BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472710
Length=2555
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 ... 4085 0.0
AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B | chr1:262020... 2078 0.0
> AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin
3 | chr1:9295736-9298541 FORWARD LENGTH=2572
Length=2572
Score = 4085 bits (2212), Expect = 0.0
Identities = 2469/2586 (95%), Gaps = 45/2586 (2%)
Strand=Plus/Plus
Query 1 ACCTTCGAAATCTATCTTCTCCGATA--TCTCTATCTATATCTCTTCTTACACGCCGACG 58
|||||||||||||||||||||||||| |||||||||||| || |||| |||||
Sbjct 1 ACCTTCGAAATCTATCTTCTCCGATACCTCTCTATCTATA--TC-TCTT------CGACG 51
Query 59 CTGCAAA-TATCCTTAAGCTTCTTTCTCCTTTCAACTTTTCGATTATTATTCCATTTCCT 117
||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 52 CTGCAAATTAGCCTTAAGCTTCTTTCTCCTTTAAACTTTTCGATTATTATTCCATTTCCT 111
Query 118 AACCttttt-tttCCCCCAAATCTATT-ATCGGAAGCAAAGAATACAATTCCAAACCCTA 175
| |||||| |||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 112 -ATCTTTTTGTTTCCCCCAAATCTTTTCA-CGGAAGCAAAGAATACAATTCCAAACCCTA 169
Query 176 AT-CCGATCATCCGTCTTTCCTCTCCGGTTTCAAAATATGAGTAATCAGAAGAAGAGGAA 234
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 ATCCCGATCATCCGTCTTTCCTCTCCGGTTTCAAAATATGAGTAATCAGAAGAAGAGGAA 229
Query 235 TTTTCAGATAGAGGCGTTTAAGCATCGCGTCGTTGTAGATCCCAAATACGCTGATAAAAC 294
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 230 TTTTCAGATAGAGGCGTTTAAGCATCGAGTCGTTGTGGATCCCAAATACGCTGATAAAAC 289
Query 295 TTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTATAATCAAGATGCTAGCGGTCTCAG 354
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 290 TTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTACAATCAAGATGCTAGCGGTCTCAG 349
Query 355 TTTCGAAGAACTTTACAGAAATGCGTACAACATGGTCCTGCACAAGTTTGGTGAGAAGCT 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 TTTCGAAGAACTTTACAGAAATGCGTACAACATGGTCCTGCACAAGTTTGGTGAGAAGCT 409
Query 415 TTATACTGGGTTTATTGCTACTATGACTTCTCATCTCAAAGAAAAGTCCAAGCTTATCGA 474
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 410 ATATACTGGGTTTATTGCTACTATGACTTCTCATCTCAAAGAAAAATCCAAGCTTATCGA 469
Query 475 GGCAGCTCAAGGAGGGTCATTCCTTGAAGAGCTTAATAAGAAATGGAATGAGCACAACAA 534
||||||||| |||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct 470 GGCAGCTCAGGGAGGGTCGTTTCTAGAAGAGCTTAATAAGAAATGGAATGAGCACAACAA 529
Query 535 AGCGTTAGAGATGATTCGAGACATTCTCATGTATATGGATAGGACTTACATTGAGAGCAC 594
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 530 AGCGTTAGAGATGATTCGAGACATTCTCATGTATATGGATAGGACTTATATTGAGAGCAC 589
