BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473137 Length=2118 Score E Sequences producing significant alignments: (Bits) Value AT1G29200.2 | Symbols: | O-fucosyltransferase family protein |... 3314 0.0 > AT1G29200.2 | Symbols: | O-fucosyltransferase family protein | chr1:10207822-10210622 FORWARD LENGTH=2150 Length=2150 Score = 3314 bits (1794), Expect = 0.0 Identities = 2039/2152 (95%), Gaps = 37/2152 (2%) Strand=Plus/Plus Query 1 ACTTAGAATTAATTTGTTCTGTCTGGATTTCTCCACACTTTTTTCACCAATTGTCATATT 60 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1 ACTTAGAATTAATTTGTTCTGTCGGGATTCCTCCACACTTTTTTCACCAATTGTCATATT 60 Query 61 TTATTGTTGAATATTTTGGTTCCATCAATTTCTTAATTGCTTCCCTTACATCGAGAGAGT 120 ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| Sbjct 61 TTATTGTTGAATATTTTGGTTCCATCAATCTCTTAATTGCTTGCCATACATCGAGAGAG- 119 Query 121 TTCTTGATTAATTTTGCATTTCGT-AATAGTTTATGAGCT-------------GA--ATT 164 ||||||||| |||||||||||| | ||||||||||||||| || ||| Sbjct 120 TTCTTGATTCATTTTGCATTTCCTAAATAGTTTATGAGCTGAGAGAAGAGACAGATCATT 179 Query 165 AATGGGGAAACAAGGATCACCGAGAAGTCCTCGACCCGAAAATATAGATAAAGAAGAGAA 224 |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 180 AATGGGGAAACAGGGATCACCGAGAAGTCCTCGACCTGAAACCATAGATAAAGAAGAGAA 239 Query 225 AGTTGGGAGGAGAAGTTTGGATTCTTTATCTGGAAATGATCTCTTACTCGGTAGAAAAAT 284 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 240 ATTTGGGAGGAGAAGTTTGGATTCTTTATCTGGTAATGATCTCTTACTCGGTAGAAGAAT 299 Query 285 ATATGGAAGTGAAGTTTCCAAGGCTCAAGGATCTAAGCATGATCAAAGCTGTGTTAGTAG 344 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 300 ATATGCAAGTGAAGTTTCCAAGGCTCAAGGATCTAAGCATGATCAAAGCAGTGGTAGTAG 359 Query 345 CAACAAGTTTTGGAAGAAGCAACAGTCATGGCTTCGTAGGAACTTCAAGTCGATAGTTTT 404 |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 360 CAACAAATTTTGGAAGAAGCAACATTCATGGCTTCGTAGGAACTTTAAGTCGATAGTTTT 419 Query 405 GATGATCTCAGTCACCGGTTTCATTTTCTGCATCGATTCAATCATGGTTTCGATCTTTCA 464 |||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||| Sbjct 420 GATGATCTCAGTCACCGGTTTCATTTTCTGTATGGATTCCATTATGGTTTCGATCTTTCA 479 Query 465 TTCTGATAGTAGCGCCATGGTTCAAGACATTTCAAGGTTGAGCAATATGACTTTGCATAA 524 ||| |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 480 TTCCGATAGTAGAGCCGTGGTGCAAGACATTTCAAGGTTGAGCAATATGACTTTGCATAA 539 Query 525 GAATGGAGCTCAAGATGCTTCACCAGTGCAAATGTATAGCCGTCTTCTAAACTTAGCTTC 584 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 540 GAATGGAGCAGTAGATGCTTCACCAGTTCAAATGTATAGCCGTCTTCTAAACTTAGCTTC 599 Query 585 GGATTCTCTTGCAAAGAATGAATTCAAACCCGATACACCAAATTTCCAAGAGGAAAGATC 644 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 600 