGGGTCAAAAACCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTAAGA 953
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 933 ATCTCGGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTTAGA 992
Query 954 TGGAGAGAAGGGAATTACAGAGAGAAGCTAGAGCAATGGATGCAATTGCAGAAGAAGAAG 1013
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 993 TGGAGAGAAGGGAATTACAGAGAGAAGTTAGAGCAATGGATGCAATTGCAGAAGAAGATG 1052
Query 1014 AGAATCTACGATCTTGGATCATTACCACCGTTTCTTTTGGTGTTTGCTGGTAATGTTGAA 1073
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1053 AGAATCTACGATCTTGGATCATTACCACCGTTTCTTTTGGTGTTTGCGGGTAATGTTGAA 1112
Query 1074 GCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGAAGTTGT 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1113 GCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGAAGTTGT 1172
Query 1134 CGGTCATTGCATCCTGGTCCTGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1193
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1173 CGGTCATTGCATCCTGGTCCTGTGAGCTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1232
Query 1194 GTTAGACTTGATGAGAAGAGACCTTGTCCGTTGGATCATCTTTGGGAGCCATATGATTTG 1253
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1233 GTTAGACTTGATGAGAAGAGGCCTTGTCCGTTGGATCATCTTTGGGAGCCATATGATTTG 1292
Query 1254 TATAAACATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTTCTCTGTCG 1313
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 TATAAGCATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTTCTCTGTCG 1352
Query 1314 GAGTTGACTGATGATTCAAGCTTTTTGTGAGAGTTTaaaaaaaGTTTCATTCTTTTTTCA 1373
||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||| ||
Sbjct 1353 GAGTTGACTGATGATTCAAGCTTCTTGTGAGAGTTTTAAA---GTTACATTCTTTTT-CA 1408
Query 1374 TAAATCTTCTGTTGTATTACAGAGTTTACAAATATCATTGTTCAGGTGAGTGATTCTTTG 1433
| |||||||||||||||||||| | | || ||||||||||||||||||||||||||||
Sbjct 1409 -ATATCTTCTGTTGTATTACAGA-TG-A-AA-TATCATTGTTCAGGTGAGTGATTCTTTG 1463
Query 1434 ATTGTCTGGTGTACAAAATCGATTTTAGAGAGGGAAGAGATATAG-AGGCTGTGGAAAAG 1492
||| |||| |||||||| || ||||||||||||||||| ||||| ||||||||||||||
Sbjct 1464 ATTTTCTGTTGTACAAA-TCTATTTTAGAGAGGGAAGATATATATTAGGCTGTGGAAAAG 1522
Query 1493 CCATTGATGACCCTTATTTTTGTTGAGAATTCTTTTGTCATTTTGGTGCTCTTGT-TTCC 1551
|||||||||| |||| ||| ||||||||||||||||||||| ||| |||||||| || |
Sbjct 1523 CCATTGATGATCCTT-TTT--GTTGAGAATTCTTTTGTCATTCTGGCGCTCTTGTGTTTC 1579
Query 1552 AATCTTTTGTTCTGAATAAAACTCATCTTGAAGTGCC 1588
|||||||| |||| |||||||||||||||||||||||
Sbjct 1580 AATCTTTTCTTCTTAATAAAACTCATCTTGAAGTGCC 1616
> AT1G70090.1 | Symbols: GATL9, LGT8 | glucosyl transferase family
8 | chr1:26400790-26402397 FORWARD LENGTH=1608
