BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472802
Length=2704
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26150.1 | Symbols: ATPERK10, PERK10 | proline-rich extensin... 2669 0.0
AT1G68690.1 | Symbols: | Protein kinase superfamily protein | ... 1022 0.0
> AT1G26150.1 | Symbols: ATPERK10, PERK10 | proline-rich extensin-like
receptor kinase 10 | chr1:9039628-9043288 REVERSE LENGTH=2866
Length=2866
Score = 2669 bits (1445), Expect = 0.0
Identities = 1895/2101 (90%), Gaps = 75/2101 (4%)
Strand=Plus/Plus
Query 568 CCTCCTCCTCCGGTGACTCCAGTATCATCACCACCACCAGAACCTTCTCCCCCACCACCG 627
|||||||| || || ||||||||| | || ||||||||||||||||||||||||||
Sbjct 668 CCTCCTCCGACGACGATTCCAGTATC-T--CCTCCACCAGAACCTTCTCCCCCACCACCT 724
Query 628 ACACCAACTGGAGCTCCTCCTCCGGCGATTCTTGTATCATCTCCACCACCAGAACCTTCT 687
|||||||| |||||||||||| |||| || |||||||| || ||||||||| |||||
Sbjct 725 TTACCAACTGAAGCTCCTCCTCCAGCGAATCCAGTATCATCACCTCCACCAGAATCTTCT 784
Query 688 CCCCCGCCACCTCCACCAACAGAAGCTCCT-C--CTACTCCTACTACATCACCCAGCCCG 744
|||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||
Sbjct 785 CCCCCGCCACCTCCACCAACTGAAGCTCCTCCTACTACTCCTATTACATCACCCAGCCCG 844
Query 745 CCAACAAacccaccaccaccaccacttgagacctctccccctccacgtccaccaccTGAT 804
|||||||| ||||||||||||| | || |||| | | | ||| |||||
Sbjct 845 CCAACAAA---TCCACCACCACCAC-CG-GA----AAGCCCT-C-C-TTCACTACCTG-- 890
Query 805 CAACCATCCGTTCCACCACCGGAAAGCCCTCCTT-CACCACCT--GCTCCAGACCCTCCA 861
| |||| | || ||| | || || ||| |||||||| | | || ||| |||
Sbjct 891 C-ACCA---GACCCTCCA--AGCAA-TCC-ACTTCCACCACCTAAG-T-TAGTCCCACCA 940
Query 862 AGAAATCCACCTCCAC--CACCTACATTTGAC-CCA-CCATCAG---TT-CT--TCCTCC 911
| || ||||||||| || ||| || | ||| || |||| || || ||||||
Sbjct 941 TCACATTCACCTCCACGTCATTTACCTTCCCCGCCAGCC-TCAGAAATTCCTCCTCCTCC 999
Query 912 ACGCCGTTCCCCTCCCCCACCAACCTCAGTACGTCC-TC--CTCCACAACATCCAAAACT 968
||| | || ||| |||||||| |||||| |||||| || |||| | ||| | | | |
Sbjct 1000 ACGTCATTTACCTTCCCCACCAGCCTCAGAACGTCCTTCAACTCCTC--CAT-C-AGA-T 1054
Query 969 TCCTGAGAA-A-CCTCCTCCTCCTCCACC-GGG--TTCTAAACGTCCTGCTCCTTCACCT 1023
| | |||| | ||| |||||||||| || ||| | | ||||||| || | ||||
Sbjct 1055 T-C--AGAACATCCTTCTCCTCCTCCTCCAGGGCATCCAAAACGTCGTG-AGC--AACCT 1108
Query 1024 CCTTCTCCAAGTGACTCAAAACGTCCTGTGCATCCTTCACCTCCTTCTCCAAGTGACTCA 1083
||| | || | | || |||||||| | | ||| ||||||||||||||||||||||||
Sbjct 1109 CCTCCACC--G-GGTTCTAAACGTCC--TAC-TCCATCACCTCCTTCTCCAAGTGACTCA 1162
Query 1084 AAACGTCCTGTGCATCCCTCACCTCCTTCTCCACCAGAGGAAACTCTCCCACCTCCCAAG 1143