Query 595 CAAAAAGACTCATGTTCATCCGATGGGGCTTAACTTGTGGAGGGATAATGTTGTGCATTT 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 CAAAAAGACTCATGTTCATCCGATGGGGCTTAACTTGTGGAGGGATAATGTTGTGCATTT 649
Query 655 CACTAAGATACATACAAGGCTTCTAAACACTCTTCTTGATCTAGTGCAGAAGGAACGGAC 714
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 CACTAAGATACATACAAGGCTTCTAAACACTCTTCTTGATCTAGTGCAGAAGGAACGGA- 708
Query 715 T-GGTGAAGTTATTGACAGGGGGTTGATGAGGAATGTCATTAAGATGTTTATGGACTTGG 773
| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 709 TAGGTGAAGTTATTGATAGGGGGTTGATGAGGAATGTCATTAAGATGTTTATGGATTTGG 768
Query 774 GTGAATCTGTGTATCAGGAGGATTTTGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTT 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 GTGAATCTGTGTATCAGGAGGATTTTGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTT 828
Query 834 ATAAGGTTGAGTCTCAGGAGTTTATTGAATCTTGTGATTGTGGGGATTACCTAAAGAAAG 893
|||||||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct 829 ATAAGGTTGAGTCTCAGGAGTTTATTGAATCTTGTGATTGTGGGGACTATCTGAAGAAAT 888
Query 894 CAGAGAAACGCCTAACTGAAGAAATAGAGAGGGTAGCACACTACTTGGATGCCAAGAGCG 953
||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct 889 CAGAGAAACGCCTTACTGAAGAGATAGAGAGGGTAGCGCACTACTTAGATGCCAAGAGCG 948
Query 954 AAGAGAAGATTACTAGTGTGGTTGAGAAAGAGATGATTGCCAACCACATGCAGAGACTGG 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 AAGAGAAGATTACTAGTGTGGTTGAGAAAGAGATGATTGCCAACCACATGCAGAGACTGG 1008
Query 1014 TTCACATGGAGAACTCAGGTCTGGTTAATATGCTTCTGAATGACAAGTATGATGATTTGG 1073
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1009 TTCACATGGAGAACTCAGGTCTGGTTAATATGCTTCTGAATGACAAGTATGAGGATTTGG 1068
Query 1074 GTAGAATGTACAACTTGTTTCGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTA 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 GTAGAATGTACAACTTGTTTCGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTA 1128
Query 1134 TGACTTCTCATCTTAGGGAGATGGGAAAACAACTGGTTACTGATCCGGAAAAGTCAAAGG 1193
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 TGACTTCGCATCTTAGGGAGATGGGAAAACAACTGGTTACTGATCCGGAAAAGTCAAAGG 1188
Query 1194 ATCCAGTGGAATTTGTACAGCGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCA 1253
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 ATCCGGTGGAATTTGTACAACGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCA 1248
Query 1254 GCACCGCATTTGGCAATGATAAAACCTTTCAGAATGCGCTGAATTCTTCATTTGAGTATT 1313
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1249 ACACCGCATTTGGCAATGATAAAACCTTTCAGAATGCCCTGAATTCTTCATTCGAGTATT 1308
Query 1314 TCATCAACTTGAATGCTCGTTCTCCTGAGTTCATCTCACTGTTTGTTGATGACAAGCTAC 1373
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1309 TCATCAACTTGAATGCTCGTTCTCCTGAGTTTATCTCCCTGTTTGTTGATGACAAGCTAC 1368
