BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472680
Length=4277
Score E
Sequences producing significant alignments: (Bits) Value
AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:... 6216 0.0
AT1G70060.1 | Symbols: SNL4 | SIN3-like 4 | chr1:26383244-26389... 1256 0.0
AT1G24200.1 | Symbols: | Paired amphipathic helix (PAH2) super... 442 1e-122
> AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:8563558-8570505
REVERSE LENGTH=4441
Length=4441
Score = 6216 bits (3366), Expect = 0.0
Identities = 3955/4236 (93%), Gaps = 53/4236 (1%)
Strand=Plus/Plus
Query 17 GCTCTGTTCAACTTCAAACACCATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAA 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GCTCTGTTCAACTTCAAACACCATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAA 186
Query 77 TGACGCGCTTGCATACCTTAAAGCCGTGAAGGATAAATTTCAGGATCAACGTGAAAAATA 136
||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 187 CGACGCTCTTGCATATCTTAAAGCCGTGAAGGACAAATTTCAGGATCAACGTGGAAAATA 246
Query 137 CGACGAGTTTCTTGAGGTCATGAAGAATTTTAAGTCTCATCGAGTTGATACAGCTGGTGT 196
||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct 247 TGACGAGTTTCTCGAGGTTATGAAGAATTTTAAATCTCAAAGAGTTGATACAGCTGGTGT 306
Query 197 GATAACAAGAGTAAAAGAACTTTTCAAAGGGCACCAAGAGTTAATATT-GGGTTTCAATA 255
|||||| || |||||||||||||||||||| ||||||||||| || || |||||| ||||
Sbjct 307 GATAACTAGGGTAAAAGAACTTTTCAAAGGACACCAAGAGTTGATTTTGGGGTTT-AATA 365
Query 256 CCTTCTTGCCAAAGGGTTTTGAGATCACACTCCAACCTGAAGATGGACAACCTCCACTAA 315
| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 366 CTTTCTTGCCTAAGGGTTTTGAGATCACACTTCAACCTGAGGATGGACAACCTCCACTGA 425
Query 316 AGAAACGCGTTGAGTTTGAGGAAGCAATTAGTTTTGTTAACAAGATTAAGACAAGGTTTC 375
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 426 AGAAACGTGTTGAGTTTGAGGAAGCTATTAGCTTTGTTAACAAGATTAAGACAAGGTTTC 485
Query 376 AGGGCGACGATCGTGTATACAAATCATTTTTAGACATTTTAAACATGTACAGAAAGGATA 435
|||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 486 AGGGAGATGATCGTGTATACAAATCATTTTTAGACATTTTAAACATGTACAGAAGGGATA 545
Query 436 GCAAGTCCATAACTGAAGTCTACCAGGAGGTTGCCG-TCCTATTTCGGGATCATACGGAT 494
|||||||||| ||||| |||||||||||||||| || ||||||||||||||||| | |||
Sbjct 546 GCAAGTCCATCACTGAGGTCTACCAGGAGGTTG-CGATCCTATTTCGGGATCATTCAGAT 604
Query 495 TTGCTTGTAGAGTTTACTCACTTTCTGCCTGATACTTCAGCAACACCCTCTATT-CATTC 553
|||| || ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct 605 CTGCTCGTGGAGTTTACTCACTTTCTACCTGATACTTCAGCAACGGCCTCTATTCCA-TC 663
Query 554 TGTGAAAACTTCAGCTCGCGACAGAGGGATGTCTCTGCCTGATAAGAAGGACCGGATCAT 613
||| |||||||||| ||| || |||||| | |||||| ||||||||||||||||||||||
Sbjct 664 TGTTAAAACTTCAGTTCGTGAGAGAGGGGTTTCTCTGGCTGATAAGAAGGACCGGATCAT 723
Query 614 TACTCCACATCCTGACCATGACTATGGTACTGAACATA-T-----GGACCGGGAGAGACC 667
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 724 TACTCCACATCCTGACCATGACTATGGTACTGAACATATTGACCAGGACCGGGAGAGACC 783
Query 668 TATGAAGAAAGAAAATAAAGAACACATGAGAGGTAATAACAACGAAAATGAGCAGAGGGA 727
||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct 784 TATTAAGAAAGAAAATAAAGAACACATGAGAGGTACTAACAAAGAAAATGAGCATAGGGA 843
Query 728 TGCCAGAGATTTCGAACCTGATAGCAAAAAAGAGCAGTTTCTCAACAAGAAGCAGAAAAT 787
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct 844 TGCCAGAGATTTCGAACCACATAGCAAAAAAGAGCAATTTCTCAACAAGAAGCAGAAACT 903
Query 788 ACATATTAGAGGCGGTGATTTTGCTGAAATTTCCAATCAAGTCAGGGAAGGGAATAAATT 847
|||||||||||||| |||| ||||||||||| | ||| ||| || | |||| |
Sbjct 904 ACATATTAGAGGCGATGATCCTGCTGAAATTT-C---CAA-TCA---AA--G--TAAACT 951
Query 848 TTTTGGAGCGGTTCCTAGTTCATCTACTTATGATGAAAAAGGTGCCATGAAAAGTTACAG 907
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 TTCTGGAGCGGTTCCTAGTTCATCTACTTATGATGAAAAAGGTGCCATGAAAAGTTACAG 1011
Query 908 TCAAGATCTAGCTATTGTCGATAGAGTAAAGGGAAAGCTTAATGCATCCGAGTACCAGGA 967
|||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||
Sbjct 1012 TCAAGATCTAGCTATTGTCGATAGAGTAAAGGAAAAGCTTAACGCCTCAGAGTACCAGGA 1071
Query 968 GTTTTTACGTTGCCTTAATCTCTTTTCGAAAGAAATAATCAGCCGACCAGAATTGCAATC 1027