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163 AAACGTCCTGTGCATCCTTCACCTCCTTCTCCACCAGAGGAAACTCTCCCACCTCCCAAG 1222
Query 1144 CCAAGTCCAGATCCCTTACCTTCTAATTCGTCTTCATCACCAACATCGCCTCCACCACCC 1203
|||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |
Sbjct 1223 CCAAGTCCAGATCCCTTACCTTCTAATTCGTCTTCACCACCAACATTGCTTCCACCATCG 1282
Query 1204 TCAGTTGTATCCCCGCATTTAG-CTCCTC-AAATATCTGTGCCAGGTCCTGATAATCCAT 1261
|||||||||||||||| || | |||||| ||| ||||||| ||||||||||||||||||
Sbjct 1283 TCAGTTGTATCCCCGC-CTTCGCCTCCTCGAAA-ATCTGTGTCAGGTCCTGATAATCCAT 1340
Query 1262 CTCGAAACAACCCTACTCCTTTGACAGAAAATTCCAGCAATTCTGGTATTAATACAGCAG 1321
||| ||||||||| |||||| ||||||| |||||||||| ||||||||||| || ||| |
Sbjct 1341 CTCCAAACAACCCCACTCCTGTGACAGATAATTCCAGCAGTTCTGGTATTAGTATAGCGG 1400
Query 1322 CTGTTGTGGGTGTAAGTATTGGAGTGGCCCTAGTGCTGCTTAGTCTTATTGGAGTTATTG 1381
||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||
Sbjct 1401 CTGTTGTGGGTGTAAGTATTGGAGTGGCCCTTGTGCTGCTTACTCTCATTGGAGTTGTTG 1460
Query 1382 TCTGGTGCTTAAAGAAACGAAAAAAGAGGCTCTCAACCATTGGTGGTGGCTATGTTATGC 1441
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1461 TCTGTTGCTTAAAGAAACGGAAAAAGAGGCTCTCAACCATTGGTGGTGGCTATGTTATGC 1520
Query 1442 CAACACCTATGGATTCCTCCTCCCCAAGATCAGATTCAGCGCTTCTGAAGACGCAGTCAT 1501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 CAACACCTATGGAATCCTCCTCCCCAAGATCAGATTCAGCGCTTCTGAAGACGCAGTCAT 1580
Query 1502 CCGCACCTCTAGTGGGAAATCGTTCTAGCAATCGAACATACTTTTCACAATCAGAGCCTG 1561
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1581 CCGCACCTCTAGTGGGAAATCGTTCTAGCAATCGTACATACTTATCACAATCAGAGCCTG 1640
Query 1562 GTGGTTTTGGTCAATCGAGGGAACTGTTCTCATATGAAGAACTTGTCATAGCAACAAATG 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 GTGGTTTTGGTCAATCGAGGGAACTGTTCTCATATGAAGAACTTGTCATAGCAACAAATG 1700
Query 1622 GATTCTCAGATGAAAATCTATTGGGTGAAGGTGGATTTGGTCGTGTGTATAAAGGAGTCT 1681
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1701 GATTCTCTGATGAAAATCTCTTGGGTGAAGGTGGATTTGGTCGTGTGTATAAAGGAGTTT 1760
Query 1682 TACCAGATGAAAGAGTGGTTGCTGTGAAACAATTAAAAATAGGTGGAGGACAAGGTGACC 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1761 TACCAGATGAAAGAGTGGTTGCTGTGAAACAATTAAAAATAGGTGGAGGACAAGGTGACC 1820
Query 1742 GAGAGTTCAAAGCCGAGGTTGAGACCATTAGCAGGGTACATCACCGGAATTTGCTTTCTA 1801
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1821 GAGAGTTCAAAGCCGAGGTTGATACCATAAGCAGGGTACATCACCGGAATTTGCTTTCTA 1880