Query 1374 GGAAAGGACTTAAGGGTATCGCCGATGTGGATGTGGAGGTTATCCTTGATAAAGTTATGA 1433
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||
Sbjct 1369 GGAAAGGACTTAAGGGTATCACCGATGTGGATGTTGAGGTTATCCTTGATAAAGTGATGA 1428
Query 1434 TGCTGTTCCGTTATTTACAAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGG 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 TGCTGTTCCGTTATTTACAAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGG 1488
Query 1494 CTAAAAGGCTTCTCTCAGGCAAAACTGTGTCAGATGAAGCAGAGAGGAGTTTAATAGTGA 1553
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1489 CTAAAAGGCTTCTCTCAGGCAAAACTGTGTCAGATGACGCAGAAAGGAGTTTAATAGTGA 1548
Query 1554 AACTAAAGACAGAATGTGGCTATCAGTTCACTTCAAAATTGGAAGGCATGTTCACTGACA 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 AACTAAAGACAGAATGTGGCTATCAGTTCACTTCAAAATTGGAAGGCATGTTCACTGACA 1608
Query 1614 TGAAAACTTCAGAGGACACAATGCGCGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAG 1673
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1609 TGAAGACTTCAGAGGACACAATGCGTGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAG 1668
Query 1674 GACCAACACTTATTGTTCAGGTACTTACAACTGGTTCTTGGCCAACACAGCCTGCAGTAC 1733
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 GACCTACACTTATTGTTCAGGTACTTACAACTGGTTCTTGGCCAACACAGCCTGCAGTAC 1728
Query 1734 CTTGTAATCTCCCAGCTGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCCTACTACCTTG 1793
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1729 CTTGTAATCTCCCAGCTGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCTTACTACCTTG 1788
Query 1794 GGACCCACACGGGTAGAAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAG 1853
|||| || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789 GGACACATACCGGTAGAAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAG 1848
Query 1854 CCATCTTTGGAAAGGGTCAGAAACATGAACTGAATGTGTCGACTTTCCAGATGTGTGTTC 1913
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1849 CCATCTTTGGAAAGGGTCAGAAACATGAACTGAACGTGTCGACTTTCCAGATGTGTGTTC 1908
Query 1914 TCATGTTGTTCAACAACTCTGATCGACTCAGCTACAAAGAAATCGAACAGGCTACTGAAA 1973
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1909 TCATGTTGTTCAACAATTCTGATCGACTCAGCTACAAAGAGATCGAACAGGCTACAGAAA 1968
Query 1974 TCCCGGCAGCAGATCTTAAACGCTGTTTGCAGTCGCTAGCGTGTGTAAAGGGCAAAAACG 2033
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1969 TCCCGGCAGCAGATCTTAAACGCTGTTTGCAGTCGCTAGCTTGTGTAAAGGGCAAAAACG 2028
Query 2034 TGATAAAGAAAGAACCCATGAGCAAAGACATAGGAGAGGAGGATTCGTTTGTTGTGAACG 2093
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 2029 TGATAAAGAAAGAACCCATGAGCAAAGACATAGGAGAGGAGGATTTGTTCGTTGTGAACG 2088
