BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473140
Length=1723
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29300.1 | Symbols: UNE1 | Plant protein of unknown function... 2495 0.0
AT2G32130.1 | Symbols: | Plant protein of unknown function (DU... 477 1e-133
> AT1G29300.1 | Symbols: UNE1 | Plant protein of unknown function
(DUF641) | chr1:10247780-10249594 REVERSE LENGTH=1815
Length=1815
Score = 2495 bits (1351), Expect = 0.0
Identities = 1581/1687 (94%), Gaps = 36/1687 (2%)
Strand=Plus/Plus
Query 1 GCTGTATCAGACTCA-C--AAAAACTTCTCCTAATTGTCAG----aaaaaaaaaaa--aC 51
||||| ||||||||| | |||||||||||| ||||||| ||||||||||| ||
Sbjct 1 GCTGTTTCAGACTCACCAAAAAAACTTCTCC---TTGTCAGAAAAAAAAAAAAAAACTAC 57
Query 52 TGAATCTCTCTGttttttttttCTTTCACAAAATCTCAATTTCAATGGAGACATTGAAGA 111
||||||||||||||||||||| ||||||| || | || |||||||||||||||||||
Sbjct 58 TGAATCTCTCTGTTTTTTTTTCCTTTCAC--AA---C-ATCTCAATGGAGACATTGAAGA 111
Query 112 AGAATCCGTCAGTGAGAAGAAAAAGCAAGTTAGCGAGAACATTCCAGAAAGTATGTAACC 171
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 AGAATCCATCAGTGAGAAGAAAAAGCAAGTTAGCGAGAACATTCCAGAAAGTATGTAACC 171
Query 172 TAAGAACAACGTCGACGAAGGTCTCCTCCAACAACGGAATCGGAATCTGTATGTTAAAGT 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 TAAGAACAACGTCGACGAAGGTCTCCTCCAACAACGGAATCGGAATCTGTATGTTAAAGT 231
Query 232 CACAGAATCCAAATTTCAACGATGAAGACGACGACGGAGACTCTGTTTTCGATTTGAAGA 291
| || |||||||||||| |||| |||||||||||||||||||||||||||||||| ||||
Sbjct 232 CCCAAAATCCAAATTTCGACGACGAAGACGACGACGGAGACTCTGTTTTCGATTTAAAGA 291
Query 292 GTACTTCCAGTAGCAGAAGCG-AGGAGATCAAAGTCCGAGAGCGTCGTAGAGCTGTTTTA 350
||||||||||||||||||||| || |||||||||| ||||||||| |||||||||||||
Sbjct 292 GTACTTCCAGTAGCAGAAGCGGAG-AGATCAAAGTGCGAGAGCGTAATAGAGCTGTTTTA 350
Query 351 GAAGCTGTGGTTGCGAAGATCTTCGCTAGTACGACCTCCATTAAAGCTGCTTACGCTGAG 410
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 351 CAAGCTGTGGTTGCGAAGATCTTCGCTAGTACGACTTCCATTAAAGCTGCTTACGCAGAG 410
Query 411 CTTCAGATGGCGCAACGTCCGTACGATAACGACGCTATACAAGCGGCGGATACGGCGGTG 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 CTTCAGATGGCGCAACGTCCGTACGATAACGACGCTATACAAGCGGCGGATACGGCGGTG 470
Query 471 GTCGAAGAGCTTAGAGCTTTATCGGAGCTTAAACGGAGTTTTCTTAGGAAGGAACTGAAT 530
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 471 GTCGAAGAGCTTAGAGCTTTATCGGAGCTTAAACGGAGTTTTCTCAGGAAGGAATTGAAT 530
Query 531 CTGTCTCCGCAAGTTGCGATTATGTTAGCTGAGATCCAGGAGCAACAGAGTTTGATGAGG 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 CTGTCTCCGCAAGTTGCGATTATGTTAGCTGAGATCCAGGAGCAACAGAGTTTGATGAGG 590
Query 591 ACTTACGAAATCACGATTAAGAAACTCGAGTTTGAAGTTACGGAGAAGAAATTGAAGATC 650
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 591 ACTTATGAAATCACGATTAAGAAACTCGAGTTTGAAGTTACGGAGAAGCAATTGAAGATC 650
