BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472755
Length=2303
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26540.1 | Symbols: | Agenet domain-containing protein | ch... 3328 0.0
AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724 6 ... 621 9e-177
AT1G03300.1 | Symbols: ATDUF1, DUF1 | DOMAIN OF UNKNOWN FUNCTIO... 534 1e-150
> AT1G26540.1 | Symbols: | Agenet domain-containing protein |
chr1:9167589-9170934 REVERSE LENGTH=2421
Length=2421
Score = 3328 bits (1802), Expect = 0.0
Identities = 2148/2315 (93%), Gaps = 23/2315 (1%)
Strand=Plus/Plus
Query 1 CAGAGTGAAATTTTAGGGTTTTACAAAAGAGCGGGTTTTTGCTTCCCTCTTTGCTTATTT 60
||||||||||||||||||||||||||||| | || |||||||||| ||||||||||||||
Sbjct 25 CAGAGTGAAATTTTAGGGTTTTACAAAAGGGAGGTTTTTTGCTTCACTCTTTGCTTATTT 84
Query 61 GGGATCTGGGTTTTGATTATTTCCGCAAAGTAACCACATTTTTCA-ATTCCGGAGATGGA 119
||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 85 GGGTTCTGGGTTTTGATTATTTCTACAAAGTAACCACATTTTTCACTTTCCGGAGATGGA 144
Query 120 GCAGCGAACGATGATGATGATGAAAGATTGTGAAGTTGAAGTCAGTTCTGAAGAAGAAGG 179
|| || |||||||| ||| | ||||||||||| ||||||||||||||||||||| |||||
Sbjct 145 GCTGCAAACGATGAAGATAACGAAAGATTGTGTAGTTGAAGTCAGTTCTGAAGAGGAAGG 204
Query 180 ATTCGAAGGTGCTTGGTTCAGAGCTATGTTAGAGGAAACCCCAGGGAACTCAGCTCGCAG 239
|||||||| ||||||||||||||| | |||||||||| ||||||||||||| |||||||
Sbjct 205 GTTCGAAGGAGCTTGGTTCAGAGCTGTTTTAGAGGAAAACCCAGGGAACTCATCTCGCAG 264
Query 240 AAAGCTTCGTGTTCGTTACTTGACGTTGCTCGACATGAACGGTTCGTCT-CCTCTAATCG 298
|||||||||||||||||||| ||||||||| |||||| ||||||||||| ||| ||||||
Sbjct 265 AAAGCTTCGTGTTCGTTACTCGACGTTGCTGGACATGGACGGTTCGTCTCCCT-TAATCG 323
Query 299 AACACATCGAACAGAGATTTATTCGACCTGTCCCTCCGGTGGAGAATCAACAAAAAGGCG 358
||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||
Sbjct 324 AACACATCGAACAGAGATTCATTAGACCTGTACCTCCGGAGGAGAATCAACAAAAAGACG 383
Query 359 CCGTTTTGGAGGAAGGTTCGCTGGTGGATGCTGACCACAAAGATGGATGGTGGACTGGTG 418
||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||
Sbjct 384 TCGTTTTGGAGGAAGGTTTGCTGGTGGATGCTGACCACAAAGACGGGTGGTGGACTGGTG 443
Query 419 TTGTCGTAAAGAAAGTGGAGGACGACAACTATTTGGTTTATTTTGATTTACCTCCTGACA 478
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 444 TTGTCGTAAAGAAAATGGAGGACGACAACTATTTGGTTTATTTTGATTTGCCTCCTGACA 503