Query 1802 TGGTTGGATACTGCATTTCCGAGAACCGGAGATTGCTTATTTATGATTATGTCCCTAATA 1861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1881 TGGTTGGATACTGCATTTCCGAGAACCGGAGATTGCTTATTTATGATTATGTCCCTAACA 1940
Query 1862 ACAACCTTTACTTCCATCTTCACGCCGCAGGAACTCCGGGTCTAGACTGGGCAACACGTG 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1941 ACAACCTTTACTTCCATCTTCACGCCGCAGGAACTCCGGGTCTAGACTGGGCAACACGTG 2000
Query 1922 TTAAAATTGCTGCTGGTGCGGCTCGTGGACTAGCTTATCTCCATGAAGATTGTCATCCTC 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2001 TTAAAATTGCTGCTGGTGCGGCTCGTGGACTAGCTTATCTCCATGAAGATTGTCACCCTC 2060
Query 1982 GTATCATACACAGGGACATTAAATCATCCAACATTCTCTTAGAGGATAACTTCCACGCTC 2041
|||||||||| |||||||| ||||||||||||||||||||||| |||||||||| || |
Sbjct 2061 GTATCATACATAGGGACATCAAATCATCCAACATTCTCTTAGAAAATAACTTCCATGCCC 2120
Query 2042 TGGTTTCTGACTTCGGCCTTGCAAAGCTAGCTCTCGACTGTAACACACATATTACAACTC 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2121 TGGTTTCTGACTTCGGCCTTGCAAAGCTAGCTCTCGACTGTAACACACATATTACAACTC 2180
Query 2102 GGGTTATGGGAACATTCGGATACATGGCTCCTGAATATGCATCAAGTGGCAAATTAACCG 2161
|||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 2181 GGGTCATGGGAACATTCGGCTACATGGCTCCGGAATATGCATCAAGTGGCAAATTAACCG 2240
Query 2162 AAAAATCAGACGTATTCTCCTTTGGCGTTGTTCTACTGGAGTTAATCACTGGACGTAAGC 2221
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2241 AGAAATCAGACGTATTCTCCTTTGGGGTTGTTCTACTGGAGTTAATCACTGGACGTAAGC 2300
Query 2222 CCGTGGATACATCCCAACCTCTGGGAGATGAGAGCCTTGTTGAATGGGCTCGTCCTTTGC 2281
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2301 CTGTGGATGCATCCCAACCTCTGGGAGATGAGAGCCTTGTTGAATGGGCTCGTCCTTTGC 2360
Query 2282 TTAGTCATGCCATTGAAACCGAAGATTTTACAGCTTTGGCAGATCCCAAGCTAGGTAGAA 2341
||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2361 TTAGTAATGCCACTGAAACCGAAGAGTTTACAGCTTTAGCAGATCCCAAGCTAGGTAGAA 2420
Query 2342 ACTATGTTGGTGTTGAAAT-TTTCAGAATGATTGAAGCAGCGGCAGCTTGTATTCGCCAT 2400
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 2421 ACTATGTTGGTGTTGAAATGTTT-AGAATGATTGAAGCAGCGGCAGCTTGTATTCGCCAT 2479
Query 2401 TCAGCTGCAAAGAGACCTCGAATGAGTCAAATTGTGAGAGCTTTCGACAGTCTAGCTGAG 2460
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2480 TCAGCTACAAAGAGACCCCGAATGAGTCAAATTGTGAGAGCTTTCGACAGTCTAGCTGAG 2539
Query 2461 GAAGACCTCACCAATGGAATGAGACTAGGCGAAAGCGAAATCATCAACTCAGCTCAGCAG 2520
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2540 GAAGACCTCACCAATGGAATGAGACTAGGCGAAAGCGAAATAATCAACTCAGCTCAACAG 2599
Query 2521 TCTGCAGAAATCAGATTGTTTAGAAGAATGGCTTTTGGTAGCCAAAACTACAGTACAGAT 2580