|||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||
Sbjct 1072 GTTTTTACGTTGTCTTAATCTCTTTTCAAAAGAGATAATCAGCCGACCAGAACTGCAATC 1131
Query 1028 TTTGGTAGGAAATTTAATTGGAGTATATCCTGACCTCATGGATTCCTTTATAGAGTTTTT 1087
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 TTTGGTAGGGAATTTAATCGGAGTATATCCTGACCTCATGGATTCCTTTATAGAGTTTTT 1191
Query 1088 GGTGCAATGCGAAAAGACTGAAGGACTGCTCTCTGGTATTCTGACTAAGA--AA---T-C 1141
||||||||| ||||||| |||||||||||||||||||||||||||||||| || | |
Sbjct 1192 GGTGCAATGTGAAAAGAATGAAGGACTGCTCTCTGGTATTCTGACTAAGAGTAAGTCTAC 1251
Query 1142 ----CTTGTG-GA-GTGAAGGCAAATATCCTCAACCATCACTGGACAATGATAGAGACCA 1195
||| || | |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1252 TTATCTTTTGCAAGGTGAAGGCAAATATCCTCAACCGTCACTGGACAATGATAGAGACCA 1311
Query 1196 AGAACATAAGAGAGATGACGGGTTTAGAGACAGAGATCATGATAAGGAAAGGCTTGAAAA 1255
||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||
Sbjct 1312 GGAACATAAGAGAGATGACGGGCTTAGAGATAGAGATCATGAAAAGGAAAGGCTTGAAAA 1371
Query 1256 AGCAGCTGCAAATCTGAAATGGGCAAAGCCAATCAGTGAACTAGATCTCTCGAACTGTGA 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 AGCAGCTGCAAATCTGAAATGGGCAAAGCCAATCAGTGAACTAGATCTCTCGAACTGTGA 1431
Query 1316 ACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTATTGCAAGCCA 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 ACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTATTGCAAGCCA 1491
Query 1376 GAAGACAGAGCTCGGTAAACTGGTTCTTAACGATCACTGGGTCTCCGTCACATCAGGAAG 1435
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1492 GAAGACAGAGATCGGTAAACTGGTTCTTAATGATCACTGGGTCTCCGTCACATCAGGAAG 1551
Query 1436 TGAAGATTATTCATTTAGCCACATGCGCAAGAACCAGTATGAAGAGAGCCTCTTCAAATG 1495
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1552 TGAAGATTATTCATTTAGCCACATGCGTAAGAACCAGTATGAAGAGAGCCTCTTCAAATG 1611
Query 1496 TGAAGATGACAGGTTTGAGCTAGATATGCTATTAGAGTCTGTGAATTCAACTACAAAGCA 1555
||| ||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct 1612 TGAGGATGACAGGTTTGAGCTGGACATGCTATTAGAGTCTGTAAATTCAACGACAAAGCA 1671
Query 1556 TGTGGAAGAATTACTGGCAAAGATTAACAGTAATGAACTGAAAACCAACAGCCCCATCCG 1615
||||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1672 TGTGGAAGAATTATTGACAAAAATTAACAGTAATGAACTGAAAACCAACAGTCCCATCCG 1731
Query 1616 TGTCGAGGATCACCTCACAGCTCTAAACCTAAGATGCATAGAACGTTTATATGGTGATCA 1675
|||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||
Sbjct 1732 TGTCGAGGATCACCTCACAGCTCTAAACTTAAGATGCATAGAACGGTTGTATGGTGATCA 1791
Query 1676 CGGGCTCGATGTGATGGATGTGTTAAAGAAGAACGTGTCTCTTGCATTACCTGTTATCCT 1735
|||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 1792 CGGGCTCGATGTGATGGATGTGCTGAAGAAGAACGTGTCTCTTGCTTTACCTGTTATCCT 1851
Query 1736 AACACGTTTGAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTGACAAAGT 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1852 AACACGTTTGAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTGACAAAGT 1911
Query 1796 CTGGGCTGACATATATGCTAAGAATTACTACAAATCGCTTGATCATCGAAGTTTCTACTT 1855
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1912 CTGGGCTGAGATATATGCTAAGAATTACTACAAGTCGCTTGATCATCGAAGTTTCTACTT 1971
Query 1856 CAAACAGCAGGATTCGAAGA-GTCTCAGCATGAAAGCTTTGTTGGCAGAGATAAAAGAGA 1914
||||||||||||||| |||| | || ||||||||||| ||||||||||||||||||||||
Sbjct 1972 CAAACAGCAGGATTCAAAGAAG-CTGAGCATGAAAGCATTGTTGGCAGAGATAAAAGAGA 2030
Query 1915 TCACTGAAAAGAAGCGAGAGGATGATTCACTTCTTGCATTTGCAGCCGGAAATAGACTAT 1974
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2031 TTACTGAAAAGAAGCGAGAGGATGATTCACTTCTTGCATTTGCAGCCGGAAATAGACTAT 2090
Query 1975 CCATTTCCCCAAATTTGGAGTTTGATTATCCGGATCCTGACCTGCATGAAGATCTCTACC 2034
||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct 2091 CCATTTCCCCAGATTTGGAGTTTGATTATCCGGATCATGACCTTCATGAAGATCTTTACC 2150
Query 2035 AGCTGATCAAATATTCTTGTGCAGAAATGTGCTCTACTGAACAGTTAGATAAGGTAATGA 2094
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2151 AGCTGATCAAATATTCGTGTGCAGAAATGTGCTCTACCGAACAGTTAGATAAGGTAATGA 2210