Length=1608
Score = 1009 bits (546), Expect = 0.0
Identities = 896/1060 (85%), Gaps = 44/1060 (4%)
Strand=Plus/Plus
Query 309 GGTCCGTTTATGGAAGCTCCGGATTACAGAAACGGCAAGGAGTGTGTGTCGTC-ATCAG- 366
||| |||| ||||||||||||| |||||||||||||||||||| ||||| || ||| |
Sbjct 283 GGT-CGTTCGTGGAAGCTCCGGAGTACAGAAACGGCAAGGAGTGCGTGTC-TCAATC-GT 339
Query 367 TGAACAGAGACAACTTCGTGTCGTCTTCTTCTAATGATC-CTTCGCTT-GTTCACATAGC 424
|||||||||| |||||||||||||| | | | || | ||||| || ||||| ||||
Sbjct 340 TGAACAGAGAAAACTTCGTGTCGTC-T-TGC----GA-CGCTTCG-TTAGTTCATGTAGC 391
Query 425 TATGAC-TTTGGATTCAGAGTATC-TCCGTGGATCAATCGCAGCCGTTCATTCTGTTCTC 482
|||||| || || || ||||| | | ||||| |||||||||||||| ||||| | |||
Sbjct 392 TATGACGCTT-GACTCGGAGTA-CTTACGTGGCTCAATCGCAGCCGTACATTCAATGCTC 449
Query 483 CGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAGTTTGACTCG 542
||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||| ||
Sbjct 450 CGCCACGCGTCGTGTCCAGAAAACGTCTTCTTCCATCTCATCGCTGCAGAGTTTGACCCG 509
Query 543 GCGAGTCCTCGTGTGCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGCTGAACTTTAAA 602
|||||||| || || |||||||||||||| | || ||||| || ||||| ||||| |||
Sbjct 510 GCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGTCGCTAAACTTCAAA 569
Query 603 GTCTACATTTAT-AGGGAAGATACGGTGATCAATCTCATATCGTCGTCGATTAGACAAGC 661
|||||||||| | ||||||||||||||||||| || || || || || || ||||||||
Sbjct 570 GTCTACATTT-TCCGGGAAGATACGGTGATCAACCTTATCTCTTCTTCAATCAGACAAGC 628
Query 662 TTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGATCGAAGCGT 721
||| |||||||| |||||||||||||||||||| ||||||||||||||||||| | ||||
Sbjct 629 TTTAGAGAATCCATTGAACTATGCTCGGAACTACCTCGGAGATATTCTTGATCCATGCGT 688
Query 722 GGAAC-GAGTCATTTATCTTGACTCAGATGTTATAAC-T-GTTGATGATATCACAAAGCT 778
| || |||||||||| || ||||| || | || | | || ||||| || ||||||||
Sbjct 689 AG-ACAGAGTCATTTACCTAGACTCGGACATCAT--CGTCGTCGATGACATAACAAAGCT 745
Query 779 TTGGAACACG-GTTTTGACCGGGTCACGGGTTATCGGAGCTCCGGAGTATTGTCACGCGA 837
|||||||||| | |||||| |||||| | | |||||||||||||||||||||||||| |
Sbjct 746 TTGGAACACGAG-TTTGACAGGGTCAAGAATCATCGGAGCTCCGGAGTATTGTCACGCTA 804
Query 838 ACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTACCGGGTCTAATCT 897
||||||| |||| |||||||| || |||||||| |||||||||||||| ||| | |||
Sbjct 805 ACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCGGTTTCTTCT 864
Query 898 CGGGTCAAAAACCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTAAGATGGA 957
|||||| ||| ||||| ||||||||||| || ||||||||||||||||| || |||||||
Sbjct 865 CGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTAGTTAGATGGA 924
Query 958 GAGAAGGGAATTACAGAGAGAAGCTAG-AGCAATGGATGCA-ATTGCAGAAGAAGAAGAG 1015