Query 479 TTATACAGTTCGAGAGAAAGCAGTTGCGGACTCATCTTATCTGGACCGGTGGGACTTGGA 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TTATACAGTTCGAGAGAAAGCAGTTGCGGACTCATCTTATCTGGACCGGTGGGACTTGGA 563
Query 539 TCCAACCAGAAATTGAGGAATTGGATAAGTCCATGTTTAGCTCCGGGACAATGGTGGAAG 598
||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct 564 TCCAACCAGAAATTGAGGAATCGAATAAGTCCATGTTTAGCCCCGGGACAATGGTGGAAG 623
Query 599 TGTTTTCTACCAAAGAAGCTGTGTGGTCCCCTGCAATGGTAGTCAAAGAGATTGGTGTGG 658
|||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 624 TGTTTTCTGCCAAAGAAGCTGTGTGGTCCCCTGCAATGGTAGTCAAAGAGACTGATGTGG 683
Query 659 ATGATAAGAAGAAATTTATTGTGAAGGACTGGAATAGGTACCTGAGCTGCAATGGTGATG 718
|||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 684 ATGATAAGAAGAAATTCATTGTCAAGGACTGTAATAGGTACCTGAGCTGCAATGGTGATG 743
Query 719 ATGCGAGACCAAACAAGACTGTTGATTCTCGCCGTGTTAGACCCATACCGCCTCCTTCTT 778
| |||||||||| ||| | |||| |||| |||||||||||||||||||||||||||||||
Sbjct 744 AGGCGAGACCAACCAACATTGTTAATTCGCGCCGTGTTAGACCCATACCGCCTCCTTCTT 803
Query 779 CGGTTGACCAGTATACATTGTTGGAATGTGTAGAGACGTTTTGTGGTTTGGGATGGCATA 838
| |||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 804 CAGTTGACAAGTATGCATTGTTGGAATCTGTAGAGACGTTTTCTGGTTTGGGATGGCATA 863
Query 839 AAGGGCAGGTGAGGAAAATTCTCTCTGATAACCGTTACTCGGTTATTTTAGAGGCTACAA 898
||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct 864 AAGGGCAAGTGAGGAAAATTCTCTCTGAGAACCGTTACACGGTTAGATTAGAGGCTACAC 923
Query 899 AGCAGGAATCTACAATTAA-ACACTCAGATCTTAGGCCTGTCATGGTGTGGGAAGATGGA 957
||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 924 AGCAGGAATCTACAA-TAAGACACTCAGATCTTAGGCCTTTCATGGTGTGGGAAGATGGA 982
Query 958 GTTTGGCATAACGATCCAAAGCCAAAACCCATAAAAGAAACTTCTCCAAACATCTTGAAA 1017
|||||| ||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||
Sbjct 983 GTTTGGTATAACGATCTAAAGCAAAAACCCATAAAAGAAACTCCTCCAACCATCTTGAAA 1042
Query 1018 AGGAAGCCAATGCGATCTTGTTCTGCTGCTAAATCAATGACTCCTAAC-AGTGCCACTAA 1076
|||||||||||||| ||||||||||||||||| |||||||||||| || |||||||| ||
Sbjct 1043 AGGAAGCCAATGCGCTCTTGTTCTGCTGCTAAGTCAATGACTCCT-ACGAGTGCCACAAA 1101
Query 1077 GCATTTGAGAAGTTCCCTGAATCCTGACGAAATTAGCGAGACACTCACTAAAGCAAAATC 1136
|||||||||||||| ||||||| || | |||||||||||||||| ||||||||||||||