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2600 TCTGCAGAAATCAGATTGTTTAGAAGAATGGCTTTTGGCAGCCAAAACTACAGTACAGAT 2659
Query 2581 TCTTTCACTCGTATTAGTAATATAAGCAAAGATGAAAACGTGTGAATATCAGAAACAAAA 2640
||||| ||||||| |||| |||||||||||||||||||| ||| ||||| ||||||||||
Sbjct 2660 TCTTTAACTCGTAATAGTTATATAAGCAAAGATGAAAACTTGTAAATATGAGAAACAAAA 2719
Query 2641 C 2641
|
Sbjct 2720 C 2720
Score = 634 bits (343), Expect = 1e-180
Identities = 827/1037 (80%), Gaps = 128/1037 (12%)
Strand=Plus/Plus
Query 1 TAATAGCTAACTGTAGACTTGGGTTTTGACTAGCGGAGG-AA-GTTT--T----TG-GT- 50
|||||||| |||||||| |||||||||||||||| |||| || ||| | || ||
Sbjct 4 TAATAGCTCACTGTAGAGTTGGGTTTTGACTAGCAGAGGAAATTTTTGGTGAAGTGTGTG 63
Query 51 GTC-C-AAGGAAAAGCTC-TTATTCAGATCCGAACAAGTTTGCAtttttttCATCTTATC 107
||| | |||||||||||| |||| ||||||||||||||||||||||||| |||||| |||
Sbjct 64 GTCTCGAAGGAAAAGCTCTTTATACAGATCCGAACAAGTTTGCATTTTTGTCATCTAATC 123
Query 108 AG--------G-TAATCTGGAATTTGCATAATTGGTGATCTGGGTTTTATC----T-GT- 152
|| | | ||||||||||||||| ||||||||||||||||||||| | ||
Sbjct 124 AGATAATCTCGCTTATCTGGAATTTGCATTATTGGTGATCTGGGTTTTATCTGTTTAGTG 183
Query 153 TT--A----G-TGT-----TATTTAGGGTTGAAATAATAAAAACAGTGTTGAGTGATGTG 200
|| | | ||| ||||||||||| |||| || | ||||||||||||||||||
Sbjct 184 TTGAAGCCTGTTGTCCGAGTATTTAGGGTTCAAATTAT-AGTACAGTGTTGAGTGATGTG 242
Query 201 TGGTTTTTAGTTGGTGCTTGGAGGTTACTGTCATACTCAAGTCTTGGGAATTTTGGTTTC 260
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 243 TGGTTTTTAGTTGGTGCTTGGAGGTTACTGTCATACTCAAGTC-TGGGAATTTTTGTTTC 301
Query 261 TTCTTCtttttttAATAATTTCTCTTAGTAAAGTAAGTGACGCTGATTGTTCGAATTTCA 320
| || ||| |||||||||||||||||||||||||||||||| || |||||| |||||||
Sbjct 302 -T-TT-TTTGTTTAATAATTTCTCTTAGTAAAGTAAGTGACGGTGTTTGTTC-AATTTCA 357
Query 321 GTTTTTGATC-----A------CT-----AGA--CTAGAATCTGGTCTTGGGATTTAGAT 362
|||||||||| | | ||| |||||||||||||||||||||||||
Sbjct 358 GTTTTTGATCAGAAGAGTGTTGGTGAAGAAGATGTTAGAATCTGGTCTTGGGATTTAGAT 417
Query 363 GACTACACCTGCACAGGCTCCTACGCAGGAGGTGTCACTGTCTCCACCATTAGCATCCCC 422
||||||||||||||||||||||| | |||||||||||||||||||| |||| |
Sbjct 418 GACTACACCTGCACAGGCTCCTAGGGAGGAGGTGTCACTGTCTCCATCATT-G------- 469
Query 423 ACCGCCATTGTCTCAGCAGCCTCCACCAATGGCGTTGCCTCCACCGCAGCCTTCCTTTCC 482
| | | || | ||||||| ||||||||||||||||||||||||||| |||||
Sbjct 470 ---G-C---G--TC--C--CCTCCACTAATGGCGTTGCCTCCACCGCAGCCTTCGTTTCC 516
Query 483 CGGTGATAATGCCACTTCCCCAACTAGAGAGCCCACTCATGGCAATCCACCGGATACCCC 542
||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| |