GGATTCTCTTGCAAAGAATGAATTCAAACCCGATACACCAAACTTCCGGGAGGAAAGATC 659 Query 645 TTCAAAGTCACCGCAGTGGAAGCCTTGTGCAGATAATAACAAAGCAGCTGTGGCATTAGA 704 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TTCAAAGTCATCACAGTGGAAGCCTTGTGCAGATAATAACAAAGCAGCTGTGGCATTAGA 719 Query 705 GAGGTATAGAGAATTAAGCAATGGTTACATAATGGTTAGTGCAAATGGTGGCCTTAATCA 764 ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 720 GAGGTCTAGAGAATTAAGCAATGGTTACATCATGGTTAGTGCAAATGGAGGCCTTAATCA 779 Query 765 ACAGCGTGTGGCTATCTGTAACGCTGTTGCGGTTGCTGCTCTGCTCAACGCGACTCTAGT 824 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 ACAGCGCGTGGCTATCTGTAACGCTGTTGCGGTTGCTGCTCTGCTCAACGCGACTCTAGT 839 Query 825 TCTTCCTCGGTTTCTTTACAGCAATGTATGGAAAGATCCTAGCCAATTTGGTGATATATA 884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 TCTTCCTCGGTTTCTTTACAGCAATGTATGGAAAGATCCTAGCCAATTTGGTGATATATA 899 Query 885 CCAAGAGGATCGTTTTATAGAGTATCTGAAAGATGAGGTGCATATAGTGAAGGATCTTCC 944 ||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||| Sbjct 900 CCAAGAGGATCATTTTATCGAGTATCTGAAAGATGAGGTGAATATAGTGAAGAATCTTCC 959 Query 945 TCAACATCTAAAATCTACTGATAACAAGAATCTTAGCTTGGTTACTGATACAGAGCTTGT 1004 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 960 TCAACATCTAAAATCTACTGATAACAAGAATCTCAGCTTGGTTACTGATACGGAGCTTGT 1019 Query 1005 AAAAGAGGCAA-AGCCAGTCGATTACATCGAACGTGTTCTTCCTTTGTTAAAGAAGTATG 1063 ||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1020 AAAAGAGGCAACA-CCAGTCGATTACATCGAACATGTTCTTCCTTTGTTAAAGAAGTATG 1078 Query 1064 GAATGGTTCATCTTTTTGGATACGGGAATCGCCTCGGATTTGATCCATTGCCTTTTGATG 1123 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct 1079 GAATGGTTCATCTTTTCGGATACGGGAATCGCCTCGGGTTTGATCCATTGCCTTTTGACG 1138 Query 1124 TTCAGAGATTACGATGTAAATGCAACTTTCACGCGCTGAAATTCGTGCCAAAGATTCAAG 1183 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 1139 TTCAGAGATTACGATGTAAATGCAACTTTCACGCGCTGAAATTCGCGCCCAAGATTCAAG 1198 Query 1184 AAGCAGGATCTCTATTGGTGAAACGGATAAGAAGATTCAAAACATCGCGTAGCATATTGG 1243 |||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1199 AAGCGGGATCTCTGTTGGTGAAACGGATAAGAAGATTCAAAACATCGCGTAGCAGATTGG 1258 Query 1244 AAGAAGCATTGCTTGGTGAATCCATGGTGAAAAATACTGTTAAAGGAGAAGAAGAACCGT 1303 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1259 AAGAAGCATTACTTGGTGAATCCATGGTGAAAAGTACTGTTAAAGGAGAAGAAGAACCGT 1318 Query 1304 TGAAGTATCTTGCTTTGCATCTAAGGTTTGAAGAAGACATGGTTGCTTATTCTCTATGCA 1363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 TGAAGTATCTTGCTTTGCATCTAAGGTTTGAAGAAGACATGGTTGCTTATTCTCTATGCG 1378 Query 1364 ATTTTGGAGGAGGAGAAACTGAGCGTAAAGAGCTTCAAGAGTACCGTGAAGATCATTTCC 1423 ||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||| Sbjct 