Query 2095 AGATTTGGACAACCTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCTG 2154
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2211 AGATTTGGACAACTTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCTG 2270
Query 2155 AAGACCAAGAAGACGTTGTCAAGTCCATAAACCAGAATGTAAAAAGCGGTAGTTCAAGTG 2214
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 2271 AAGACCAAGAAGACGTTGTCAAGTCCATGAACCAGAATGTAAAGAGCGGTAGTTCAAGTG 2330
Query 2215 CTGGCGAGAGCGAGGGAAGTCCTCACAATTACGCTAGTGTTGCCGACTCTAGACGCTCAA 2274
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2331 CTGGCGAGAGTGAGGGAAGTCCTCACAATTACGCTAGTGTTGCCGACTCTAGACGCTCAA 2390
Query 2275 A-TACATCTCAAAAAGCTAATGAACATAATCAGTTGGGGCAACCTAGTAATTTGGTGAGG 2333
| | |||||| ||||||||||||||||| ||||||||||||| ||||||||| || ||||
Sbjct 2391 AGT-CATCTCGAAAAGCTAATGAACATAGTCAGTTGGGGCAAACTAGTAATTCGGAGAGG 2449
Query 2334 AATGGCGCTGCTGTTAGGATTTCAGATGCCTTATGTGAGACTGCTCAGCATGAGAAAATG 2393
||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2450 GATGGCGCCGCTGGTAGGACATCAGATGCCTTATGTGAGACTGCTCAGCATGAGAAAATG 2509
Query 2394 CTGAAGAATGTAGTTACGTCTGGTGAAAGGCCTGAAAGCAAACAAGCTGTTTCTATTGAG 2453
|||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||
Sbjct 2510 CTGAAGAATGTAGTTACGTCTGATGAAAAGCCTGAAAGCAAGCAAGCTGTTTCTATTGAG 2569
Query 2454 CATGTACACGAATCAACTGCTCTCGCTGTGGATGGATTATTAGACCAAAGTAATGGAGGA 2513
| || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2570 CGTGCACACGATTCAACTGCTCTCGCTGTGGATGGATTATTAGATCAAAGTAATGGAGGA 2629
Query 2514 AGCAGTATAGTACACATGACCGGGCATAACAATAATAATCTGAAGCCTGTGACCTGTGGA 2573
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 2630 AGCAGTATAGTACACATGACCGGACATTGCAATAATAATCTGAAGCCTGTGACCTGTGGA 2689
Query 2574 ACAGAGTTGGAGTTGAAGATGGATGATGGAAATGGGCCAAAATTAGAGGTTGGTAACAAG 2633
||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 2690 ACAGAGTTGGAGTTGAAAATGAATGATGGTAATGGGCCAAAATTAGAGGTTGGTAACAAG 2749
Query 2634 A-GATTATTGTCAAATGGGATCTCGGTAGAAATAACAAGTAACCAAGAGTTGGCAGGGA- 2691
| | |||||| ||||||||||| ||||||||||||||||| |||||||| ||||||| |
Sbjct 2750 AAG-TTATTGACAAATGGGATCGCGGTAGAAATAACAAGTGACCAAGAGATGGCAGGAAC 2808
Query 2692 ATTCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCCCAATGGAGACTTTGAGGAAGATA 2751
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2809 AT-CCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCCAAATGGAGACTTTGAGGAAGATA 2867
Query 2752 ATTTTGCAGTTTATGAAAAAACTGGTTTGGAGACCACCAGCAAAGCGAATGATAATACTG 2811
||||||||||||||| |||||||| ||| |||||| ||||||||||||||||| |||||
Sbjct 2868 ATTTTGCAGTTTATGCAAAAACTGATTTTGAGACCTTCAGCAAAGCGAATGATAGTACTG 2927
Query 2812 GAAATAACATTAGCGGAGATAGAAGTAGAGAAGGGGAACCATCTTGTCTGGAGACAGGGG 2871
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2928 GAAATAACATTAGCGGAGATAGAAGTAGAGAAGGGGAACCATCTTGTCTGGAGACAAGGG 2987
Query 2872 CTGAGAATGATGGTGAAGGTGTCGAAAACGCCGCAAGATCATCAGAGGACAGCAGAAATG 2931
|||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2988 CTGAGAATGACGCTGAAGGTGACGAAAACGCCGCAAGATCATCAGAGGACAGCAGAAATG 3047
Query 2932 CATATGAGAACGGTGATGTTTCTGGAACGGAGTCTGGTGGTGGTGAAGGTCCGGAGGATG 2991
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 3048 AATATGAGAACGGTGATGTTTCTGGAACGGAATCTGGTGGTGGTGAAGATCCGGAGGATG 3107
Query 2992 ATTTGGATCGCAATAGTAAGGGAGAAAGCGAATGCGAGGCTGAAGGTATGGCTGATGCAC 3051
|||||||| ||||| || |||||||||||| | ||||||||| |||||||||||||||
Sbjct 3108 ATTTGGATAACAATAACAAAGGAGAAAGCGAAGGTGAGGCTGAATGTATGGCTGATGCAC 3167
Query 3052 ATGATGCTGAAGAAGATGGGTCTGCCTTACCCTTTTCAGCACGATTCTTACTGCATGTAA 3111
|||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 3168 ATGATGCTGAAGAAAATGGGTCTGCCTTACCCGTTTCAGCACGATTCTTGCTGCATGTAA 3227
Query 3112 AGCCCTTAGCAAAGTATGTTCCTTCAACTATAGCTTTGCATGACAAGGAGAAAGACTCTC 3171
||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 3228 AGCCCTTAGTAAAGTATGTTCCTTCAGCTATAGCTTTGCATGACAAGGACAAAGACTCTC 3287
Query 3172 TGAAGAACTCCCAAGTCTTCTATGCAAATGATTCATTTTACGCGCTTTTCAGGCTGCACC 3231
