BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472731 Length=807 Score E Sequences producing significant alignments: (Bits) Value AT1G26750.1 | Symbols: | unknown protein; Has 44 Blast hits to... 998 0.0 AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | c... 161 8e-39 > AT1G26750.1 | Symbols: | unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9246787-9248274 FORWARD LENGTH=879 Length=879 Score = 998 bits (540), Expect = 0.0 Identities = 588/612 (96%), Gaps = 0/612 (0%) Strand=Plus/Plus Query 1 AAGCGAAAAAGCTCAGCAACAATGTCGTGGATGAAAGGTGATTTACTTTCCAAAACCAGG 60 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 AAGTGAAGAAGCTCAGCAACAATGTCGTGGATGAAAGGTGATTTACTTTCCAAAACCAGG 109 Query 61 AGGCTTGTTGGTGGCTTAGCTACACGAGAGCCTGTTTGGCTTAAGGCCATGGAAGCTTCA 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 110 AGGCTTGTTGGTGGCTTAGCTACACGAGAGCCTGTTTGGCTTAAAGCCATGGAAGCATCA 169 Query 121 CCTCCTCCTGTGTTTCCTCGCTCTAATGGAAAAATCCAGAGGATTGTTCTCCCCGAGGAT 180 || |||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| Sbjct 170 CCACCTCCTGTGTTTCCTCGCTCCAATGGAAAAATCCAGAAGATTGTTCTCCCTGAGGAT 229 Query 181 CCTTATGTTCGTAAATTCGCCAATAAGCATCCTGGAACAAAAATTGATGACCCTGCCAAG 240 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 230 CCTTACGTTCGTAAATTCGCTAATAAGCATCCTGGAACCAAAATTGATGACCCTGCCAAG 289 Query 241 ATATCAGCGTTTGTTCCAGATCAAGCACGTGTGTATGGTTGTCGGGTACTTGAATTGAAG 300 |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 290 ATATCAGCATTTATTCCAGATCAAGCACGTGTGTATGGTTGCCGGGTACTTGAATTGAAG 349 Query 301 GAGCATGGCATCAGTGAGGATGATGCCATGTCTGTAGCTAATATGGAATATCTTTCAGAG 360 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 350 GAGCATGGCATCAGTGAGGGTGACGCCATGTCTGTAGCTAATATGGAATATCTTTCAGAG 409 Query 361 AGAAAGGAAATGAAGAAAGCATACAAACGCTTAAAGGAGCTTGCGAAAATGCAAGATAAG 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 410 AGAAAGGAAATGAAGAAAGCATACAAACGCTTAAAGGAGCTTGCGGTAATGCAAGATAAG 469 Query 421 GATCCACCTCCTAAACCGTATCCTAGTGCCAAAAAAGGGTTAATAACTCAATCGAAGAAA 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 470 GATCCACCTCCTAAACCGTATCCTAGTGCCAAGAAAGGGTTAATAACTCAATCGAAGACA 529 Query 481 TCTGCTAAGGATCGATTCCAGACTCCTAGCGTCCGCAGGCTAGTTAACCAGTTGAAAACT 540 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 530 TCCGCTAAGGATCGCTTCCAGACTCCTAGCGTCCGCAGGCTAGTTAACCAGTTGAAAAAT 589 Query 541 GAGAAAGATGTGTTGCTGCAGGACAGAACCGGAGGAAGTGCTAATCAGGATAATTGGATC 600 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 590 GAGAAAGATGTGTTGCTGCAAGACAGAACCGGAGGAAGTGCTAATCAGGATAATTGGATC 649 Query 601 GACGAATAAATT 612 |||||||||||| Sbjct 650 GACGAATAAATT 661 Score = 259 bits (140), Expect = 3e-68 Identities = 179/196 (91%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 613 CTACTCATCCAATTTCTTTTGTAGAACTGGC-TTTTTCATATATGACTTTCTTTGACTAC 671 |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| Sbjct 693 CTACTCATCCAATTTC-TTTGTAGAACTGGCTTTTTTCATATATGACATTCTTTGACTAC 751 Query 672 AAATGATTTGCAACAAAACAAGTGTTATTTCCATTTGAGTGTCTTTGTAATAATAATATA 731 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 752 AAATGTTTTGCAACAAAACAAGTGTTATTTCCATTTGAATGTCTTTGTAATAATA-T--- 807 Query 732 ATATCATTGGATGTTTTCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTATTA 791 |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 808 ----CATTGGATGTTTCCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTACTC 863 Query 792 TCTCTATGGATCCTAC 807 ||||||| |||||||| Sbjct 864 TCTCTATTGATCCTAC 879 > AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | chr1:9248152-9249943 REVERSE LENGTH=1792 Length=1792 Score = 161 bits (87), Expect = 8e-39 Identities = 117/130 (90%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 678 TTTGCAACAAAACAAGTGTTATTTCCATTTGAGTGTCTTTGTAATAATAATATAATATCA 737 |||||||||||||||||||||||||||||||| |||||||| | | ||||||||| Sbjct 1791 TTTGCAACAAAACAAGTGTTATTTCCATTTGAATGTCTTTG------T-A-ATAATATCA 1740 Query 738 TTGGATGTTTTCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTATTATCTCTA 797 |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 1739 TTGGATGTTTCCTTCCATGAGGCAAGGAATTACAGAAAACCAAAATGGTTACTCTCTCTA 1680 Query 798 TGGATCCTAC 807 | |||||||| Sbjct 1679 TTGATCCTAC 1670 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 39283102954 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5