BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472736
Length=1736
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26700.1 | Symbols: MLO14, ATMLO14 | Seven transmembrane MLO... 2809 0.0
> AT1G26700.1 | Symbols: MLO14, ATMLO14 | Seven transmembrane MLO
family protein | chr1:9228235-9232240 FORWARD LENGTH=1733
Length=1733
Score = 2809 bits (1521), Expect = 0.0
Identities = 1668/1739 (96%), Gaps = 9/1739 (1%)
Strand=Plus/Plus
Query 1 TTGGTTTCTTGCACGCGAAGAAAGAAACATCTGAAAGA-TTGTTCGTAAAGAATTCGGTT 59
|||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||
Sbjct 1 TTGGTTTCTTGCACGCGAAGAAAGAAACATCTGAAA-ATTTGTTCATAAAGAATTCGGTT 59
Query 60 GCAGAAATGAGAGAAGAAACAGAACCAAGCGAAAGAACGTTGGGTTTAACACCAACTTGG 119
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 60 GAAGAAATGAGAGAAGAAACAGAACCAAGCGAGAGAACGTTGGGTTTAACACCAACTTGG 119
Query 120 TCCGTTGCTACAGTGTTGACTGTCTTTGTATTTGTTTCTTTGATCGTTGAACGTTCCATT 179
|| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 120 TCAGTTGCTACAGTATTGACTATCTTTGTATTTGTTTCTTTGATCGTTGAACGTTCCATT 179
Query 180 CATCGGCTTAGTAACTGGTTGCAAGAGACGAAGAGAAAACCTTTGTTTGCTGCATTGGAG 239
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 180 CATCGGCTTAGTAACTGGTTGCAAAAGACTAAGAGAAAACCTTTGTTTGCTGCATTGGAG 239
Query 240 AAAATGAAAGAAGAGCTGATGCTGCTCGGATTCATATCGCTTCTTCTTACAGCAACCTCT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 240 AAAATGAAAGAAGAGCTGATGCTGCTCGGATTCATATCGCTTCTTCTTACAGCTACCTCT 299
Query 300 AGCACAATAGCTAACATATGCGTCTCTTCAAGTTTCCACAATGATAGATTTGTTCCATGT 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 300 AGCACAATAGCTAACATATGCGTCTCTTCAAGTTTCCACAACGATAGATTTGTCCCATGT 359
Query 360 AC-CCGCTCCGAGATTAATGATCAGGAACTTGAAAGTACTATTTCAT-CTGTCAAGCGGA 417
|| || || |||||||||| |||||||||||||||||||||| | ||||||||||||
Sbjct 360 ACGCC-TTCTGAGATTAATG---AGGAACTTGAAAGTACTATTTC-TACTGTCAAGCGGA 414
Query 418 CTCGGTTAACTAGATCTCTCTTCTTCCACATTATGAGAAGAAGATTGAGTGGCATAGGCG 477
||| |||||| |||||||||||||| |||| | |||| |||||||||||||| ||||| |
Sbjct 415 CTCAGTTAACGAGATCTCTCTTCTTGCACACTCTGAGGAGAAGATTGAGTGGTATAGGAG 474
Query 478 AGAATACGTGCAGCGAGGGACATGAGCCATTTCTTTCATATGAAGGCATGGAACAATTGC 537
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 475 AGGATACGTGCAGCGAGGGGCATGAGCCATTTCTTTCATATGAAGGCATGGAACAATTGC 534
Query 538 ATCGCTTCATATTTATAATGGCAGTCACACATGTAACTTACAGCTGCTTGACAATGCTTC 597
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 535 ATCGCTTCATATTTATAATGGCAGTCACTCATGTAACTTACAGCTGCTTGACAATGCTTC 594
Query 598 TTGCAATAGTGAAGATTCATAGATGGCGGATCTGGGAAGACGAGGCTCATATGGATCGAA 657
||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct 595 TTGCAATCGTGAAGATTCATAGATGGAGGATATGGGAAGACGAGGTTCATATGGATCGAA 654
Query 658 ATGATTGCTTAACTGTGGTTGCACGTGAAAAGATTTTCCGAAGGCAAACAACATTTGTCC 717
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 655 ATGATTGCTTAACTGTGGTTGCACGCGAAAAGATTTTCCGAAGGCAAACAACATTTGTCC 714
Query 718 AGTATCATACATCTGTTCCTCTGGTTAAGAATAGATTACTCATATGGGTGATATGTTTCT 777
||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 715 AGTATCATACATCTGCTCCTCTGGTCAAGAATAGATTACTTATATGGGTGATATGTTTCT 774
Query 778 TCAGACAGTTTGGACACTCTGTTGTTCGTTCTGACTATCTTACACTCCGCAAGGGATTCA 837
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 775 TCAGACAGTTTGGACATTCTGTTGTTCGTTCTGACTATCTTACACTCCGAAAGGGATTCA 834