Query 2094 ACAAATTCACCAGCAAGTTTTACAAAGTGAAGATCGGAACCGTGGTAGCCCAAAaagaga 2153
|||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||| || |
Sbjct 2089 ACAAGTTCACTAGCAAGTTTTACAAAGTGAAGATCGGAACTGTGGTTGCCCAAAAGGAAA 2148
Query 2154 cagaaccggagaagcaagagacgagacagagagtggaggaagacagaaAACCTCAGATTG 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2149 CAGAACCGGAGAAGCAAGAGACGAGACAGAGAGTGGAGGAAGACAGAAAACCTCAGATTG 2208
Query 2214 AAGCAGCCATTGTTAGGATCATGAAGTCCAGAAAAATACTAGACCACAACAACATAATCG 2273
|||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2209 AAGCAGCCATCGTAAGGATCATGAAGTCCAGGAAAATACTAGACCACAACAACATAATCG 2268
Query 2274 CAGAGGTGACGAAACAGTTGCAGCCACGGTTCCTGGCTAATCCCACAGAGATAAAGAAGA 2333
| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 2269 CCGAGGTGACGAAACAGTTGCAGCCACGGTTCCTAGCTAATCCCACGGAGATAAAGAAGA 2328
Query 2334 GAATCGAGTCGCTCATTGAACGAGATTTCTTGGAAAGAGATAGTACAGACCGGAAACTTT 2393
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2329 GAATCGAGTCGCTCATTGAACGAGATTTCTTGGAAAGGGATAGTACAGACCGGAAACTTT 2388
Query 2394 ACCGCTATCTAGCCTAAATAAGTTGAATACCACAACC-aaaaaaaaa-GACTTCACTCTC 2451
||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |||||
Sbjct 2389 ACCGCTATCTAGCCTAAATAAGTTGAATACCACAACCCAAAAAAAAAAGGCTTTACTCTG 2448
Query 2452 ttt-ttt-ttt-CTTTG---C-TT-TGTTT----------CT---GAACTGTACGGTAGT 2490
||| ||| ||| |||| | || ||||| || |||||||||||||||
Sbjct 2449 TTTCTTTCTTTGCTTTATTTCCTTATGTTTGATGTAAAATCTTTTGAACTGTACGGTAGT 2508
Query 2491 CGGTAAGAACGAACCAACACTGCATCACTACCG-TTTAATCGAATATTTACTTTTGTTTC 2549
|||||||||||||||||||| || ||||||||| ||||||||||||| || ||||||||
Sbjct 2509 CGGTAAGAACGAACCAACACAGCGTCACTACCGGTTTAATCGAATAT--ACATTTGTTTC 2566
Query 2550 CTTTTC 2555
||||||
Sbjct 2567 CTTTTC 2572
> AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B | chr1:26202031-26204442
REVERSE LENGTH=2337
Length=2337
Score = 2078 bits (1125), Expect = 0.0
Identities = 1871/2231 (84%), Gaps = 52/2231 (2%)
Strand=Plus/Plus
Query 212 ATGAGTAATCAGAAGAAGAGGAATTTTCAGATAGAGGCGTTTAAGCATCGCGTCGTTGTA 271
|||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||| ||
Sbjct 1 ATGAGTAATCAGAAGAAGAGAAATTTCCAGATTGAAGCGTTTAAGCAACGAGTCGTCGTT 60
Query 272 GATCCCAAATACGCTGATAAAACTTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTAT 331
||||| |||||||| |||||||||||| |||| ||||| | |||||| ||| |||||||
Sbjct 61 GATCCAAAATACGCCGATAAAACTTGGAAGATCCTTGAACATGCGATTCATGAGATTTAC 120
Query 332 AATCA-AGATGCTAGCGGTCTCAGTTTCGAAGAACTTTACAGAAATGCGTACAACATGGT 390