1379 ATTTTGGAGGAGGAGAAGCCGAGCGCAAAGAGCTTCAAGCTTACCGTGAAGATCATTTCC 1438 Query 1424 CTCTTCTACTCAAACGTTTGAAGAAATCAAAGTCAGTGTCCCCAGAAGAGTTAAGAAAAA 1483 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1439 CTCTTCTACTCAAACGTTTGAAGAAATCAAAGCCAGTGTCCCCAGAAGAGTTAAGAAAAA 1498 Query 1484 CGGGCAAGTGTCCACTAACACCAGAGGAAGCAACTCTGGTTCTTGCTGGTCTTGGATTCA 1543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 CGGGCAAGTGTCCACTAACACCAGAGGAAGCAACTCTGGTTCTTGCTGGTCTTGGATTCA 1558 Query 1544 AGAGAAAAACATATATTTACTTAGCTGGATCTCAAATCTATGGAGGCTCTTCTCGTATGC 1603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 AGAGAAAAACATATATTTACTTAGCTGGATCTCAAATCTATGGAGGCTCTTCTCGTATGC 1618 Query 1604 TTTCTTTAACAAGACTGTACCCGAATATCGCGACCAAAGAAACTCTCCTTACACCTCAAG 1663 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1619 TTCCTTTAACAAGACTGTACCCGAATATCGCGACCAAAGAAACTCTCCTTACACCTCAAG 1678 Query 1664 AACTTGCGCCATTCAAGAACTTCTCTTCTCAGCTAGCTGCACTAGATTTCATAGCTTGTA 1723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1679 AACTTGCGCCATTCAAGAACTTCTCTTCTCAGCTAGCTGCACTAGATTTCATAGCTTGTA 1738 Query 1724 TAGCATCAGATGTGTTTGCAATGACTGATTCTGGGAGTCAACTATCGTCCTTAGTGTCTG 1783 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1739 TAGCATCAGATGTCTTTGCAATGACTGATTCTGGGAGTCAACTATCATCCTTAGTGTCTG 1798 Query 1784 GATTTAGAACCTACTACGGAAACGGTCAGGCACCAACATTGAGACCTAACAAGAAGAGGC 1843 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 GATTTAGAAACTACTACGGAAACGGTCAGGCACCAACATTGAGACCTAACAAGAAGAGGC 1858 Query 1844 TTGCAGCAATCTTATCAGACAGTGAAACAATAAAGTGGAAGATTTTTGAAGATCGCGTGA 1903 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1859 TTGCAGCAATCTTATCAGACAGTGAAACAATAAAGTGGAAGATTTTTGAAGATCGTGTGA 1918 Query 1904 GAAAAATGGTAGAGGAAGGCCAAAAGCTTCGTACTAGGCCTTATGGACGCAGCATTTATA 1963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1919 GAAAAATGGTAGAGGAAGGCCAAAAGCTTCGTACTAGGCCTTATGGACGCAGCATTTATA 1978 Query 1964 GACAGCCGAGATGTCCTGAGTGTATGTGTAAATTTTGATCCTTGAAAGTACAACAATAGT 2023 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1979 GACAACCGAGATGTCCTGAGTGTATGTGTAAATTTTGATCCTTGAAAGTAAAACAATAGT 2038 Query 2024 GTCTGCTCTGAAATTTTT-A--A------A--A-AA-----GAATGAATGCACTGTATAT 2066 ||||| |||||||||||| | | | | || ||||||| | ||||||||| Sbjct 2039 GTCTGGTCTGAAATTTTTGATTACCCGTTAGTACAAAAAAAGAATGAAGGTACTGTATAT 2098 Query 2067 CATTGACTTTTAAGTTTGTACCCGTTATGAAACATTGAACTAGAACCTCTTT 2118 |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2099 CATTGA-TTTTAAGTTTGTACTCGTTATGAAACATTGAACTAGAACCTCTTT 2149 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105019540140 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5