Sbjct 1102 GCATTTGAGAAGTTTCCTGAATTCTAAGGAAATTAGCGAGACACCCACTAAAGCAAAATT 1161
Query 1137 TGTAGCTGCCACTGA-AGAATTAGGAAAGAAGAAGGCTGATGCTGTGATGTATGACAAAA 1195
|||| |||||||| | |||||||||||| || |||||||||||||||||| |||||||||
Sbjct 1162 TGTATCTGCCACT-AGAGAATTAGGAAAAAACAAGGCTGATGCTGTGATGAATGACAAAA 1220
Query 1196 CTCATCTGGTCATAACCCCGCAAGTAACATCAATAGCCCCAGTCATAACAGCCACACCAT 1255
|||||||| |||||||||| |||| ||||||||||||||| |||||||||| ||||||||
Sbjct 1221 CTCATCTGCTCATAACCCCTCAAGAAACATCAATAGCCCCGGTCATAACAGTCACACCAT 1280
Query 1256 TGAAACAACTAGAGGCTGAAACAGAAGGAAATAAATCCCCAAAGAAGACACTTGAGCCAA 1315
||||||||| ||| |||||||| |||||||| ||||||||||||||||||| |||||||
Sbjct 1281 TGAAACAACAAGATGCTGAAACTGAAGGAAAAAAATCCCCAAAGAAGACACCTGAGCCAG 1340
Query 1316 TGAAGAATCAGAATGGCTTGGAAAATAGTTCAACTCAACACGAGATGCCTGAGGAGGAGA 1375
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 TGAAGCATCAGAATGGCTTGGAAAATAGTTCAACTCAACACGAGATGCCTGAGGAGGAGA 1400
Query 1376 ATAGCAACgaaaagagtagaaaaaggaaaagagaacaaaatcaaaaCTCTGACCTGAATG 1435
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1401 ATAGCAACGAAAAGAGTAGAAAAAGGAAAAGAGAACAAAATCAAAACTCTAACCTGAATG 1460
Query 1436 AAACTGATGAGACTTGCAATGGTTCAAAGGCTGGAATCAACGGTACAAGTGATAATATAC 1495
||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||
Sbjct 1461 AAACTGATGAGACTTGCAATGTTTCAAAGGCTGGGGTCAACGGTACAAGTGATACTATAC 1520
Query 1496 GTGTTGATGATGTTGATGATCAGCCTCTCTCTGCTTGGATAAATATACCTACAGTGCTAT 1555
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1521 GTGTTGATGATGTTGATGATCAGCCTCTCTCTTCTTGGATAAATATACCTACAGTGCTAT 1580
Query 1556 CCTCTGATCAGAGCTCGAATGTGGTGAATAATTCTGCTGCTGATGTTGAGGAAACTCAAG 1615
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1581 CCTCTGATCAGAGCTCGAATGTGGTGGATAATTCTGCTGCTGATGTTGAGGAAACTCAAG 1640
Query 1616 CAAAGGGTACACTAATAATTGAGCCTTTTACAAAGAATTTGCCATTTTGGAAAACATATG 1675
|||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1641 CAAAAGGTGCACTAACGATTGAGCCTTTTACAAAGAATTTGCCATTTTGGAAGACATATG 1700
Query 1676 AAACAGAGAAGGGATACAAGACAGTACCACAGAATCCTCATTTCAGCCCATTGTTCGAGT 1735
||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct 1701 AAATGGAGAAGGGATACAAGACAGTGCCACAGAATCCTCATTTTAGCCCGTTGTTGGAGT 1760
Query 1736 TCAAAGAAGATATCCGTGAATGGTCAGCAGTTGGTATGATGGTGAGTTTCTACGGGTTAT 1795