Query 651 GATGAATTGAAGATGAGTCTTGATGAGAATTTGGT-GATGAATAAATCGTTGGAGAAGAA 709
|||||||||||||||||| |||| |||| |||||| | ||||||||||||||||||||||
Sbjct 651 GATGAATTGAAGATGAGTTTTGAAGAGAGTTTGGTTG-TGAATAAATCGTTGGAGAAGAA 709
Query 710 ACTCACAGCGAGTGGATCGATTTCTGCGTTTGATAATATTCAAATTTCGAA-TTTGAATT 768
|||| |||||||||||||| | |||| ||||||||||||| ||||| |||| ||||||||
Sbjct 710 ACTCTCAGCGAGTGGATCGGTCTCTGTGTTTGATAATATTGAAATT-CGAAATTTGAATT 768
Query 769 TGAGTCAGTTT-GTTCAGGTTTTAGGTTTTACGATGAGATCTGTTAGAAGCTTTGTGAAA 827
||||| ||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct 769 TGAGT-AGTTTTGTTCAGGTTTTAGGTTTTACGTTGAGATCTGTGAGAAGCTTCGTGAAA 827
Query 828 TTGATTGTGAAGGAGATGGAATCAGCGAGCTGGGATCTAGACGCCGCCGCTTCCGCCGCC 887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 TTGATTGTGAAGGAGATGGAATCAGCGAGCTGGGATCTAGACGCCGCCGCTTCCGCCGCT 887
Query 888 GTTTCGGTGAACGTTAAAAACGCTTCCACCGTTTTCGCGAGACCGAGTCATCGTTGTTTC 947
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 888 GTTTCGGTGAACGTTAAAAACGCTTCCACCGTTTTCGCGAGGCCGAGTCACCGTTGTTTC 947
Query 948 GCGTTTGAATCGTTTGTTTGTGGGAAAATGTTTGAGAGTTTCGAATCTCCTGATTTCTCG 1007
||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||
Sbjct 948 GCGTTTGAATCGTTTGTTTGTGGGAAAATGTTTGAGAATTTTGGAGCTCCTGATTTCTCG 1007
Query 1008 AGTCGTGAGGAATTTGAAAACGT-GAGATCCGTTGACCCGATTCAGTACTTGACCCGGAA 1066
|| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1008 AGACGTGAGGAATTCGAAAA-GTTGAGATCCGTTGACCCGATTCAGTACTTGACCCGGAA 1066
Query 1067 CCCGGGTTCGTCTTTTGCGAGTTTCGTGGTTCATAAGTACTTGAGCGTTGTACACGCGAA 1126
|||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct 1067 CCCGGGTTCGTCTTTTGCCAGGTTCGTGGTTCATAAGTACTTGAGCGTTGTACATGCGAA 1126
Query 1127 GATGGAGTGTTCTTTCTTCGGGAACTTGAACCAGAGGAAACTGGTTAACTCGGGTGGGTT 1186
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1127 GATGGAGTGTTCTTTCTTCGGGAACTTGAACCAGAGGAAGCTGGTTAACTCGGGTGGGTT 1186
Query 1187 TCCGAATTCGGGTTTTTTCGCAACGTTTTGTGAAATGGCTAAACGGATCTGGCTTCTT-C 1245
|||| | |||||||| ||||| ||||||||||||||||| ||||||||||||||| || |
Sbjct 1187 TCCGGACTCGGGTTTCTTCGCGACGTTTTGTGAAATGGCAAAACGGATCTGGCTT-TTAC 1245
Query 1246 ACTGCTTAGCGTTTTCTTTAAGTGAAAACGTCACGGTGTTTCAGCTCAAAAGAGGTTGTA 1305
|||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||
Sbjct 1246 ACTGCTTAGCGTTTTCATTAAGCGGAAACGTCACGGTGTTTCAGCTCAAACGAGGTTGTA 1305
Query 1306 GATTCTCTCAAGTGTATATGGAGAGTGTGAAATCAGGCGATGAGTCAATCTTCTCCGGCG 1365
||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||| |
Sbjct 1306 GATTCTCTCAAGTATATATGGAGAGTGTGAAATCCGGCGATGAGTCATTATTCTCCGGTG 1365
Query 1366 ATAATTCAGATATTCGGGTCGGGTTCACGGTTGTTCCCGGGTTTAAAATCGGTGAAAATG 1425
