BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472789 Length=1049 Score E Sequences producing significant alignments: (Bits) Value AT1G26300.1 | Symbols: | BSD domain-containing protein | chr1:... 1580 0.0 AT1G69030.1 | Symbols: | BSD domain-containing protein | chr1:... 603 1e-171 > AT1G26300.1 | Symbols: | BSD domain-containing protein | chr1:9095900-9099754 REVERSE LENGTH=1082 Length=1082 Score = 1580 bits (855), Expect = 0.0 Identities = 985/1049 (94%), Gaps = 3/1049 (0%) Strand=Plus/Plus Query 3 GCAATGGAGGATCTATGGAAGAGAGCCAAATCGTTCGCAGAAGAAGCGGGTAAGAAATCT 62 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct 6 GCAATGGAGGATCTATGGAAGAGGGCAAAATCGTTCGCAGAAGAAGCGGGTAAGAAGTCT 65 Query 63 CAGACCATCACCCAATCATCCTCCGCGACGTTCGTCAATCTCGTCACCGAGACTGCTAAG 122 ||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 66 CAGACGATAACACAATCATCCTCCGCGACCTTCGTCAATCTCGTCACCGAGACTGCTAAG 125 Query 123 AAATCCAAGGAACTCGCTCTCGAAGCTTCTAAGAAAGCCGATCAATTCAATGTTTCCGAT 182 ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| Sbjct 126 AAATCCAAGGAACTCGCTCTCGAAGCTTCGAAGAAAGCTGATCAATTCAATGCCGCCGAT 185 Query 183 TTCGTTGCCGAAACGGCTAAAAAATCTAAAGAATTCGCTGCCGAAGCTTCAAAGAAGGCG 242 |||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct 186 TTCGTTGCTGAAACGGCTAAGAAATCCAAAGAATTCGCTGCTGAAGCTTCAAAGAAGGCG 245 Query 243 GATCAGTTCAAAGTCGCCGCGCTGAAGCAAGCTGATCAGATCCAGAACATCAAATCGATC 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 246 GATCAGTTCAAAGTCGCCGCGCTGAAACAAGCTGATCAGATCCAGAACATCAAATCGATC 305 Query 303 GCTGATATTATCGGGTCCGGGTCAGGATCAGGATCCGGTTCCGAAGCAGAGCTTCTCGAA 362 |||||||| |||||| ||||| | || |||||||||||||| ||||| |||||||||||| Sbjct 306 GCTGATATAATCGGGACCGGGACCGGGTCAGGATCCGGTTCAGAAGCGGAGCTTCTCGAA 365 Query 363 TTCGGTGTAACGGATGATTTGAGAGAGTTCGTTGAAGGCTTGACCTCTGCTACATTCCAA 422 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 366 TTCGGTGTAACGGATGATTTGAGAGAGTTCGCTGAAGGCTTGACCTCTGCTACATTCCAA 425 Query 423 GCTTTTCCTGAACAAGATCAACCGGATGAAGTTGCTGATGTGACAACGAATTCTTCGAAT 482 ||||||||||| ||||||||| |||||||||| | ||||||| ||| ||| |||||||| Sbjct 426 GCTTTTCCTGATCAAGATCAAGGGGATGAAGTTTCCGATGTGATAACAAATGCTTCGAAT 485 Query 483 GTTCGAAAGGATCTATCGGATTGGCAAGAGAGACATGCCACTCTGGTTCTAACCTCTGTC 542 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 GTTCGAAAGGATCTCTCGGATTGGCAAGAGAGACATGCCACTCTGGTTCTAACCTCTGTC 545 Query 543 AAGCAAATCTCCAAGTTAAGATACGAACTTTGCCCGCGATTCATGAAAGAAAGGAGGTTC 602 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 546 AAGCAAATCTCCAAGTTAAGATACGAACTTTGCCCTCGTTTCATGAAAGAAAGGAGGTTC 605 Query 603 TGGAGGATATATTTCACACTAGTGAGCACTCATGTTTCACCATATGAGAGGAGGTACATG 662 |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 606 TGGAGGATTTATTTCACACTAGTGAGCACTCATGTTTCTCCATATGAGAGGAAGTACATG 665 Query 663 GAGGCACTTAAGACCAAAGCAGAACATGAAAATGAAGAAGCTAAGAAGGCCCCAGCGACT 722 |||| |||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||| Sbjct 666 GAGGAACTTAAGACCAAAGGAGAGCATGGAAATGAAGAAGCTAAGAAGGCTCCAGCGACT 725 Query 723 GGAGAGACAGAAACAGTGGAAAAGAATGTTGCAATCAGTAGAACATCTACTGCGACTTCT 782 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| Sbjct 726 GGAGAGACAGAAACAGTAGAAAAGAATGTTGCAATCCGTAGAACATCTACTGCGTCTTCT 785 Query 783 GAGCAGGATCTGGATACATTCCTTTTGGGAGATCTCGAAGACAGTGATGGAA-CTCCAGA 841 ||||||||||||||||||||||| ||||| ||||| ||||||||||||| || ||||||| Sbjct 786 GAGCAGGATCTGGATACATTCCTGTTGGGTGATCTAGAAGACAGTGATG-AAGCTCCAGA 844 Query 842 TGATGGTGATGGAAGCCTTGAGGATGACTTTGACAAGATTGGAAACTCAGATGTTGAAGA 901 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 845 TGATGGTGATGGAAGCCTTGAGGATGACTTTGACAAGATTGGAAACTCAGATGTTGAAGA 904 Query 902 CGAGAAGCAATCAACTAAAGCTACAACAAATGCAGGAAACTAAGTGTCTTGTTAGTTT-A 960 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 905 CGAGAAGCAATCATCTAAAGCTACAACAAATGCAGGAAACGAAGTGTCTTGTTAGTTTTA 964 Query 961 ACATCCAATTAGAAAAAGGTAAATGAAGACGATGCTTGAAATGTATAGTTTTGATTTAGT 1020 | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 965 AGTTCCAATTAGAAAAGGGTAAATGAAGAAGATGCTTGAAATGTATAGTTTTGATTTAGT 1024 Query 1021 AAGGGACGCATAAGAAGACCGCGATTTCG 1049 ||| || ||||| ||||||| ||||||| Sbjct 1025 AAGTGATGCATACGAAGACCTTGATTTCG 1053 > AT1G69030.1 | Symbols: | BSD domain-containing protein | chr1:25947265-25949262 REVERSE LENGTH=1118 Length=1118 Score = 603 bits (326), Expect = 1e-171 Identities = 768/967 (79%), Gaps = 87/967 (9%) Strand=Plus/Plus Query 6 ATGGAGGATCTATGGAAGAGAGCCAAATCGTTCGCAGAAGAAGC-GGGTAAGAAATCTCA 64 ||||| ||||||||||||||||| |||||||| ||||||||||| | | |||||||| || Sbjct 1 ATGGAAGATCTATGGAAGAGAGCGAAATCGTTTGCAGAAGAAGCAGCG-AAGAAATCACA 59 Query 65 GACCAT--CAC-CCAATCATCCTCCGCGACGTTCGTCAATCTCGTCACCGAGACTGCTAA 121 ||||| ||| |||||||| || | || |||||||||||||||||||| || ||||| Sbjct 60 AACCATAACACTACAATCATCTTCAACAACATTCGTCAATCTCGTCACCGAAACCGCTAA 119 Query 122 GAAATCCAAGGAACTCGCTCTCGAAGCTTCTAAGAAAGCCGA-TCAATTCAATGTTTCCG 180 |||||||| || ||||||||||||||||||||||||| || || | ||||||| |||| Sbjct 120 AAAATCCAAAGAGTTCGCTCTCGAAGCTTCTAAGAAAGCTGATTCGA-TCAATGTCTCCG 178 Query 181 ATTTCGTTGCCGAAACGGCTAAAAAATCTAAA-GAATTCGCTGCCGAAGCTTCAAAGAAG 239 | ||||| ||||| ||||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 179 AGTTCGTCGCCGAGACGGCGAAGAAGTC-AAAGGAATTCGCTGCTGAGGTTTCAACGAAA 237 Query 240 GCGGATCAGTTCAAAGTCGCCGCGCTGAAGCAAGCTGATCAGATCCAGAACATCAAATCG 