||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1761 TCAAAGAAGATATTCGTGAATGGTCAGCAGTTGGCATGATGGTGAGTTTCTATGGGTTAT 1820
Query 1796 TAGAAGAAGTGAAAAATCTGCAACTCGATGTTTCTTCCAGCAAACTAAGTAGCCTCAGTA 1855
|||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||||||||
Sbjct 1821 TAGAAGAAGTAAAAAAGCTGCAGCTCGATGTTTCTTCAAGCAAACTAGGTAGCCTCAGTA 1880
Query 1856 GTTCTTTTGCCGAGCTAGAGAAGCATGGTTTCGACGTTGCAACCCCTCAGTCACGGATAA 1915
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1881 CTTGTTTTGCCGAGCTAGAGAAGCATGGTTTCGACATTGCAACCCCTCAGTCACGGATAA 1940
Query 1916 ACAAAGTGTTGTCTCTCCAAGTTGGGCGAGCAAAGAAAGTGGAGGAAAGAAAATGTCTGG 1975
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1941 ACAAAGTGTTGTCTCTCCAAGTTGGGCGAGCAAAGAAAGTGGAGGAAAGGAAATGTCTTG 2000
Query 1976 AGAAGAGGATTGAAGCTGAAGAGATTGAAATGCAAAAATTTGAACACGAAATGGTTGAGG 2035
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2001 AGAAGAGGATTGAAGCTGAAGAGATTGAAATGCAAAAATTTGAACACGAGATGGTTGAGG 2060
Query 2036 TAGAACGTAAACTGTTGGAACTGAAGAGACAAGCAGAGGTTGCGAAAGAGAAGAAAGAAA 2095
||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2061 TAGAACGCAAAATGTTGGAACTGAAGAGACGAGCAGAGGTTGCGAAAGAGAAGAAAGAAG 2120
Query 2096 CGAAGAACCAAATGATTGTTGAAATGAAATCATGTGCAGAAACCATCGATCAAGAGATTG 2155
|| | || |||||||||| ||||||||||||| ||| |||||||| |||||||||||||
Sbjct 2121 CGGCGGACAAAATGATTGTCGAAATGAAATCATCTGCGGAAACCATTGATCAAGAGATTG 2180
Query 2156 CAGATGTGGAGCTGGAGTTTATAACATCTGTGTTGGCTCCGTGGTAATAAGTGAAAAGAA 2215
|| |||||||| ||||||||||||||||||||||||||||||||||| | | || |||
Sbjct 2181 CAAATGTGGAGTTGGAGTTTATAACATCTGTGTTGGCTCCGTGGTAA-A--T-AA--GAA 2234
Query 2216 AAACGATATTATGAATGACC--TCT-AAGCTCCTATTT-T---GGTAAAATGAAGTAGAT 2268
|| ||| | ||||||||||| ||| |||||| ||||| | |||||||||||||||||
Sbjct 2235 AA-CGAAACTATGAATGACCCCTCTTAAGCTCGTATTTATTTTGGTAAAATGAAGTAGAT 2293
Query 2269 GTAAGTAATCTGTCAAAGATCTTTAGCCCTTATGG 2303
|||||| |||||||||| |||||||| ||||||||
Sbjct 2294 GTAAGTGATCTGTCAAATATCTTTAGACCTTATGG 2328
> AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724
6 | chr2:19387020-19390234 FORWARD LENGTH=2459
Length=2459
Score = 621 bits (336), Expect = 9e-177
Identities = 1123/1480 (76%), Gaps = 146/1480 (10%)
Strand=Plus/Plus