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1366 ATAATTCAGATATTCGGGTCGGGTTCACGGTTGTTCCCGGGTTTAAAATCGGCGAGAATG 1425
Query 1426 TGATACAAAGCCAGGTTTACTTGTCTCCGGTTAACGGTTTTACTTCATGAATAG-CCAAA 1484
||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 1426 TGATACAAAGCCAGGTTTACTTGACTCCGGTTAACGGTTTTACTTCATGAATAGGCCAA- 1484
Query 1485 TCAAAAGGAAAACGCGGTGG-TTGTGTTCACGCGCCGGGGAA-AATAAA-AGAGGTGGCG 1541
|| |||| | |||||||||| ||||||||||||||||||||| || ||| ||||| ||||
Sbjct 1485 TCCAAAG-AGAACGCGGTGGGTTGTGTTCACGCGCCGGGGAAGAAAAAAGAGAGGCGGCG 1543
Query 1542 CGTGGAAAGGAAATGGTGGGGACATGATTCCTTGGGGGCAGCAAGACTGGCAAGTGGGTC 1601
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1544 CGTGAAAAGGAAATGGTGGGGACATGATTCCTTGGGGGCAGCAAGACTGGCAAGTGGGAC 1603
Query 1602 ATGTTTTGAGAATGTGACGGAGACAGAAAATGGCGCGAGGGACAATCATCATGAGAAAAT 1661
||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1604 ATGTTTTAAGAATGTGACGGAGACAGAAAATGGCGCGAGGGACAATCATTATGAAAAAAC 1663
Query 1662 AGTTTAG 1668
|||||||
Sbjct 1664 AGTTTAG 1670
> AT2G32130.1 | Symbols: | Plant protein of unknown function (DUF641)
| chr2:13654886-13655525 REVERSE LENGTH=640
Length=640
Score = 477 bits (258), Expect = 1e-133
Identities = 336/374 (90%), Gaps = 3/374 (1%)
Strand=Plus/Plus
Query 346 TTTTAGAAGCTGTGGTTGCGAAGATCTTCGCTAGTACGACCTCCATTAAAGCTGCTTACG 405
||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 152 TTTTA-AAGCGGTGGTTGCGAAGATCTTCGCTAGTACAACTTCCATTAAAGCTGCTTACG 210
Query 406 CTGAGCTTCAGATGGCGCAACGTCCGTACGATAACGACGCTATACAAGCGGCGGATACGG 465
| |||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 211 CAGAGCTTCAGAGGGCTCAAAGTCCGTACGATAGCGACGCTATACAAGCGGCGGATACGG 270
Query 466 CGGTGGTCGAA-GAGCTTAGAGCTTTATCGGAGCTTAAACGGAGTTTTCTTAGGAAGGAA 524
||| || || || || | | |||||||||||||||||||||||||| | |||||||||
Sbjct 271 TGGTAGT-TAATGAACTAAAAACTTTATCGGAGCTTAAACGGAGTTTTATGAGGAAGGAA 329
Query 525 CTGAATCTGTCTCCGCAAGTTGCGATTATGTTAGCTGAGATCCAGGAGCAACAGAGTTTG 584
||||||| || || |||||||||||||||||||||||||||| || || |||||||||
Sbjct 330 TTGAATCTTTCACCAAAAGTTGCGATTATGTTAGCTGAGATCCATGAACAGCAGAGTTTG 389
Query 585 ATGAGGACTTACGAAATCACGATTAAGAAACTCGAGTTTGAAGTTACGGAGAAGAAATTG 644
||||||||||| |||||| |||| |||| ||| || ||||||||||||||||||||| ||
Sbjct 390 ATGAGGACTTATGAAATCGCGATGAAGAGACTTGAATTTGAAGTTACGGAGAAGAAAGTG 449
Query 645 AAGATCGATGAATTGAAGATGAGTCTTGATGAGAATTTGGTGATGAATAAATCGTTGGAG 704
||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 450 AAGATCGATGAGTTGAAGATGAATCTTGAAGAGAATTTGGTGATGAATAAATCGTTGGAG 509
Query 705 AAGAAACTCACAGC 718
||||||||||||||
Sbjct 510 AAGAAACTCACAGC 523
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85190324865
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5