||||| | | ||||| ||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 121 AATCACA-ACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAACGCATACAACATGGT 179
Query 391 CCTGCACAAGTTTGGTGAGAAGCTTTATACTGGGTTTATTGCTACTATGAC-TTCTCATC 449
|| || |||| |||||| |||||||||||||| || || | |||||||| || |||||
Sbjct 180 TCTACATAAGTATGGTGATAAGCTTTATACTGGACTTGTTACCACTATGACATT-TCATC 238
Query 450 TCAAAGA-A-AAGTCCAAGCT-TATCGAGGCAGCTCAAGGAGG-GTCATTCCTT-GAAGA 504
||||||| | | || ||| | ||| || | |||||||||||| | |||| || |||
Sbjct 239 TCAAAGAGATATGT--AAG-TCTATTGAAGAAGCTCAAGGAGGAG-CATT-TTTAGAATT 293
Query 505 GCTTAATAAGAAATGGAATGAGCACAACAAAGCGTTAG-AGATGATTCGAGACATTCTCA 563
|||||||| |||||||||||| || ||||||||||| | | |||||| | || |||||||
Sbjct 294 GCTTAATAGGAAATGGAATGATCATAACAAAGCGTT-GCAAATGATTAGGGATATTCTCA 352
Query 564 TGTATATGGATAGGACTTACATTGAGAGC-ACCAA-AAAGACTCATGTTCATCCGATGGG 621
||||||||||| | |||||| || | | || || ||| |||||||||||| | | ||
Sbjct 353 TGTATATGGATCGTACTTACGTTTCTA-CTACTAAGAAA-ACTCATGTTCATGAGCTTGG 410
Query 622 GCTT-AACTTGTGGAGGGATAATGTTGTGCATTTC-ACTAAGATACATACAAGGCT-TCT 678
||| | | | ||||| |||||||||||| | ||| | |||||| || || ||||| | |
Sbjct 411 ACTTCATC-TCTGGAGAGATAATGTTGTGTA-TTCGAGTAAGATTCAGACTAGGCTAT-T 467
Query 679 AAACACTCTTCTTGATCTAGTGCAGAAGGAACGGACTGGTGAAGTTATTGACAGGGGGTT 738
|| || ||||||||| |||| || ||||||||||||||||||||||| || |||| |||
Sbjct 468 GAATACGCTTCTTGATTTAGTTCATAAGGAACGGACTGGTGAAGTTATAGATAGGGTGTT 527
Query 739 GATGAGGAATGTCATTAAGATGTTTATGGACTTGGGTGAATCTGTGTATCAGGAGGATTT 798
|||||||||||| ||||||||||||||||| || ||||||||||| ||||| || |||||
Sbjct 528 GATGAGGAATGTGATTAAGATGTTTATGGATTTAGGTGAATCTGTTTATCAAGATGATTT 587
Query 799 TGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTTATAAGGTTGAGTCTCA-GGAGTTTA 857
|||||||||||||||||| || ||| |||||||||||||||||||||| | ||||||||
Sbjct 588 TGAGAAGCCGTTTTTGGAAGCTTCTGCTGAGTTTTATAAGGTTGAGTC-AATGGAGTTTA 646
Query 858 TTGAATCTTGTGATTGTGGGGATTACCTAAAGAAAGCAGAGAAACGCC-TAACT-GAAGA 915
|||| |||||||||||||| || || | |||||||| ||| || ||| | | | |||||
Sbjct 647 TTGAGTCTTGTGATTGTGGTGAGTATTTGAAGAAAGCTGAG-AA-GCCTTTAGTGGAAGA 704
Query 916 AATAGAGAGGGTAG-CACACTACTTGGATGCCAAGAGCGAAGAGAAGATTACTAGTGTGG 974
| | || ||||| | | | || |||||||| |||||||||| |||||||||||||||||
Sbjct 705 AGTCGAAAGGGTTGTGA-ATTATTTGGATGCTAAGAGCGAAGCGAAGATTACTAGTGTGG 763
Query 975 TTGAGAA-AGAGATGATTGCCAACCACATGCAGAGACTGGTTCACATGGAGAACTCAGGT 1033
|||| || |||||||||||| ||||| |||||||||| ||||| |||||||| ||||||
Sbjct 764 TTGA-AAGAGAGATGATTGCTAACCATGTGCAGAGACTAGTTCATATGGAGAATTCAGGT 822
Query 1034 CTGGTTAATATGCTTCTGAATGACAAGTATGATGATTTGGGTAGAATGTACAACTTGTTT 1093
|||||||||||||| ||||||| |||||||| ||| ||||||||||||| | |||||