Sbjct 517 CGGTGATAATGCCACTTCCCCAACTAGAGAGCCCACTAATGGCAATCCACCAGAGACCAC 576
Query 543 AAACACCCCAGCTCAGTCTTCTCCTCCTCCTCCTCCGGTGACTCCAGTATCATCACCACC 602
||||||||||||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct 577 AAACACCCCAGCTCAGTCTTCTCCTCCTCCT-----GA-GACTCCACTATCATCACCACC 630
Query 603 ACCAGAACCTTCTCCCCCACCACCGACACCAACTGGAGCTCCTCCTCCGGCGATTCTTGT 662
||||||||||||||||||| |||| ||| ||||||| ||||||| || |||||| ||
Sbjct 631 ACCAGAACCTTCTCCCCCATCACCTTCACTAACTGGACCTCCTCCGACGACGATTCCAGT 690
Query 663 ATCATCTCCACCACCAGAACCTTCTCCCCCGCCACCTCCACCAACAGAAGCTCCTCCT-- 720
||| || | |||||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct 691 ATC-TC-CT-CCACCAGAACCTTCTCCCCCACCACCTTTACCAACTGAAGCTCCTCCTCC 747
Query 721 A-C---TCCTACTA-CATCACC-C-AGCCCGC--CAACAAacccaccaccaccacca-ct 770
| | ||| | || ||||||| | | || | | | ||| ||||| |||||| ||
Sbjct 748 AGCGAATCC-AGTATCATCACCTCCA-CCAGAATCTTCTCCCCCGCCACCTCCACCAACT 805
Query 771 tgagacctc-tccc-c--ctcc-a---cgtccacc-a-ccTGATCAACCA-TCCGTT-CC 818
|| | ||| ||| | |||| | | || ||| | || | |||| | ||| ||
Sbjct 806 -GA-AGCTCCTCCTACTACTCCTATTACATC-ACCCAGCCCGC-CAACAAATCCACCACC 861
Query 819 ACCACCGGAAAGCCCTCCTTCACCACCTGCTCCAGACCCTCCAAGAAATCCACCTCCACC 878
||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct 862 ACCACCGGAAAGCCCTCCTTCACTACCTGCACCAGACCCTCCAAGCAATCCACTTCCACC 921
Query 879 ACCTACATTT-GACCCACCATCAG-TTCTTCCTCCACGCCGTTCCCCTCCCCCACCAACC 936
||||| | || | |||||||||| ||| |||||||| | || ||| |||| ||| ||
Sbjct 922 ACCTA-AGTTAGTCCCACCATCACATTCA-CCTCCACGTCATTTACCTTCCCCGCCAGCC 979
Query 937 TCAGTACGTCCTCCTCC 953
|||| | |||||||||
Sbjct 980 TCAGAAATTCCTCCTCC 996
Score = 158 bits (85), Expect = 3e-37
Identities = 116/130 (89%), Gaps = 6/130 (5%)
Strand=Plus/Plus
Query 945 TCCTCCTCCACAACATCCAAAACTTCCTGAGAAACCTCCTCCTCCTCCACCGGGTTCTAA 1004
|||||||||| |||||||||| || |||| || ||||||||||||||||||||
Sbjct 1072 TCCTCCTCCAGGGCATCCAAAACGTCGTGAGCAA------CCTCCTCCACCGGGTTCTAA 1125
Query 1005 ACGTCCTGCTCCTTCACCTCCTTCTCCAAGTGACTCAAAACGTCCTGTGCATCCTTCACC 1064
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1126 ACGTCCTACTCCATCACCTCCTTCTCCAAGTGACTCAAAACGTCCTGTGCATCCTTCACC 1185
Query 1065 TCCTTCTCCA 1074
||||||||||
Sbjct 1186 TCCTTCTCCA 1195
> AT1G68690.1 | Symbols: | Protein kinase superfamily protein
| chr1:25788608-25792324 FORWARD LENGTH=3050
Length=3050
Score = 1022 bits (553), Expect = 0.0
Identities = 1081/1331 (81%), Gaps = 55/1331 (4%)
Strand=Plus/Plus