Query 141 GAAAGATTGTGAAGTTGAAGTCAGTTCTGA-AGAAGAAGGATTCGAAGGTGCTTGGTTCA 199
||||| || |||||| ||||| |||| | ||||||||| || | || ||| |||||||
Sbjct 124 GAAAGGTTCTGAAGTGGAAGTGTCTTCT-ACAGAAGAAGGTTTTGCAGATGCATGGTTCA 182
Query 200 GAGCTAT-GT-TAGAGGAAACCCCAGGGAACTCAGCTCGCAGAAAGCTTCGTGTTCGTTA 257
||| ||| | | || ||| || | || |||| ||||| |||||| |||||||||||
Sbjct 183 GAGGTATCCTCCA-AGAAAATCCTA-CCAAATCAGGTCGCAAAAAGCTCCGTGTTCGTTA 240
Query 258 CTTGACGT-TGCTCGAC-ATGAACGGTTCGTCTCCTCTAATCGA-ACACATCGAACAGAG 314
|||||| | || | || | | ||| || ||||||||| ||||| | |||| |||| |||
Sbjct 241 CTTGAC-TCTGTTAAACGACG-ACGCTTTGTCTCCTCTTATCGAGA-ACATTGAACCGAG 297
Query 315 ATTTATTCGACCTGTCCCTCCGGTGGAGAATCAACAAAAAGGCGCCGTTTTGGAGGAAGG 374
||||||||||| || |||| ||||||| || | || || |||||||||||||||
Sbjct 298 GTTTATTCGACCGGT---TCCGCCGGAGAATGAATACAACGGTATCGTTTTGGAGGAAGG 354
Query 375 TTCGCTGGTGGATGCTGACCACAAAGATGGATGGTGGACTGGTGTTGTCGTAAAGAAAGT 434
|| |||| ||||||||||||||||| ||||||||||| ||||| | | |||||| |
Sbjct 355 AACGGTGGTTGATGCTGACCACAAAGACGGATGGTGGACCGGTGTCATTATTAAGAAATT 414
Query 435 GGAGGACGACAACTATTT-GGTTTATTTTGATT-TACCTCCTGACATTATACAGTTCGAG 492
|||| | | ||| | ||| |||||||| ||||| | || ||||||||||| ||||||||
Sbjct 415 GGAGAATGGCAAGT-TTTGGGTTTATTATGATTCT-CCACCTGACATTATTGAGTTCGAG 472
Query 493 AGAAAGCAGTTGCGGA-CTCATCTT-ATCTGGACCGGTGGGACTTGGATCCAACCAGAAA 550
||||| || ||| || ||||| || |||| ||||| ||| ||| ||| |||||| |
Sbjct 473 AGAAACCAATTG-AGACCTCAT-TTGCGCTGGTCCGGTTGGAAATGGCTCCGACCAGATA 530
Query 551 TTGAGGAATTGGATAAGTCCATGTTTAGCTCCGGGACAATGGTGGAAGTG--T--T-TTC 605
|| ||||||||||||||||||||||||||||||||||||||| ||||||| | | ||
Sbjct 531 TTCAGGAATTGGATAAGTCCATGTTTAGCTCCGGGACAATGGCGGAAGTGAGTACTATTG 590
Query 606 TACC-AAAG---AAGCTGTGTGGTCCCCTGCAATGGTAGTCAAAGAGATTGGTGTGGATG 661
|| |||| ||| || ||||| |||||| ||| || | |||||||||| |||||||
Sbjct 591 TAGATAAAGCTGAAGTTGCGTGGTTCCCTGCTATGATAATTAAAGAGATTGAAGTGGATG 650
Query 662 ATAAGAAGAAATTTATTGTGAAGGACTGGAATAGGTACCTGAGCTGCAATGGTGATGATG 721
| |||||||||| || ||||||||||| |||| || |||||| | ||||||||| |
Sbjct 651 GTGAGAAGAAATTCATCGTGAAGGACTGTAATAAACACTTGAGCTTTAGTGGTGATGAGG 710
Query 722 CGAGA-CCAAACAAG-ACTGTTGATTC-TCGCCGTGTTAGACCCATACCGCCTCCTTCTT 778
||||| |||| || | || ||||||| || |||||||||||||| ||||||||||| ||
