BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg472731

Length=807
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G26750.1 | Symbols:  | unknown protein; Has 44 Blast hits to...   998    0.0  
  AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | c...   161    8e-39


> AT1G26750.1 | Symbols:  | unknown protein; Has 44 Blast hits 
to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa 
- 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes 
- 0 (source: NCBI BLink). | chr1:9246787-9248274 FORWARD 
LENGTH=879
Length=879

 Score =  998 bits (540),  Expect = 0.0
 Identities = 588/612 (96%), Gaps = 0/612 (0%)
 Strand=Plus/Plus

Query  1    AAGCGAAAAAGCTCAGCAACAATGTCGTGGATGAAAGGTGATTTACTTTCCAAAACCAGG  60
            ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  50   AAGTGAAGAAGCTCAGCAACAATGTCGTGGATGAAAGGTGATTTACTTTCCAAAACCAGG  109

Query  61   AGGCTTGTTGGTGGCTTAGCTACACGAGAGCCTGTTTGGCTTAAGGCCATGGAAGCTTCA  120
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct  110  AGGCTTGTTGGTGGCTTAGCTACACGAGAGCCTGTTTGGCTTAAAGCCATGGAAGCATCA  169

Query  121  CCTCCTCCTGTGTTTCCTCGCTCTAATGGAAAAATCCAGAGGATTGTTCTCCCCGAGGAT  180
            || |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct  170  CCACCTCCTGTGTTTCCTCGCTCCAATGGAAAAATCCAGAAGATTGTTCTCCCTGAGGAT  229

Query  181  CCTTATGTTCGTAAATTCGCCAATAAGCATCCTGGAACAAAAATTGATGACCCTGCCAAG  240
            ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct  230  CCTTACGTTCGTAAATTCGCTAATAAGCATCCTGGAACCAAAATTGATGACCCTGCCAAG  289

Query  241  ATATCAGCGTTTGTTCCAGATCAAGCACGTGTGTATGGTTGTCGGGTACTTGAATTGAAG  300
            |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  290  ATATCAGCATTTATTCCAGATCAAGCACGTGTGTATGGTTGCCGGGTACTTGAATTGAAG  349

Query  301  GAGCATGGCATCAGTGAGGATGATGCCATGTCTGTAGCTAATATGGAATATCTTTCAGAG  360
            ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct  350  GAGCATGGCATCAGTGAGGGTGACGCCATGTCTGTAGCTAATATGGAATATCTTTCAGAG  409

Query  361  AGAAAGGAAATGAAGAAAGCATACAAACGCTTAAAGGAGCTTGCGAAAATGCAAGATAAG  420
            |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct  410  AGAAAGGAAATGAAGAAAGCATACAAACGCTTAAAGGAGCTTGCGGTAATGCAAGATAAG  469

Query  421  GATCCACCTCCTAAACCGTATCCTAGTGCCAAAAAAGGGTTAATAACTCAATCGAAGAAA  480
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct  470  GATCCACCTCCTAAACCGTATCCTAGTGCCAAGAAAGGGTTAATAACTCAATCGAAGACA  529

Query  481  TCTGCTAAGGATCGATTCCAGACTCCTAGCGTCCGCAGGCTAGTTAACCAGTTGAAAACT  540
            || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  530  TCCGCTAAGGATCGCTTCCAGACTCCTAGCGTCCGCAGGCTAGTTAACCAGTTGAAAAAT  589

Query  541  GAGAAAGATGTGTTGCTGCAGGACAGAACCGGAGGAAGTGCTAATCAGGATAATTGGATC  600
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  590  GAGAAAGATGTGTTGCTGCAAGACAGAACCGGAGGAAGTGCTAATCAGGATAATTGGATC  649

Query  601  GACGAATAAATT  612
            ||||||||||||
Sbjct  650  GACGAATAAATT  661


 Score =  259 bits (140),  Expect = 3e-68
 Identities = 179/196 (91%), Gaps = 10/196 (5%)
 Strand=Plus/Plus

Query  613  CTACTCATCCAATTTCTTTTGTAGAACTGGC-TTTTTCATATATGACTTTCTTTGACTAC  671
            |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct  693  CTACTCATCCAATTTC-TTTGTAGAACTGGCTTTTTTCATATATGACATTCTTTGACTAC  751

Query  672  AAATGATTTGCAACAAAACAAGTGTTATTTCCATTTGAGTGTCTTTGTAATAATAATATA  731
            ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |   
Sbjct  752  AAATGTTTTGCAACAAAACAAGTGTTATTTCCATTTGAATGTCTTTGTAATAATA-T---  807

Query  732  ATATCATTGGATGTTTTCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTATTA  791
                |||||||||||| |||||||||||||||||||||||||||||||||||||||| | 
Sbjct  808  ----CATTGGATGTTTCCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTACTC  863

Query  792  TCTCTATGGATCCTAC  807
            ||||||| ||||||||
Sbjct  864  TCTCTATTGATCCTAC  879


> AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | 
chr1:9248152-9249943 REVERSE LENGTH=1792
Length=1792

 Score =  161 bits (87),  Expect = 8e-39
 Identities = 117/130 (90%), Gaps = 8/130 (6%)
 Strand=Plus/Minus

Query  678   TTTGCAACAAAACAAGTGTTATTTCCATTTGAGTGTCTTTGTAATAATAATATAATATCA  737
             |||||||||||||||||||||||||||||||| ||||||||      | | |||||||||
Sbjct  1791  TTTGCAACAAAACAAGTGTTATTTCCATTTGAATGTCTTTG------T-A-ATAATATCA  1740

Query  738   TTGGATGTTTTCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTATTATCTCTA  797
             |||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct  1739  TTGGATGTTTCCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTACTCTCTCTA  1680

Query  798   TGGATCCTAC  807
             | ||||||||
Sbjct  1679  TTGATCCTAC  1670



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 39283102954


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5