Query 1321 GCTGTTGTGGGTGTAAGTATTGGAGTGGCCCTAGTGCTGCTT-AGTCTTATTGG-AGT-T 1377
|||||||| ||| | ||| | | ||| || || ||| | ||| | |||| |||| | | |
Sbjct 1422 GCTGTTGTTGGTATCAGTGTAGCAGTAGCACTTGTGGT-CTTCACTCTTTTTGGTA-TCT 1479
Query 1378 ATTGTCTGGTGCTTAAAGAAACGA-AAAAAGAGGCTCTCAACCATTGGTGGTGGCTATGT 1436
||||||||||||| | ||||||| ||||| | || ||| | || |||||||| ||||
Sbjct 1480 -TTGTCTGGTGCTTGAGGAAACGAGAAAAA-CGCCTTTCAGCTGTTAGTGGTGGCGATGT 1537
Query 1437 TATGCCAACACCTATGGATTCCTCCT-CCCCAAGATCAGATTCAGCGCTTCTGAAGACGC 1495
|| ||| |||| || || || || || |||||||||||||||| || | | || ||
Sbjct 1538 TACACCATCACCAAT-GA--GCT-CTACCGCAAGATCAGATTCAGCATTTTTTAGGATGC 1593
Query 1496 AGTCATCCGCACCTCTAGTGG-GAAATCGTTCTAGCAATCGAACATACTTTTCACAATCA 1554
||||||| |||||| | ||| | || | | ||| ||| | | || | ||||||
Sbjct 1594 AGTCATCTGCACCTGT--TGGAGCAA--G--CAAGCGTTCGGGC--AGTTAT--CAATCA 1643
Query 1555 -GAGCCTGGTGGTTTTGGTCAA-TCGAGGGAACTGTTCTCATATGAAGAACTTGTCATA- 1611
| || ||||| || || ||| |||| | | |||| || |||||||||||||| | |
Sbjct 1644 CAATCC-GGTGGCTTAGG-CAATTCGAAAGCATTGTTTTCCTATGAAGAACTTGTGA-AG 1700
Query 1612 GCAACAAATGGATTCTCAGATGAAAATCTATTGGGTGAAGGTGGATTTGGTCGTGTGTAT 1671
||||||||||| || ||| | ||||||||||| |||||||||||||||||| |||| |||
Sbjct 1701 GCAACAAATGGTTTTTCACAAGAAAATCTATTAGGTGAAGGTGGATTTGGTTGTGTATAT 1760
Query 1672 AAA-GGAGTCTTACCAGATGAAAGAGTGGTTGCTGTGAAACAATTAAAAATAGGTGGAGG 1730
||| ||| | ||||| |||| ||||| ||||||||||||||| |||| || ||||||||
Sbjct 1761 AAAGGGA-TATTACCTGATGGGAGAGTAGTTGCTGTGAAACAACTAAAGATCGGTGGAGG 1819
Query 1731 ACAAGGTGACCGAGAGTTCAAAGCCGAGGTTGAGAC-CATTAGCAGGGTACATCACCGGA 1789
|||||||||| | ||||| |||||||| ||||| || | ||||||| | ||||||||
Sbjct 1820 ACAAGGTGACAGGGAGTTTAAAGCCGAAGTTGAAACTC-TTAGCAGAATTCATCACCGCC 1878
Query 1790 ATTTGCTTTCTATGGTTGGATACTGCATTTC-CGAGAACCGGAGATTGCTTATTTATGAT 1848
||||| |||| || || ||| | || || || | | |||| ||||||||||| ||||||
Sbjct 1879 ATTTGGTTTCAATCGTGGGACATTGTATCTCTGGTG-ACCGTAGATTGCTTATCTATGAT 1937
Query 1849 TATGTCCCTAATAACAACCTTTACTTCCATCTTCACGCCGCAG-GAACTCCGGGTCTAGA 1907
||||| |||| || ||||||||||||| ||||| | | || || | | | ||||||
Sbjct 1938 TATGTTTCTAACAATGACCTTTACTTCCACCTTCATG--G-AGAAAAAT-CTGTTCTAGA 1993
Query 1908 CTGGGCAACACGTGTTAAAATTGCTGCTGGTGCGGCTCGTGGACTAGCTTATCTCCATGA 1967
|||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||
Sbjct 1994 CTGGGCAACACGTGTTAAAATTGCGGCTGGGGCAGCTCGTGGACTAGCTTATCTTCATGA 2053
Query 1968 AGATTGTCATCCTCGTATCATACACAGGGACATTAAATCATCCAACATTCTCTTAGAGGA 2027