299 ||||||||| ||||||||| || |||| |||||||||||||||||||| || |||||| Sbjct 238 GCGGATCAGCTCAAAGTCGTAGCATTGAAACAAGCTGATCAGATCCAGAATATAAAATCG 297 Query 300 ATCGCTGATATTAT--C--G-GG--TCCG-GG-TCAGGATC---------AGGATCCG-G 340 || || || ||||| | | || | | || |||||||| || || | | Sbjct 298 ATTGCCGACATTATACCTGGAGGATTAGGAGGATCAGGATCTGGTGGTGGTGGTTCTGAG 357 Query 341 --TTCCGAAGCAGAGCTT-CTCGAATTCGGTGTAACGGATGATTTGAGAGAGTTCGTTGA 397 ||| ||| | |||||| | | || ||| | || ||||||||||||||||| ||| | Sbjct 358 ATTTCTGAATCTGAGCTTGTTAG-TTTTGGTATTACTGATGATTTGAGAGAGTTTGTTAA 416 Query 398 AGGCTTGACCTCTGCTACATTCCAAGCTTTTCCTGAACAAGATCAACCGGATGAAGTTGC 457 ||| ||||| |||||||| ||||| |||||||||||||||||| || || |||||| | Sbjct 417 AGGTTTGACATCTGCTACGTTCCAGGCTTTTCCTGAACAAGATGAATCGTCGGAAGTTTC 476 Query 458 TGATGT-GACAACGAA-TTCTTCGAATGTTCGAAAGGATCTATCGGATTGGCAAGAGAGA 515 |||| | || ||| || | | ||||||||||| |||||||| || || ||||| |||||| Sbjct 477 TGATTTGGA-AAC-AAGTGCGTCGAATGTTCGGAAGGATCTTTCTGAGTGGCAGGAGAGA 534 Query 516 CATGCCACTCTGGTTCTAACCTCTGTCAAGCAAATCTCCAAGTTAAGATACGAACTTTGC 575 ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||| ||| Sbjct 535 CATGCCACTCTTGTTCTTGGTTCTGTCAAGCAAATTTCGAAGTTGAGATATGAACTATGC 594 Query 576 CCGCGA-TTCATGAAAGAAAGGAGGTTCTGGAGGATATA-TTTCACACT-AGTGAGCACT 632 || ||| || ||||||||||||||||||||||||||||| ||| || || |||||||||| Sbjct 595 CCACGAGTT-ATGAAAGAAAGGAGGTTCTGGAGGATATACTTT-AC-CTTAGTGAGCACT 651 Query 633 CATGTTTCACCATATGAGAGGAGGTACATGGAGGCACTTAAGACCAAAGCAGA-ACATGA 691 |||||| |||||||||| |||| ||||||||||| ||||| || ||||||||| | | | Sbjct 652 CATGTTGCACCATATGAAAGGAAGTACATGGAGGAACTTAGGAACAAAGCAGAGAG-T-A 709 Query 692 AA-ATGAAGAAGCTAAGAAG-GCCCCAGCGACT-GGAGAG-ACAGAAACAG-TGGAAAAG 746 || ||||||||||||||||| | || || | || ||| || |||||| ||| || ||||| Sbjct 710 AAGATGAAGAAGCTAAGAAGAGTCC-AGGG-CTTGGA-AGGACAGAATCAGCTG-AAAAG 765 Query 747 AATGTTGCAATCAGTAGAACATCTACTGCGA-CTTCTGAGCAGGATCTGGATACATTCCT 805 || || | | | ||||||||| | | |||||||| ||||| ||||||||||| Sbjct 766 AA-----CA----G-A-AT-ATCTACTGC-ATCGTCTGAGCAAGATCTCGATACATTCCT 812 Query 806 TTTGGGAGATCTCGAAGACAGTGATGGAA-CTCC--A-GATG---ATGGTGATG--G-A- 854 |||||||||| ||||||||||| | || |||| | |||| ||||||||| | | Sbjct 813 GCTGGGAGATCTAGAAGACAGTGACG-AAGCTCCTGATGATGGTGATGGTGATGATGGAG 871 Query 855 -A-GCCT---TGAGGATGACTTTGACAAGATTGGAAACTCAGATGTTGAAGACGAGAA-G 908 | |||| ||| |||||||||||||||||||| ||||| |||||||| || ||||| | Sbjct 872 GAAGCCTGGGTGATGATGACTTTGACAAGATTGGCAACTCTGATGTTGAGGAAGAGAAAG 931 Query 909 CAATCAA 915 |||||| Sbjct 932 -AATCAA 937 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51439766528 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5