Sbjct 711 CGAGAACCAA-CA-GTACCATTGATTCGTC-CCGTGTTAGACCCACACCGCCTCCTT-TT 766
Query 779 CG-GTTGACCAGTAT-ACATTGTTGGAAT-GTGTAGAGACGTTTTGTGGTTTGGGATGGC 835
| ||||| |||| | |||| |||| | |||| ||| |||| |||||| || |||||
Sbjct 767 CCAGTTGAAAAGTACGA-ATTGATGGA-TCGTGTGGAGGTGTTTCGTGGTTCGGTATGGC 824
Query 836 ATAAAGGGCAGGT--GAGGAAAATTCTCTCTGATAACCGTTAC-TCGGTTAT-TTTAGAG 891
| |||| ||| ||||| ||||| | | ||| ||||| | |||| | ||||| |
Sbjct 825 GTCAAGGTTTGGTAAGAGGAG--TTCTCGATCACAACTGTTACAT-GGTT-TGTTTAGTG 880
Query 892 GCTACAAAGCAGGAATCTACAA-TTAAACACTCAGATCTTAGGCCT-GTCATGGTGTGGG 949
| ||||||| ||||| | | ||||||||||||||||||||||| || | | ||||||
Sbjct 881 GTTACAAAGGAGGAACC-AGTGGTTAAACACTCAGATCTTAGGCCTTGTAAAG-TGTGGG 938
Query 950 AAGATGGAGTTTGGCATAACGATCCAAAGCCAAAACCCATAAAAGAAACTTCT-CCAAAC 1008
||||||| | || ||| || | | || |||||| || |||| |
Sbjct 939 AAGATGG-G-----CA-AACC--CCTGTG--A-------TA---GAAACTCCTTCCAA-C 976
Query 1009 ATCTTGAAAAGGAAGCCAATGCGATCTTGTTCTGCTGCTAAATCAATGACTCCTAACAGT 1068
|| |||||| |||||||||||| |||||||||| |||||| |||||||||||||| ||
Sbjct 977 GTCATGAAAACGAAGCCAATGCGCTCTTGTTCTGGTGCTAAGTCAATGACTCCTAAAAG- 1035
Query 1069 G-CCACTAAGCATTTGAGAAGTTCCCTGAATCCTGACGAAAT-TAGC-GAGACACTCACT 1125
| |||| || ||| ||||| || ||||||| ||| |||| | || |||||||||||
Sbjct 1036 GACCACAAAACATGCCAGAAGATCACTGAATCTTGA-GAAAAGT-GCAGAGACACTCACA 1093
Query 1126 AAAGCA-AAA-TCTGTAGCTGCCACTGAAGAATT-AGGAAAG-AAGAAGGCTGATGCTGT 1181
||||| ||| | | ||||||||||| |||||| || || | |||| |||| ||| |||
Sbjct 1094 AAAGCTGAAAGTA-G-AGCTGCCACTGGAGAATTGAG-AA-GTAAGAGGGCTAATGATGT 1149
Query 1182 GATGTA-TGACAAAACTCATCTGGTCATAACCCCGCAAGT-AA-C-A-T--C-------- 1226
|| || ||| || |||| ||||||||||||||| ||||| || | | | |
Sbjct 1150 TAT-TAATGATAATACTCCTCTGGTCATAACCCCACAAGTGAAACCAATAGCCTCTGTTG 1208
Query 1227 AA--T--AGCCCC------AGTCATAACAGCCACACCATTGAAACAA-CTAGAGGCTGAA 1275
|| | | |||| ||||| ||| || ||||| ||||||||| | | |||||||
Sbjct 1209 AACCTGTAACCCCTTCCCGAGTCAGAACTGCAACACCGTTGAAACAAACAA-AGGCTGAT 1267
Query 1276 ACAGAAGGAAA-TAAATCCCCAAAGAAGACACTTGAGCCAATGA-AGAATCAGAATGGCT 1333
|| ||||||| | ||||| |||||||||||||||||||||| ||| | | |||||||
Sbjct 1268 ACTCAAGGAAAGTCT-TCCCCCAAGAAGACACTTGAGCCAATGAGAGA-TGAAAATGGCT 1325
Query 1334 TGGAAAATAGTTCAACTCAACACGA-GATGCCTGAGGAGGAGAATAGC-AACgaa-aaga 1390