|||||||||||| |||||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 2054 AGATTGTCATCCGCGTATCATTCACAGGGACATCAAGTCGTCTAACATTCTTTTAGAGGA 2113
Query 2028 TAACTTCCACGCTCTGGTTTCTGACTTCGGCCTTGCAAAGCT-AGCTCTCGACTGTAACA 2086
||||| | |||| |||||||||||| |||||||||| | | |||||| || |||||||
Sbjct 2114 CAACTTTGATGCTCGGGTTTCTGACTTTGGCCTTGCAA-GATTAGCTCTTGATTGTAACA 2172
Query 2087 CACATATTACAACTCGGGTTATGGGAACATTCGGATACATGGCTCCTGAATATGCATCAA 2146
| ||||| || || ||||| || |||||||| || || ||||||||||||||||||||||
Sbjct 2173 CTCATATCACCACACGGGTCATCGGAACATTTGGCTATATGGCTCCTGAATATGCATCAA 2232
Query 2147 GTGGCAAATTAACCGAAAAATCAGACGTATTCTCCTTTGGCGTTGTTCTACTGGAGTTAA 2206
|||| |||||||| || |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 2233 GTGGAAAATTAACAGAGAAATCAGATGTATTCTCCTTTGGGGTTGTTCTGCTGGAGTTAA 2292
Query 2207 TCACTGGACGTAAGCCCGTGGATACATCCCAACCTCTGGGAGATGAGAGCCTTGTTGAAT 2266
||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 2293 TCACTGGACGTAAACCGGTGGATACATCGCAACCACTGGGAGATGAGAGCCTTGTTGAAT 2352
Query 2267 GGGCTCGTCCTTTGCTTAGTCATGCCATTGAAACCGAAGATTTT-ACAGCTTTGGCAGAT 2325
|||| || |||||| | ||||||||||| |||||||| || ||| | |||| ||||||
Sbjct 2353 GGGCCCGGCCTTTGATAAGTCATGCCATAGAAACCGAGGAATTTGATT-CTTTAGCAGAT 2411
Query 2326 CCCAAGCTAGGTAG-AAACTATGTTGG-TGTTGAAAT-TTTCAGAATGATTGAAGCAGC- 2381
|| ||||| || || ||||||||| | | | ||||| ||| |||||||||||||||||
Sbjct 2412 CCTAAGCTTGG-AGGAAACTATGTAGAATCT-GAAATGTTT-AGAATGATTGAAGCAGCA 2468
Query 2382 GGCAGCTTGTATTCGCCATTCAGCTGCAAAGAGACCTCGAATGAGTCAAATTGTGAGAGC 2441
|| ||| || | || |||| |||| | ||||||||||| ||| | ||||||||||||||
Sbjct 2469 GG-AGCCTGCGTGCGGCATTTAGCTACCAAGAGACCTCGGATGGGACAAATTGTGAGAGC 2527
Query 2442 TTTCGACAGTCTAGCTGAGGAAGACCTCACCAATGGAATGAGACTAGGCGAAAGCGAAAT 2501
||| || ||| |||||| ||||||||| || || ||||||||||||||||||||||| |
Sbjct 2528 TTTTGAAAGTTTAGCTGCGGAAGACCTTACTAACGGAATGAGACTAGGCGAAAGCGAGGT 2587
Query 2502 CATCAACTCAGCTCAGCAGTCTGCAGAAATCAGATTGTTTAGAAGAATGGCTTTTGGTAG 2561
| | ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct 2588 CTTTAACTCAGCTCAACAGTCAGCAGAGATCAGATTGTTTAGAAGAATGGCATTTGGTAG 2647
Query 2562 CCAAAACTACAGTACAGATTCTTTCACTCGTATTAGTAATA-TAAGCAAAGATGAAAACG 2620
|||||| ||||||||||||| |||| | | || |||| | | || ||| ||| | |||||
Sbjct 2648 CCAAAATTACAGTACAGATTTTTTCTCGCATAGTAGTTACAATA-GCAGAGACGCAAACG 2706
Query 2621 TGTGAATATCA 2631
||| |||||||
Sbjct 2707 TGTAAATATCA 2717
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134296906411
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5