Sbjct 823 TTGGTTAATATGCTTTTGAATGATAAGTATGAGGATATGGGTAGAATGTATAGTTTGTTC 882
Query 1094 CGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTATGACTTCT-CATCTTAGGGA 1152
|| |||||| ||||||||||||| || || ||||| |||||||||| | |||||||||||
Sbjct 883 CGTAGGGTTGCTAATGGTCTTGTAACGGTTAGAGATGTTATGACTT-TGCATCTTAGGGA 941
Query 1153 GATGGGAAAACAACTGGTTACTGATCCGGA-AAAGTCAAAGGATCCAGTGGAATTTGTAC 1211
||||||||||| ||||||||||||| || ||| ||||||||||| || |||||||| |
Sbjct 942 AATGGGAAAACAGTTGGTTACTGATCCAGAGAAA-TCAAAGGATCCGGTTGAATTTGTGC 1000
Query 1212 AGCGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCAGCACCGCATTTGGCAATG 1271
||||||||||||||||||||||||| ||||||| ||| |||| || |||||| ||| |
Sbjct 1001 AGCGTCTATTGGATGAGCGGGATAAGTATGACAGAATTATCAACATGGCATTTAACAACG 1060
Query 1272 ATAAAACCTTTCAGAATGCGCTGAATTCTTCATTTGAGTATTTCATCAACTTGAATGCTC 1331
|||| || || ||||||||||| |||||||| |||||||||||| |||||||||| | |
Sbjct 1061 ATAAGACGTTCCAGAATGCGCTAAATTCTTCGTTTGAGTATTTCGTCAACTTGAACACAC 1120
Query 1332 GTTCTCCTGAGTTCATCTCACTGTTTGTTGATGACAAGCTACGGAAAGGACTTAAGGGTA 1391
||||||||||||| ||||| |||||||||||||| |||||||| |||||||| || |||
Sbjct 1121 GTTCTCCTGAGTTTATCTCCCTGTTTGTTGATGATAAGCTACGAAAAGGACTAAAAGGTG 1180
Query 1392 TCGCCGATGTGGATGTGGAGGTTATCCTTGATAAAGTTATGATGCTGTTCCGTTATTTAC 1451
| | || | |||||| || |||| |||||||| || |||||| |||| || || ||||
Sbjct 1181 TGGGAGAGGAGGATGTCGATCTTATTCTTGATAAGGTGATGATGTTGTTTCGCTACTTAC 1240
Query 1452 AAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGGCTAAAAGGCTTCTCTCAG 1511
| |||||||| || |||||||| || ||||| |||||| |||| ||||||||| | || |
Sbjct 1241 AGGAGAAAGACGTTTTTGAGAAATATTACAAACAGCATCTGGCGAAAAGGCTTTTATCTG 1300
Query 1512 GCAAAACTGTGTCAGATGAAGCAGAGAGGAGTTTAATAGTGAAACTAAAGACAGAATGTG 1571
| ||||||||||| ||||| |||||||||| | | ||||||||||| ||||| |||||||
Sbjct 1301 GAAAAACTGTGTCGGATGATGCAGAGAGGAATCTGATAGTGAAACTGAAGACGGAATGTG 1360
Query 1572 GCTATCAGTTCACTTC-AAAATTGGAAGGCATGTTCACTGACATGAAAACTTCAGAGGAC 1630
| ||||| |||||||| ||| || ||||| ||||||||||||||||| || ||| | |||
Sbjct 1361 GGTATCAATTCACTTCGAAACTT-GAAGGTATGTTCACTGACATGAAGACCTCACACGAC 1419
Query 1631 ACAATGCGCGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAGGACCAACACTTATTGTT 1690
|| ||| || |||||| || || |||||||||||||||||||| |||||| |||||
Sbjct 1420 ACGCTGCTAGGATTTTATAATAGCCATCCCGAGCTTTCAGAAGGACCTACACTTGTTGTT 1479
Query 1691 CAGGTACTTACAACTGGTTCTTGGCCAACACAGCC-TGCAGTACCTTGTAATCTCCCAGC 1749
||||| || ||||| ||||||||||| |||||||| || ||| ||||| || || ||
Sbjct 1480 CAGGTTCTCACAACCGGTTCTTGGCCCACACAGCCAACCA-TACAATGTAACCTACCTGC 1538