| |||||| | |||||| ||| || | | | ||||||| |||||||| || || |||
Sbjct 1326 TAGAAAAT--T-CAACTCGACA-GAAGGTACTTGAGGAGAAGAATAGCGAA--AAGAAGG 1379
Query 1391 gtagaaaaaggaaaagagaacaa-aatcaaaaCTCTGACCTGAATGAAACTGATGAGACT 1449
|||| ||||| |||||| || || || || ||||| ||||| || || |||||||||| |
Sbjct 1380 GTAGGAAAAGAAAAAGACAAGAAGAA-CACAACTCAGACCTTAAGGAGACTGATGAGAGT 1438
Query 1450 TGCAATGGTTCAAA-GGCTG-GAATCAACGGTACAAGTGATAATATACGTGTTGATGATG 1507
||||||||| |||| ||| | || |||| | |||||| | ||| | || | ||||
Sbjct 1439 TGCAATGGT-CAAATGGCCGAGA-TCAATGATACAAGC-AG--TAT-C-TGCA-ACGATG 1490
Query 1508 TTGATGATCAGCCTCTCTCTGCTTGGATAAATATACCTAC 1547
||||||||||||||||| |||||||||||||| | |||||
Sbjct 1491 TTGATGATCAGCCTCTCGCTGCTTGGATAAATTTGCCTAC 1530
> AT1G03300.1 | Symbols: ATDUF1, DUF1 | DOMAIN OF UNKNOWN FUNCTION
724 1 | chr1:811033-813086 REVERSE LENGTH=2013
Length=2013
Score = 534 bits (289), Expect = 1e-150
Identities = 731/933 (78%), Gaps = 76/933 (8%)
Strand=Plus/Plus
Query 1305 ACTTGAGCCAATGAAGAATCAGAATGGCTTGGA-AAATAG-TTCAACTCAACACGA-GAT 1361
||||||||| ||| |||||||||| |||| || |||| | |||||||||||| || | |
Sbjct 1122 ACTTGAGCCGATGCGGAATCAGAATTGCTT-GAGAAAT-GATTCAACTCAACA-GATGTT 1178
Query 1362 GCCTGAGGAGGAGAATAGCAACgaaaagagtagaaaaaggaaaagagaacaaaatca-aa 1420
||||||||||||||||||||| || ||| | ||||||||| |||||| |||| || ||
Sbjct 1179 GCCTGAGGAGGAGAATAGCAAAGACGGGAGCACAAAAAGGAAGAGAGAAGAAAAACACAA 1238
Query 1421 ---a-C-TC-T--GACCTGAATGAAACTGATGAGACTTGCAATGGTTCAAAGGCTG-GA- 1470
| | || | | || |||||| ||||| |||||| ||||||||| || ||| ||
Sbjct 1239 CTCAGCTTCTTCCGTTATGGATGAAATTGATGGGACTTGTAATGGTTCAGAGTCTGAGAT 1298
Query 1471 -A-TCA-AC-GGTACAAGTGATAAT--ATACGTGTTGATGATGTTGATGATCAGCCTCTC 1524
| | | || |||| |||| || | | || ||||||||||||||||||||| |||
Sbjct 1299 TAGTAATACAGGTAAAAGT-AT-CTGCA-AC--AATGATGATGTTGATGATCAGCCGCTC 1353
Query 1525 TCTGCTTGGATAAATATACCTACAGTGCTATCCTCTGATCAGAGCTCGAATGTGGTGAAT 1584
||| | | | | |||| | || | | ||||||||| || |||||||||
Sbjct 1354 TCTAC-T-G--------AGCTAC----C-AT-AT-T-ATCAGAGCTTGAGTGTGGTGAAC 1395
Query 1585 AATTCTGCTGCTGATGTTGAGGAAACTCAAGCAAAGGGTACACTAA-TAATTGAGCCTTT 1643
| || ||||||||||| |||||||||| ||||||| || ||| || | ||| |||||
Sbjct 1396 AGTTTTGCTGCTGATGCAGAGGAAACTCCAGCAAAGAGTGCACGAACT-ATTTCTCCTTT 1454