|||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct 3288 TGAAGAACTCCCAAGTTTTCTATGGAAATGATTCGTTTTACGTGCTTTTCAGGCTGCACC 3347
Query 3232 GAATATTGTACGAGAGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAGGGAAAGT 3291
| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3348 GGATATTGTATGAGAGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAAGGAAAGT 3407
Query 3292 GGAGGACCTCAAATACCAAAAATCCTACTGATTCCTATGCCAGATTCATGACTGCTCTCT 3351
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 3408 GGAGGACCTCAAATACCAAAAATCCTACTGATTCCTATGCTAGATTCATGACTGCACTCT 3467
Query 3352 ACAACTTACTTGATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAGCGATAA 3411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3468 ACAACTTACTTGATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAGCGATAA 3527
Query 3412 TCGGGACTCAGTCGTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCATCAAGC 3471
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3528 TCGGGACTCAGTCTTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCATCAAGC 3587
Query 3472 ATCTCCAAGGAGTAGCAGCTGATGAGATGGACAACAAACTTCTGCAGCTTTATGCATATG 3531
|||| |||| ||||| ||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct 3588 ATCTACAAGTAGTAGTAGCTGATGAGATGGACAACAAGCTTCTTCAGCTTTATTTTTATG 3647
Query 3532 AGAAATCCAGAAGGCCTGAAACGATTTTTGATGCTGTTTATTACGATAATGCCCGTGTCC 3591
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 3648 AGAAATCCAGAAGGCCTGAAACGATTTTTGATGCTGTGTATTACGATAATACCCGTGTCC 3707
Query 3592 TTCTCCCTGATGAGAATATTTACCGTATTGAATGTAAATTATCAACCCCAGCCAAACTCT 3651
| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 3708 TCCTCCCTGATGAGAATATTTACCGTATTGAATGTAGATTATCAACCCCAGCGAAACTCT 3767
Query 3652 CTATTCAGCTTATGTGCAACGGCCTTGAAAAGCCCGATGTGACATCTGTATCCATTGACC 3711
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 3768 CTATTCAGCTTATGTGCAACGGTCTTGATAAGCCCGATGTGACATCTGTATCCATTGACC 3827
Query 3712 CGACCTTTGCAGCTTACCTCCGCAATGACTTCCTCTCCGTACAATCGAATGCAAGGGAGG 3771
|||||||||||||||| |||| |||||||||||||||| ||||| | |||||||||||||
Sbjct 3828 CGACCTTTGCAGCTTATCTCCACAATGACTTCCTCTCCATACAACCAAATGCAAGGGAGG 3887
Query 3772 ATCGTAGAATCTATTTAAATAGGAACAAGCGCAAAGTTTGTGGTAAAGATGAACAGTTAT 3831
|||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 3888 ATCGCAGAATCTATTTAAATAGGAACAAGCGCAAAGTTTGTCGTGAAGATGAACAGTTAT 3947
Query 3832 ACAGCACAGATGGAGTTAAGATTAAAAATGGGTTGGAGTGTAAGATAGCCTGCGGTTCTT 3891
|||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct 3948 ACAGCACAGATGAAGTTAAGATCAAAAATGGTTTGGAGTGTAAGATAGCTTGCGGTTCTT 4007
Query 3892 CAAAGGTCTCCTATGTATTAGAAACAGAAGATTTGTTGGTGCGAGTTAAAAAGAGAAGAA 3951
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4008 CAAAGGTCTCCTATGTACTAGAAACAGAAGATTTGTTGGTGCGAGTTAAAAAGAGAAGAA 4067
Query 3952 AAACTGTGCGCTACAATGAGCATTCTTGGGTATGGCAAATGAGGTTACAATGTTACCAAA 4011
||||| || || ||||| || ||||||||||| |||||||||||||||||| |||| |||
Sbjct 4068 AAACTTTGTGCCACAATCAGGATTCTTGGGTAAGGCAAATGAGGTTACAATATTACAAAA 4127
Query 4012 CGAACTTCTTGTGACCAGACTGTAACAATCTGGAAGAAGGATACCAAATCAACTCAACTT 4071
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 4128 ATAACTTCTTGTGACCAGCCTGTAACAATCTGGAAGAAGGATACCAAATCAACTCAACTT 4187
Query 4072 GTTCATTCA-T-TC-A--TTCTCC-A-ACTTAACAGAGACAAAAGTGGCAATTCTCCATT 4124
||||||||| | || | || | | || |||| | ||||||||||||||||||||||
Sbjct 4188 GTTCATTCACTCTCCAACTTAACAGAGACAAAACAAAAACAAAAGTGGCAATTCTCCATT 4247
Query 4125 GTTGACTTCACCGGATAAAGCCAAATTGCATTCTCTTTGTTCATGAGAAGAA-A-GCAAC 4182
||||||||||||||||| ||||||| |||||||||| | ||||| ||||||| | |||||
Sbjct 4248 GTTGACTTCACCGGATAGAGCCAAACTGCATTCTCTATCTTCATAAGAAGAAGAAGCAAC 4307
Query 4183 AAAGGATTTGGCTTTTTGTTGTCTGTGACAGAAAAA 4218
||||||||||||||||||||||||||||| ||||||
Sbjct 4308 AAAGGATTTGGCTTTTTGTTGTCTGTGACTGAAAAA 4343
> AT1G70060.1 | Symbols: SNL4 | SIN3-like 4 | chr1:26383244-26389916
FORWARD LENGTH=4483
Length=4483
Score = 1256 bits (680), Expect = 0.0
Identities = 1638/2080 (79%), Gaps = 147/2080 (7%)
Strand=Plus/Plus
Query 747 GATAGCAAAAAAGAGCAGTTTC-TCAACAAG-AAGCAGAAAATACATA-TTAGAGG-CGG 802