Query 1750 TGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCCTACTACCTTGGGACCCACACGGGTAG 1809
|||||||| ||||| |||||||||||| | || || ||||| ||||| ||||| |||||
Sbjct 1539 AGAAGTTTCTGTTCTGTGTGAGAAGTTCAGGTCATATTACCTCGGGACTCACACCGGTAG 1598
Query 1810 AAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAGCCA-TCTTTGGAAAGG 1868
|||||||| |||||||| || ||||| |||||||||||||||| || | ||||||||||
Sbjct 1599 GAGATTGTCTTGGCAAACGAATATGGGAACAGCAGATATCAAAG-CAGTGTTTGGAAAGG 1657
Query 1869 GTCAGAAACATGAACTGAATGTGTCGACTTTCCAGATGTGTGTTCTCATGTTGTTCAACA 1928
||||||| |||||||| || || ||||||||||| |||||||| || |||||||||||||
Sbjct 1658 GTCAGAAGCATGAACTAAACGTTTCGACTTTCCAAATGTGTGTCCTTATGTTGTTCAACA 1717
Query 1929 ACTCTGATCGACTCAGCTACAAAGAAATCGAACAGGCTACTGAAATCCCGGCAGCAGATC 1988
||||||||||||| ||||||||||| ||||||||||| ||||||||||| | |||| |
Sbjct 1718 ACTCTGATCGACTAAGCTACAAAGAGATCGAACAGGCAACTGAAATCCCCACCCCAGA-C 1776
Query 1989 TTAAA-CGCTGTTTGCAGTCGCTAGCGTGTGTAAAGGGCAAAAACGTGATAAAG-AAAGA 2046
|||| || || |||||||| | ||||||||||| || ||||||||| | ||| |||||
Sbjct 1777 CTAAAGCGTTGCTTGCAGTCAATGGCGTGTGTAAAAGGTAAAAACGTGCT-AAGAAAAGA 1835
Query 2047 ACCCATGAGCAAAGACATAGGAGAGGAGGATTCGTTTGTTGTGAACGACAAATTCACCAG 2106
||| |||||||| || |||| ||||||||| | ||||||||||||||||| ||| | ||
Sbjct 1836 ACCAATGAGCAAGGAGATAGCAGAGGAGGACTGGTTTGTTGTGAACGACAGGTTCGCAAG 1895
Query 2107 CAAGTTTTACAAAGTGAAGATCGGAACCGTGGTAGCCCAAAaagagacagaaccggagaa 2166
|||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||| |||||
Sbjct 1896 CAAGTTCTACAAAGTGAAGATAGGAACTGTGGTGGCACAAAAGGAGACAGAACCAGAGAA 1955
Query 2167 gcaagagacgagacagagagtggaggaagacagaaAACCTCAGATTGAAGCAGCCATTGT 2226
||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||
Sbjct 1956 GCAAGAGACAAGACAGAGAGTAGAAGAAGACAGAAAACCTCAGATCGAAGCAGCCATCGT 2015
Query 2227 TAGGATCATGAAGTCCAGAAAAATACTAGACCACAACAACATAATCGCAGAGGTGACGAA 2286
||||| |||||||| ||| | | | || ||||||||||||||||||||||| || ||
Sbjct 2016 GAGGATAATGAAGTCTAGACGAGTGTTGGATCACAACAACATAATCGCAGAGGTCACCAA 2075
Query 2287 ACAGTTGCAGCCACGGTTCCTGGCTAATCCC-ACAGAGATAAAGAAGAGAATCGAGTCGC 2345
|||||||||| | |||||| |||| || ||| |||||||||||||||||||| || || |
Sbjct 2076 ACAGTTGCAGACGCGGTTCTTGGC-AAACCCAACAGAGATAAAGAAGAGAATTGAATCAC 2134
Query 2346 TCATTGAACGAGATTTCTTGGAAAGAGATAGTACAGACCGGAAACTTTACCGCTATCTAG 2405
||||||| || ||||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct 2135 TCATTGAGCGTGATTTCTTGGAGAGGGATAATACAGACCGGAAACTTTACCGCTATCTAG 2194
Query 2406 CCTAAATAAGT 2416
| |||| ||||
Sbjct 2195 CGTAAAAAAGT 2205
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126822031904
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5