Query 838 TCATGAACCATCACCTAACATTGACATACGATTTTCATAGCTATATGATCCGCTCTATGG 897
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 TCATGAACCATCACTTAACATTGACATACGATTTTCATAGCTATATGATCCGCTCTATGG 894
Query 898 AAGAAGAATTCCAAAAGATTGTTGGCGTCAGTGGGCCACTTTGGGGTTTTGTAGTTGGTT 957
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 AAGAAGAGTTCCAAAAGATTGTTGGCGTCAGTGGGCCACTTTGGGGTTTTGTAGTTGGTT 954
Query 958 TCATGCTTTTCAACATAAAAGGGTCAAATCTTTATTTCTGGTTAGCGATCATTCCAATCA 1017
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 955 TCATGCTTTTCAACATAAAAGGATCAAATCTTTATTTCTGGCTAGCGATCATTCCAATCA 1014
Query 1018 CTCTTGTTCTTTTGGTTGGCGCAAAGTTGCAACATGTCATCGCAACTTTAGCATTGGAGA 1077
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 CTCTTGTTCTTTTGGTTGGTGCAAAGTTGCAACATGTCATCGCAACTTTAGCATTGGAGA 1074
Query 1078 ACGCTGGGATTACAGAATATGCTTCTGGTATAAAGTTGAGACCTCGCGATGAACTTTTTT 1137
||||| | || |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1075 ACGCTAGTATAACAGAATATGCTTCTGGTATAAAGCTGAGACCTCGCGATGAACTTTTTT 1134
Query 1138 GGTTCAAGAAACCAGAATTACTATTATCTCTTATCCACTTCATTCAGTTTCAGAATGCTT 1197
||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1135 GGTTCAAGAAACCGGAATTACTCTTATCCCTTATCCACTTCATTCAGTTTCAGAATGCTT 1194
Query 1198 TTGAACTGGCTTCCTTCTTCTGGTTTTGGTGGCAATTTGGATACAATTCTTGCTTCCTAA 1257
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TTGAACTGGCTTCTTTCTTCTGGTTTTGGTGGCAATTTGGATACAATTCTTGCTTCCTAA 1254
Query 1258 GGAATCATTTACTTGTCTACTTGCGACTTATTCTAGGGTTTTCTGGACAATTTTTATGTA 1317
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GGAACCATTTACTTGTCTACTTGCGACTTATTCTAGGGTTTTCTGGACAATTTTTATGTA 1314
Query 1318 GCTACAGCACACTGCCACTCTATGCACTTGTCACTCAGATGGGAACAAACTACAAGGCAG 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GCTACAGCACACTGCCACTCTATGCACTTGTCACTCAGATGGGAACAAACTACAAGGCAG 1374
Query 1378 CATTGTTACCTCAAAGGGTTAGAGAGACAATTAATGGTTGGGGAAAAGCAACTAGAAGGA 1437
||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||
Sbjct 1375 CATTGTTACCTCAAAGGGTAAGAGAGACAATTAATGGTTGGGGAAAAGCAACAAGACGGA 1434
Query 1438 AAAGAAGACATGGGTTATATGGTGATGATTCAACTATTCGAACAGAAACAAGCACAATTG 1497
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1435 AAAGAAGACATGGTTTATATGGAGATGATTCAACTATTCGAACAGAAACAAGCACAATTG 1494
Query 1498 CATCTGTTGATGAATACAATGACCAGGTGCTTGATGTTTCCGAAACATCTCCAGTTCAAG 1557
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1495 CATCTGTTGATGAATACAATGACCAGGTGCTTGATGTTTCCGAAACCTCTCCAGTTCAAG 1554
Query 1558 GTAACGAGCTTGAGCTTCAGCTTATTCGCGGATCTTGTGAAAATTCTAGCAGTGTTGAAA 1617
||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||
Sbjct 1555 ATAACGAGCTTGAGCTTCAGCTTATTCGCGGAGCTTGTGGAAATTCTAGTAGTGTTGAAA 1614
Query 1618 CACCGATCTTGCGACCTTGTGCTTCAATATCTTCAACAACTTTCTCAAGGCTACAGACAG 1677
||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1615 CACCGATCTTGCGGCCTTGTGCTTCAATATCTTCAACGACTTTCTCGAGGCTACAGACAG 1674
Query 1678 AAACAACAGAATCACTCTCAAGGTCATCCTCATTGCCAATGAGAAGAGAATGTTAAGAT 1736
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 AAACAACAGACTCACTCTCAAGGTCATCCTCATTGCCAATGAGAAGAGAATGTTAAGAT 1733
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85842931950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5