|||||| | ||||| || |||| ||||| || || || |||| ||| || ||| |
Sbjct 917 GATAGCCATAAAGAACA-TTTCTTCAAC-AGCAAAAAG-AAATTGATACGTA-AGGATGA 972
Query 803 TGATTTTGCTGAAATTTCCA-ATCAAGTCAGGGAAGGGA-ATAAATTTTTTGGAGCGGTT 860
||||| ||||||||| | || |||||| ||||||| ||| | || |||| |||||| ||
Sbjct 973 TGATTCTGCTGAAATGT-CAGATCAAGCCAGGGAA-GGAGACAAGTTTTCTGGAGCCATT 1030
Query 861 CCTAGTTCATCTACTTATGATGAAAAAGGTGCCATGAAAAGTTACAGTCAAGATCTAGCT 920
|| ||||||||||||||||||||||||||| ||| || | ||||| || |||
Sbjct 1031 CCGAGTTCATCTACTTATGATGAAAAAGGT--CAT----AG---C---CAAGAACTTGCT 1078
Query 921 ATTGTCGATAGAGTAAAGGGAAAGCTTAATGCATCCGAGT-ACCAGGAGTTTTTACGTTG 979
|||| |||||||| |||| ||||||| || | | || | |||| ||||| ||||| ||
Sbjct 1079 TTTGTTGATAGAGTGAAGGCAAAGCTTGATACCGCGGA-TAACCAAGAGTTCTTACGATG 1137
Query 980 CCTTAATCTCTTTTCGAAA-GAAATAATCAGCCGACCAGAATTGCAATCTTTGGTAG-GA 1037
|||||||||| ||| ||| || |||||||||| |||||||||||| |||||||| | |
Sbjct 1138 TCTTAATCTCTATTC-AAAGGAGATAATCAGCCAACCAGAATTGCAGTCTTTGGT-GAGT 1195
Query 1038 AATTTAATTGGAGTATATCCTGACCTCATGGATTCCTTTATAGAGTTTTTGG-TGCAATG 1096
|||||||||| |||||||| ||||| ||||| |||| | || ||||||| | || ||
Sbjct 1196 GATTTAATTGGTGTATATCCAGACCTTATGGACGCCTTCAAAGTCTTTTTGGCT-CAGTG 1254
Query 1097 CGAAAAGACTGAAGGACTGCTCTCTGGTATTC-TGACTAAGAAATCCTTGTGGAGTGAAG 1155
|| |||| ||| ||| | |||||||||| || || ||||||||||||||||||||||||
Sbjct 1255 TGACAAGAATGATGGATTACTCTCTGGTA-TCGTGTCTAAGAAATCCTTGTGGAGTGAAG 1313
Query 1156 GCAAATATCCTCAA-C--C--A-TCACTGGACAATGATAGAGACCAAGAACATAAGAGAG 1209
|||||| ||||||| | | | ||||| ||||| |||| ||||| ||||| | ||| ||
Sbjct 1314 GCAAATGTCCTCAACCTACTAAGTCACTTGACAAAGATACAGACCGAGAACGTGAGA-AG 1372
Query 1210 A-TGACGGGTTTAGAGACAGAGATCATGATAAGGAAAGGCTTGAAAAAGCAGCTGCAAAT 1268
| ||| ||| |||||| ||||| | ||| ||||| ||||||||||| | || || | |
Sbjct 1373 ATTGAAAGGTATAGAGAAAGAGACCGTGAGAAGGAGAGGCTTGAAAAGGTGGCAGCGAGT 1432
Query 1269 CTGAAATGGGC-AAAGCCAATCAGTGAACTAGATCTCTCGAACTGTGAACAATGCACTCC 1327
| ||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1433 CAGAAATGGGCTAAA-CCTATCAGTGAACTAGATCTCTCGAACTGTGAACAGTGCACACC 1491
Query 1328 TAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTATTGCAAGCCAGAAGACAGAGCT 1387
|||||||||| ||||||||||||||| |||||| |||| |||||||| || | ||| |
Sbjct 1492 TAGTTATCGGAGACTTCCAAAGAATTATCCAATTCCTATAGCAAGCCAAAAAATGGAGAT 1551
Query 1388 CGGTAAACTGGTTCTTAACGATCACTGGGTCTCCGTCACATCAGGAAGTGAAGATTATTC 1447
|||| | || ||||| ||||| |||||||| ||||| |||||||||||||| |||||
Sbjct 1552 TGGTAGCCAAGTGCTTAATGATCATTGGGTCTCTGTCACTTCAGGAAGTGAAGACTATTC 1611
Query 1448 ATTTAGCCACATGCGCAAGAACCAGTATGAAGAGAGCCTCTTCAAATGTGAAGATGACAG 1507
||| | ||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1612 ATTCAAACACATGCGCAAGAACCAATACGAAGAGAGCCTATTCAAATGTGAAGATGACAG 1671
Query 1508 GTTTGAGCTAGATATGCTATTAGAGTCTGTGAAT-TCAACTACAAAGC-ATGTGGAAGAA 1565
||| |||||||| ||| |||||||||||||| || || |||| || | | || |||||
Sbjct 1672 GTTCGAGCTAGACATGTTATTAGAGTCTGTG-ATCTCGGCTACTAATCGA-GTTGAAGAG 1729
Query 1566 TTACTGGCAAAGATTAACAGTAATGAACTGAAAACCAACAGC-CCCATCCGTGTCGAGGA 1624
||| ||||||||||||||||||||||| |||||||| | | | |||||| || |||||||
Sbjct 1730 TTATTGGCAAAGATTAACAGTAATGAATTGAAAACCGATA-CTCCCATCTGTATCGAGGA 1788
Query 1625 TCACCTCACAGCTCTAAACCTAAGATGCATAGAACGTTTATATGGTGATCACGGGCTCGA 1684
|||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||
Sbjct 1789 TCACCTCACAGCTCTAAACCTAAGATGCATAGAACGGTTATACAGTGACCATGGGCTCGA 1848
Query 1685 TGTGATGGATGTGTTAAAGAAGAACGTGTCTCTTGCATTACCTGTTATCCTAACACGTTT 1744
|||| ||||| ||||||||||||| | | |||||| ||||| || || ||||| |||||
Sbjct 1849 TGTGTTGGATTTGTTAAAGAAGAATGCATATCTTGCTTTACCGGTAATACTAACCCGTTT 1908
Query 1745 GAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTGACAAAGTCTGGGCTGA 1804
|||||| ||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||
Sbjct 1909 GAAACAAAAGCAAGAAGAATGGGCAAGGTGTCGTACTGAGTTTAACAAAGTCTGGGCTGA 1968
Query 1805 CATATATGCTAAGAATTACTACAAATCGCTTGATCATCGAAGTTTCTACTTCAAACAGCA 1864