||||||| || |||||||| ||||| | | | |||||||| | | ||||||||||||||
Sbjct 925 GAGAAGGAAACTACAGAGAAAAGCTTGAAAC-TTGGATGCAGA-TACAGAAGAAGAAGAG 982
Query 1016 AATCTACGATCTT-GGATCATTACCACCGTTTCTT-TTGGTGTTTGCTGGTAATGTTGAA 1073
|||||||||| || || || || || ||||||||| || || || || || || ||||||
Sbjct 983 AATCTACGAT-TTGGGTTCTTTGCCTCCGTTTCTTCTT-GTCTTCGCAGGGAACGTTGAA 1040
Query 1074 GCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGAAGTTGT 1133
|| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1041 GCAATTGATCATAGGTGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGGAAGTTGT 1100
Query 1134 CGGTCATTGCATCCTGGTCCTGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1193
|||| |||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 1101 AGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1160
Query 1194 GTTAGACTTGATGAGAAGAGACCTTGTCCGTTGGATCATCTT-TGGGAGCCATATGATTT 1252
|| |||||||||||||||||||| ||||||||||||||| || ||||| || ||||||||
Sbjct 1161 GTGAGACTTGATGAGAAGAGACCGTGTCCGTTGGATCAT-TTATGGGAACCGTATGATTT 1219
Query 1253 GTATAAACATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTT-GGGTT-TGCTTCTCTG 1310
||| | ||||||||||| |||||||||||||||||| || || ||||| | ||||| ||
Sbjct 1220 ATATGAGCATAAGATTGAAAGAGCTAAAGATCAGTCTTTG-TTCGGGTTCT-CTTCTTTG 1277
Query 1311 TCGGAGTTGACTGATGATTCAAGCTTTTTGTGA-GAGTTT 1349
|| ||||| || || |||||||||||||| ||| ||||||
Sbjct 1278 TCTGAGTTAACAGAAGATTCAAGCTTTTTCTGAAGAGTTT 1317
> AT1G02720.1 | Symbols: GATL5 | galacturonosyltransferase 5 |
chr1:591826-594236 FORWARD LENGTH=1775
Length=1775
Score = 148 bits (80), Expect = 1e-34
Identities = 351/475 (74%), Gaps = 46/475 (10%)
Strand=Plus/Plus
Query 810 ATCGGAGCTCCGGAGTATTGTCACGCGAACTTCACTCAGTATTTCACTTCCG-GGTTCT- 867
||||||||||||||||||||||||||||| ||||| | || ||||| | | |||| |
Sbjct 914 ATCGGAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATACTTCAC--CGGAGGTTTTT 971
Query 868 GGTCAGACCCG-GCTTTACCGGGTC-TAATCTC-GGGTCAAAAACC-TTGCTATTTCAAC 923
||||||| | | |||| |||| | | || ||| | |||| ||| || |||||
Sbjct 972 GGTCAGATAAGAGGTTTAACGGGACGT--TCAAAGGG--AGGAACCCTTGTTACTTCAAT 1027
Query 924 ACAGGAGTGATGGTGATGGATCTTGTAAGA--TGGAGAGAAGGGAA-TT-ACAGAGA-GA 978
|| || || |||||||| ||| ||| |||| |||||| || | || || || | ||
Sbjct 1028 ACTGGTGTAATGGTGATTGAT-TTG-AAGAAGTGGAGACAATTTAGGTTCAC-GAAACGA 1084
Query 979 AGCTAGAGCAATGGATGCA-ATTGCAGAAGA-AGAAGAGAATCTACGATCTTGGATCA-T 1035
| | ||| |||||||| | ||| ||||||| ||| ||| || || || ||||| || |
Sbjct 1085 AT-T-GAGAAATGGATGGAGATT-CAGAAGATAGA-GAGGATTTATGAGCTTGGTTCTCT 1140
Query 1036 TACCACCGTTTCTTTTGGTGTTTGCTGGTAATGTTGAAGCTATTG-ATCATAGATGGAAC 1094