Query 1644 TACAAAGAATTTGCCATTTTGGAAAA-CATATGAAACAGA-GAAGGGATACAAGA-CAGT 1700
| ||||||| || || |||||||||| | ||||||||||| ||| | ||||| | || |
Sbjct 1455 TGCAAAGAAGTTACCGTTTTGGAAAAGC-TATGAAACAGATGAATTG-TACAA-ATCATT 1511
Query 1701 ACCACAGAA-TCCTCATTTCAGCCCATTGTTCGA-GTTCAAAGAAGATATCCGTGAATGG 1758
|||||| || ||||||||||||||| |||||| | | | |||||||||||||| ||||||
Sbjct 1512 ACCACA-AAGTCCTCATTTCAGCCCGTTGTTCAAGGCT-AAAGAAGATATCCGCGAATGG 1569
Query 1759 TCAGCAGTTGGTATGATGGTGAGTTTCTACGGGTTATTAGAA-GAAGTGAAAAATCTGCA 1817
|| || |||||||||||||||| |||||| | |||||| || ||||| ||| |||||||
Sbjct 1570 TCCGCGGTTGGTATGATGGTGACTTTCTATTGTTTATTA-AAGGAAGTCAAAGATCTGCA 1628
Query 1818 ACTCGATGTTTCTTCCAGCAAACTAAGTAGCCTCAGTAGTTCTTTTGCCGAGCTAGAGAA 1877
||||||| ||| || ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct 1629 GCTCGATGATTCCTCAAGCAAACTAAGTAGCCTCAGTAGTTCTTTGGCGGAGCTCGAGAA 1688
Query 1878 GCATGGTTTCGACGTTGCA-ACCCCTCAGTCACGGATAAACAAAGTGTTGTCTCTCCAAG 1936
||| |||||| ||||| || | || | ||||||||| | |||||||||| | |||||||
Sbjct 1689 GCACGGTTTCAACGTTACAGATCCATT-GTCACGGATCAGCAAAGTGTTGCCCCTCCAAG 1747
Query 1937 TTGGGCGAGCAAAGAAAGTGGAGGAAAGAAAATGTCTGGAGAAGAGGATTGAA-GCTGAA 1995
| |||||||||||||| |||||||||||||||||| ||||||| ||||||| | ||||
Sbjct 1748 ATAAGCGAGCAAAGAAAGCGGAGGAAAGAAAATGTCTTGAGAAGAAGATTGAATG-TGAA 1806
Query 1996 GAGATTGAAATGCAAAAA-TTTGAACACGAAATGGTTGAGGTAGAACGTA-AACTGTTG- 2052
||||| |||| | || | |||||| | || | | ||| | ||||| | || | |||
Sbjct 1807 GAGATCGAAAGG-AAGAGGTTTGAAGAAGAGTTTGCTGACTTTGAACGCATAATTATTGA 1865
Query 2053 GAACTGAAGAGACAAGCAGAGGTTGCGAAAGAGAAGAAAGAAACGAA-GAACCAAATGAT 2111
||| ||||||||||||| |||||| || |||||||||||| || || | ||| |||
Sbjct 1866 GAA--GAAGAGACAAGCATTGGTTGCCAAGGAGAAGAAAGAAGCGGCTGA-CAAAAGGAT 1922
Query 2112 TGTTGAAATGAA-ATCATGTGCAGAAACCATCGATCAAGAGATTGCAGATGTGGAGCTGG 2170
|| ||||||||| | |||||||||||||||| ||||||||||| ||||| |||||| |
Sbjct 1923 TGGTGAAATGAAGA-CATGTGCAGAAACCATTGATCAAGAGATCAAAGATGAGGAGCTTG 1981
Query 2171 AGTTT-ATAACATCTGTGTTGGCTCCGTGGTAA 2202
||||| | | || |||| | | |||| ||||||
Sbjct 1982 AGTTTCAGA-CAACTGTCTCGACTCCATGGTAA 2013
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114306640965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5