||||||| | ||||| ||| ||| |||||||||||||| ||||| || |||||||||||
Sbjct 1969 CATATATACAAAGAACTACCACAGGTCGCTTGATCATCGCAGTTTTTATTTCAAACAGCA 2028
Query 1865 GGATTCGAAGAGTCTCAGCATGAAAGCTTTGTTGGCAGAGATAAAAGAGATCACTGAAAA 1924
|||||| |||| ||| |||| ||||| ||| |||||||||||||||||||| |||||||
Sbjct 2029 GGATTCAAAGAATCTGAGCACAAAAGCATTGCTGGCAGAGATAAAAGAGATCTCTGAAAA 2088
Query 1925 GAAGCGAGA-G--GATGATTCACTTCTTGCAT-TTGCAGCCGGAAATAGACTATCCATTT 1980
|||||||| | |||||| |||||||||| | |||| || |||||||||| | | ||||
Sbjct 2089 GAAGCGAGGCGAAGATGATGCACTTCTTGC-TCTTGCGGCTGGAAATAGACGAACTATTT 2147
Query 1981 CC-CCAAATTTGGAGTTT-GATTATCCGGATCCTGACCTGCATGAAGATCTCTACCAGCT 2038
| |||| | || ||||| ||||||||||||||||| || || |||||||| || |||||
Sbjct 2148 CTTCCAA-TATG-AGTTTTGATTATCCGGATCCTGATCTTCACGAAGATCTGTATCAGCT 2205
Query 2039 GATCAAATATTCTTGTGCAGAAATGTGCTCTACTGAACAGTTAGATAAGGTAATGAAGAT 2098
|||||| ||||| |||| ||||||||| || || |||||||||||||||||||||||| |
Sbjct 2206 GATCAAGTATTCATGTGGAGAAATGTGTTCAACAGAACAGTTAGATAAGGTAATGAAGGT 2265
Query 2099 TTGGACA-ACCTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCTGAAG 2157
|||||| | || |||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 2266 ATGGACAGAATTTT-TGGAACCAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCCGAAG 2324
Query 2158 ACCAAGAAGACGTTGTCAAGTCCATAAACCAGAATGTAAAAAGCGGTAGTTCAAGTGCTG 2217
||| |||||| | ||||||||| | |||||| || | || || ||| |
Sbjct 2325 ACCGAGAAGATGCTGTCAAGTCTACAAACCA---TG-AC----CG--AG---AAGACCAA 2371
Query 2218 GCGAGA-GCGAGGGAAGTCCTCACAATT-ACGCTAGTGTTGCCGACTCTA-GACGCTCAA 2274
| ||| || | | ||||||| ||| | |||||| ||||| |||||| | || ||||
Sbjct 2372 GA-AGATGCT-GTCA-GTCCTCAAAATGGA-GCTAGTATTGCCAACTCTATG-CGGTCAA 2426
Query 2275 ATA-CATCTCAAAAAG-CTAATGAACA-TAATCA-GTTGGGGCAACCTAGTAATTTGG-T 2329
|| | ||| ||||| | |||||| | |||||| || | ||||| ||||| | |||| |
Sbjct 2427 ATGGCC-CTCGAAAAGTC-AATGAA-AGTAATCAAGT-GCGGCAAGCTAGTGAGTTGGAT 2482
Query 2330 GAGGAATGGCGCTGCT-GTTAGGATTTCAGATGCCTT---ATG-TGAGACTGC--TCAGC 2382
| || || || || || || | ||||||||||| || || ||| | ||||
Sbjct 2483 AAAGA-TGTTACTTCTAGTAAG-ACCTCAGATGCCTTGTTATCATGTGACAACACTCAGA 2540
Query 2383 ATGAGAAAATGCTGAAGAATGT-AGTTACGTCTGGTGAAAG-GCCTGAAAGCAAACAAGC 2440
|||| ||||||| ||||||| | | || ||| ||||| ||| |||| |||||||||
Sbjct 2541 ATGATAAAATGCCGAAGAATCTGACC-ACACCTGACGAAAGAGCC-GAAACCAAACAAGC 2598
Query 2441 TGTTTCTATTGAGCATGTACACGAA-TCAACTGCTCT-CGCTGTGGATGGATTATTAGAC 2498
|||||||||||| | || || || |||| ||| || | || |||||||||| ||| |
Sbjct 2599 TGTTTCTATTGAACGTGCCCAT-AACTCAAATGCACTAC-CTCTGGATGGATTGTTAC-C 2655
Query 2499 -CAAAGTAATGGAGGAA---GCAGTATAGTACACAT-GACCGGGCATAACAATAATAATC 2553
||||| |||||| || ||||| || | | | | | | |||| || ||||| |||||
Sbjct 2656 TCAAAGGAATGGAAAAATCAGCAGTTTA-T-C-CGTTG-CGGGGCTTAGCAATAGTAATC 2711
Query 2554 TGAAGCCTG--TGA-CCTGTGGAACAGAGTTGGAGTTGAAGATGGATGATGGAAATGGGC 2610
|| |||| | | || ||||||| ||| | |||||||| || | | ||||||||
Sbjct 2712 CAAAACCTGCATTAACCAGTGGAACGGAG--G-AGTTGAAGCCAAATTACGTAAATGGGC 2768
Query 2611 CAAAATTAGAGGTTGGTAACAAGAGAT-TATTGTC-AAATGGGATCTCGGTAGAAATAAC 2668
|| ||||| |||| |||| | || | || |||||||| | | ||| |
Sbjct 2769 CACGCGTAGAGATTGGCGACAACCC-TGTAAT-TCCAAATGGGA-CA-G-TAG------C 2817
Query 2669 AAGTAACCAAGAGTTGGCAGGG-AATTCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTC 2727
| | || | ||| || ||| || ||||||| |||||||| || |||||||||||||
Sbjct 2818 A-G-AAT---G-GTTCGCTGGGGAAG-CCAAAGTCGAAAGAGAGGAGGGTGAACTTTCTC 2870
Query 2728 CCA-ATGGAGACTTTGAGGAAGATAATTTTGCAGTTTATG 2766
| | | ||||| ||||| |||||||||| ||||||| |||
Sbjct 2871 CAACA-GGAGATTTTGAAGAAGATAATTATGCAGTTCATG 2909
Score = 704 bits (381), Expect = 0.0
Identities = 841/1056 (80%), Gaps = 59/1056 (6%)
Strand=Plus/Plus
Query 2905 CAAGATCATCAGA-GGACAGCAGAAATGCATATGAGAACGGTGATGTTTCTGGAACGGAG 2963
||||||||||||| || ||| |||| ||| | | |||||||||||||||||||| ||
Sbjct 2979 CAAGATCATCAGATGG-TAGCGGAAACACATCTCACAACGGTGATGTTTCTGGAACTGAC 3037
Query 2964 TCTGGTGGTGGTGAAG---G-T-CCG-GAGGATGATTTGGATCGCAATAGTAAGGGAGAA 3017