| || ||||||||| |||| ||||||||| |||| | | ||| | ||| | |||||
Sbjct 1141 T-CCTCCGTTTCTTCTGGTATTTGCTGGTCATGTAGCTCCGATTTCA-CATCGGTGGAAT 1198
Query 1095 CAACATGGT-TTAGGAGGAGACAATAT-ACGAGGAAGTTGTCGGTCATT-GCATCCTGGT 1151
|||||||| || || || || ||| | | |||| ||||| || | ||| |||| |||||
Sbjct 1199 CAACATGGGCTT-GGTGGTGATAATGTTA-GAGGTAGTTGCCG-TGATTTGCATTCTGGT 1255
Query 1152 CCTGTGAGTTTG-TTGCATTGGAGTGGTAAAGGTAAGCCATGGGTTA-GACTTGATGAGA 1209
|||||||||||| || || ||| |||| |||||||||||| ||| |||| ||| |
Sbjct 1256 CCTGTGAGTTTGCTT-CACTGGTCAGGTAGTGGTAAGCCATGG-TTAAGACTCGATTCCA 1313
Query 1210 AGAGACCTTGTCCGTTGGATCATC-TT-TGGG-AGCCATATGATTTGTATAAACA 1261
|| || ||||| || || || | || |||| | || |||||||||||||||||
Sbjct 1314 AGCTTCCATGTCCTTTAGA-CA-CATTGTGGGCA-CCTTATGATTTGTATAAACA 1365
> AT4G02130.1 | Symbols: GATL6, LGT10 | galacturonosyltransferase
6 | chr4:944367-947085 REVERSE LENGTH=1693
Length=1693
Score = 128 bits (69), Expect = 2e-28
Identities = 307/416 (74%), Gaps = 40/416 (10%)
Strand=Plus/Plus
Query 810 ATCGGAGCTCCGGAGTATTGTCACGCGAACTTCACTCAGTATTTCACTTCCG-GG-TTCT 867
||||||||||||||||||||||||||||| ||||| | || ||||| | | || ||||
Sbjct 861 ATCGGAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATACTTCAC--CGGAGGATTCT 918
Query 868 GGTCAGACCCG-GCTT-TACCGGGT-C-TAATCTCGGGTCAAAAACCTTGCTATTTCAAC 923
|||| || | | || | |||| | | | | ||| || || || || ||||||
Sbjct 919 GGTCGGAGGAGAGATTCT-CCGG-TACCTT-TAGAGGGAGGAAG-CCATGTTACTTCAAC 974
Query 924 ACAGGAGTGATGGTGATGGATCTTGTAAGA--TGGAGA-GAAG-GGAATTACA-GAGA-G 977
||||| ||||||||||| |||||| |||| |||||| || | || ||||| || | |
Sbjct 975 ACAGGTGTGATGGTGATAGATCTT--AAGAAATGGAGAAGAGGTGG--TTACACGAAACG 1030
Query 978 AAGCTAGAGCAATGGATGCA-ATTGCAGAAGAAGA-AGAGAATCTACGATCTTGGATCA- 1034
| | ||| |||||||| | ||| |||| ||||| |||| || ||||| || || ||
Sbjct 1031 TATCGAGA--AATGGATGGAGATT-CAGA-GAAGAGAGAGGATTTACGAACTAGGCTCGC 1086
Query 1035 TTACCACCGTTTCTTTTGGTGTT-TGCTGGTAATGTTGAAGCTAT-TGATCATAGATGGA 1092
|| |||||||||||| | || || | | ||| | || | | || | ||| | ||||
Sbjct 1087 TT-CCACCGTTTCTTCTAGTTTTCTCC-GGTCACGTGGCTCCCATCTC-TCACCGGTGGA 1143
Query 1093 ACCAACATGGT-TTAGGAGGAGACAATAT-ACGAGGAAGTTGTCGGTCATT-GCATCCTG 1149
|||| ||||| || || || |||||| | | |||| || ||||| | ||| ||||||||
Sbjct 1144 ACCAGCATGGACTT-GGTGGTGACAATGTTA-GAGGTAGCTGTCG-TGATTTGCATCCTG 1200
Query 1150 GTCCTGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGGGTTAGACTTGAT 1205
|||||||||||||| |||||||| ||||| || ||||| ||| | ||||| |||
Sbjct 1201 GTCCTGTGAGTTTGCTGCATTGGTCTGGTAGTGGCAAGCCCTGGATAAGACTCGAT 1256
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78413251290
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5