||||||| |||||||| | | || || |||||| | || | | ||| ||||| ||||
Sbjct 3038 TCTGGTGATGGTGAAGATTGTTATCGCGAAGATGATATAGA-C-C-ATAATAAGGTAGAA 3094
Query 3018 AGCGAATGCGAGGCT---GAAGGTATGGCTGAT-G-CA-CATGATGCTGAAGAAGATGGG 3071
|| ||| | |||||| ||||||||| ||||| | || ||||| |||||| |||| |
Sbjct 3095 AGTGAAGGTGAGGCTGAAGAAGGTATGTCTGATGGCCATGATGATACTGAAGGAGATATG 3154
Query 3072 TCTGCCTTACCCTTTTCAGCACGATTCTTACTGCATGT-AAAGCC-CTTAGCAAAGTATG 3129
||| || || | |||| | | | | || ||||| ||| || ||| ||||||||||
Sbjct 3155 CCTGTGTTGTCCATCTCAGTAAAAAACCTGCTACATGTGAAA-CCTCTT-GCAAAGTATG 3212
Query 3130 TTCCTTCAACTATAGCTTTGCATGACAAGGAGAA--A-GACTCTCTGAAGAACTCCCAAG 3186
||| || | ||||||| | || ||||| || | || |||| ||||||||| ||||
Sbjct 3213 -TCCCTC--C---AGCTTTGTACGATAAGGACAACGATGATTCTCGGAAGAACTCACAAG 3266
Query 3187 TCTTCTATGCAAATGATTCATTTTACGCGCTTTTCAGGCTGCA-CCGAATATTGTACGAG 3245
|||| |||| |||||||| ||||| | || |||||||| || | | || ||||| ||
Sbjct 3267 TCTTTTATGGGAATGATTCTTTTTATGTTCTATTCAGGCTTCATCAG-ATTTTGTATGAC 3325
Query 3246 AGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAGGGAAAGTGGAGGACCTCAAAT 3305
|||||| ||||||||||| | || |||||||| || || ||||||||| ||||||||||
Sbjct 3326 AGAATATTATCAGCAAAAATCAATTCATCATCTCCAGATAGAAAGTGGAAGACCTCAAAT 3385
Query 3306 ACCAA-AAATCCTACTGATTCCTATGCCAGATTCAT-GACTGCTCTCTACAACTTACTTG 3363
|||| ||| || ||||||| || |||||| |||| || |||||||||||| || || |
Sbjct 3386 -CCAACAAACCCCGCTGATTCGTACGCCAGAATCATGGA-TGCTCTCTACAATTTGCTCG 3443
Query 3364 ATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAGCGATAATCGGGACTCAGT 3423
|||| ||||| |||||| | ||||| |||||||| |||||||| || |||||||| ||||
Sbjct 3444 ATGGCACATCCGATAATTCAAAGTTCGAAGATGATTGCCGAGCAATTATCGGGACCCAGT 3503
Query 3424 CGTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCATCAAGCATCTCCAAGGAG 3483
| ||| ||||||||||||| |||||||||||| |||| |||||||||||||||||| ||
Sbjct 3504 CATATGTTCTCTTCACATTAGACAAACTGATCTATAAGCTCATCAAGCATCTCCAAGCAG 3563
Query 3484 TAGCAGCTGATGAGATGGACAACAAACTT-CTGCAGCTTTATGCATATGAGAAATCCAGA 3542
|||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||
Sbjct 3564 TAGCAGCTGATGAGATGGACAACAAA-TTACAACAGCTTTATGCTTATGAGAAATCCAGA 3622
Query 3543 AGGCCTGA-AACGATTT-TTGATGCTGTTTATTACGATAATGCCCGTGTCCTTC-TCCCT 3599
| |||||| || | ||| | ||||||||||||||||| ||||| | ||| |||| ||||
Sbjct 3623 AAGCCTGAGAA-G-TTTCTGGATGCTGTTTATTACGAAAATGCTCTTGTGCTTCTTCCC- 3679
Query 3600 GATGAGAATATTTACCGTATTGAATGTAAATTATCAAC-CCCAGCCAAACTCTCTATTCA 3658
|||||| |||| ||||| ||||||||| || ||| || || || |||||||||||||||
Sbjct 3680 GATGAGGATATATACCGCATTGAATGTGAACAATCGACACCAAG-CAAACTCTCTATTCA 3738
Query 3659 GCTTATGTG-CAACGGCCTTGAAAAGCCCGATGTGACATCTGTATCCATTGACCCGACCT 3717
|||| || | | | || | ||| ||||| ||||||||||| ||||||| ||||| || |
Sbjct 3739 GCTTCTG-GACTATGGACATGATAAGCCTGATGTGACATCCATATCCATGGACCCAACTT 3797
Query 3718 TTGCAGCTTACCTCCGCAATG-ACTTCCTCTCCGTA-CAATCGAATGC-AAGGGAGGATC 3774
||||||||||||||| ||||| | ||||| | | || ||| | ||||| || ||| |||
Sbjct 3798 TTGCAGCTTACCTCCACAATGTA-TTCCT-TTCTTATCAACCTAATGCGAA-AGAGAATC 3854
Query 3775 GTAGAATCTATTT-AAATAGGAACAAGCGCAAAGTTTGTGGTAAAGATGAACAGTTATAC 3833
| |||||||||| ||| |||| ||||| ||| | ||||| | ||||||| | | |
Sbjct 3855 CTCGAATCTATTTGAAA-CGGAATAAGCGTAAAAATGGTGGTGACGATGAAC---TCTGC 3910
Query 3834 AGCACAGATGGAGTTAAGATTAAAAATGGGTTGGAGTGTAAGATAGCCTGCGGTTCTTCA 3893
| ||| |||| ||||||||||| ||||| ||||| ||||||||| ||||| ||||||||
Sbjct 3911 ACCACGGATGAAGTTAAGATTATTAATGGTTTGGAATGTAAGATAACCTGCAGTTCTTCA 3970
Query 3894 AAGGTCTCCTATGTATTAGAAACAGAAGATTTGTTG 3929
|||||||||||||||||||| || || ||| |||||
Sbjct 3971 AAGGTCTCCTATGTATTAGACACCGAGGATGTGTTG 4006
Score = 514 bits (278), Expect = 3e-144
Identities = 471/561 (84%), Gaps = 26/561 (5%)
Strand=Plus/Plus
Query 36 ACCATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAATGACGCGCTTGCATACCTT 95
||||||||||||||| | ||||| |||||||||||||||||||| || |||||||| |||
Sbjct 152 ACCATGGTTGGAGGAAGTAGTGCACAGAAGCTAACTACAAATGATGCACTTGCATATCTT 211
Query 96 AAAGCCGTGAAGGATAAATTTCAGGATCAACGTGAAAAATACGACGAGTTTCTTGAGGTC 155
||||| || |||||||||||||| ||| ||||||| |||||||| ||||||||||||||
Sbjct 212 AAAGCTGTCAAGGATAAATTTCAAGATAAACGTGACAAATACGATGAGTTTCTTGAGGTT 271
Query 156 ATG-AAGAATTTT-AAGTCTCATCGAGTTGATAC-AGCTGGTGTGATAACAAGAGTAAAA 212
||| ||| ||||| ||| |||| |||||||||| | ||||||| || ||| || |||
Sbjct 272 ATGAAAG-ATTTTAAAG-CTCAGAGAGTTGATACTA-CTGGTGTTATCTTAAGGGTGAAA 328
Query 213 GAACTTTTCAAAGGGCACCA-AGAGTTAATATT-GGGTTTCAATACCTTCTTGCCAAAGG 270
|||||||| |||||| | || ||| || || || |||||| ||||| ||||| |||||||
Sbjct 329 GAACTTTTTAAAGGG-AACAGAGAATTGATTTTGGGGTTT-AATACTTTCTTACCAAAGG 386
Query 271 GTTTTGAGATCACACTCCAACCTGAAGATGGA-CAA--C-CTCCACTAAAGAAACGC-GT 325
|||| ||||| || |||| ||| || ||| || ||| | || ||| |||||| | | ||
Sbjct 387 GTTTCGAGATAACTCTCCGACCCGAGGAT-GACCAACCCGCTGCACCAAAGAAGC-CTGT 444
Query 326 TGAGTTTGAGGAAGCAATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAGGGCGACGA 385
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 445 TGAGTTTGAGGAAGCTATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAAGGCGATGA 504
Query 386 TCGTGTATACAAATCATTTTTAGACATTTTAAACATGTACAGAAAGGATAGCAAGTCCAT 445
||||||||||||||| |||||||||||||| |||||||| |||||||| | |||||| ||
Sbjct 505 TCGTGTATACAAATCGTTTTTAGACATTTTGAACATGTATAGAAAGGAAAACAAGTCTAT 564
Query 446 AACTGAAGTCTACCAGGAGGTTGCCGTCCTATTTCGGGATCAT-ACGGATTTGCTTGTAG 504
||||| |||||||| ||||| || |||| |||||||| ||| ||| ||||||||| ||
Sbjct 565 TACTGAGGTCTACCATGAGGTGGCTATCCTTTTTCGGGACCATCACG-ATTTGCTTGGAG 623
Query 505 AGTTTACTCACTTTCTGCCTGATACTTCAGCAACACCCTCTA-T--TCATTCTGTGAAAA 561
|||| ||||||||||| ||||||||||||||||| | |||| | | ||||||| ||||
Sbjct 624 AGTTCACTCACTTTCTCCCTGATACTTCAGCAACTGCATCTACTAATGATTCTGT-AAAA 682
Query 562 CTTC-AGCT-CGCGACAGAGG 580
||| || | || || |||||
Sbjct 683 GTTCCAG-TACGTGATAGAGG 702
> AT1G24200.1 | Symbols: | Paired amphipathic helix (PAH2) superfamily
protein | chr1:8571173-8572377 REVERSE LENGTH=591
Length=591
Score = 442 bits (239), Expect = 1e-122
Identities = 421/505 (83%), Gaps = 27/505 (5%)
Strand=Plus/Plus
Query 39 ATGGTTGGAGGAGGAAGTGCTCAGAAG-CTAACTACAAATGACGCGCTTGCATACCTTAA 97
|||||||||| |||| | || || ||| || |||||||||||||||||| ||||||||
Sbjct 1 ATGGTTGGAGAAGGAGGCGCACACAAGCCT-ACTACAAATGACGCGCTTAAATACCTTAG 59
Query 98 AGCCGTGAAGGATAAATTTC-AGGATCAACGTGAAAAATACGACGAGTTTCTTGAGGTCA 156
||||||||||| |||||||| ||| ||||||||||||||| |||||||||||| || |||
Sbjct 60 AGCCGTGAAGGCTAAATTTCAAGG-TCAACGTGAAAAATATGACGAGTTTCTTCAGATCA 118
Query 157 TGA-AGAATTTTAAGTCTCATCGAGTTGATACAGCTGGTGTGATAACAA-GAGTAAAAGA 214
||| || ||| ||| |||| || |||||| | ||||||| |||| || || | |||||
Sbjct 119 TGATAG-ATTATAAAACTCAGAGAATTGATATATCTGGTGTTATAATAAGGA-TGAAAGA 176
Query 215 ACTTTTCAAAGGGCACCAA-GAGTTAATATTGGGTTTCAATACCTTCTTGCCAAAGGGTT 273
||| || |||| || ||| || ||| | |||||||||||| ||||||| ||||| ||||
Sbjct 177 ACTCTTGAAAGAACAACAAGGA-TTACTTTTGGGTTTCAATGCCTTCTTACCAAATGGTT 235
Query 274 TTGA-GATCACACTCCAACCTGAAGATGGACAACCTCCACTA-AAGAAACGC-GTTGAGT 330
| | ||||||| | | | ||| ||||||| ||| | ||||||| | || ||||
Sbjct 236 AT-ATGATCACA---C-A--T---CATGAACAACCTTCAC-AGAAGAAAC-CTGTCGAGT 283
Query 331 TTGAGGAAGCAATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAGGGCGACGATCGTG 390
| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 284 TAGGGGAAGCAATTAGTTTTATTAACAAGATTAAGACAAGGTTTCAGGGCGATGATCGTG 343
Query 391 TATACAAATCATTTTTAGACATTTTAAACATGTACAGAAAGGATAGCAAGTCCATAACTG 450
||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| || |
Sbjct 344 TATACAAATCAGTTTTAGACATTTTAAACATGTACAGAAAGGATAGGAAGCCCATCACCG 403
Query 451 AAGTCTACCAGGAGGTTGCCGTCCTATTTCGGGATCATA-CGGATTTGCTTGTAGAGTTT 509
||||||| |||||||||| ||||||||| ||||||| | |||||||||| ||||||
Sbjct 404 CGGTCTACCGGGAGGTTGCCATCCTATTTCTAGATCATAACA-ATTTGCTTGTGGAGTTT 462
Query 510 ACTCACTTTCTGCCTGATACTTCAG 534
|||||||||||||||| |||| |||
Sbjct 463 ACTCACTTTCTGCCTGCTACTCCAG 487
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 213209507750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5