BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473176
Length=2727
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29740.1 | Symbols: | Leucine-rich repeat transmembrane pro... 2379 0.0
AT1G29730.1 | Symbols: | Leucine-rich repeat transmembrane pro... 1147 0.0
> AT1G29740.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:10407379-10412997 REVERSE LENGTH=3237
Length=3237
Score = 2379 bits (1288), Expect = 0.0
Identities = 1497/1599 (94%), Gaps = 10/1599 (1%)
Strand=Plus/Plus
Query 1134 AACCAGACTTCTTCCGTGTTCCGCCATAGACAAATGTCAAAATTATAGTAGGTCGTTGCA 1193
||||||||||||||||||||| |||||| || ||| |||||||||| ||||||||||||
Sbjct 1179 AACCAGACTTCTTCCGTGTTCTGCCATAAACCTATGCCAAAATTATAATAGGTCGTTGCA 1238
Query 1194 TATAAACTGCGGGGGACCTGATGTAACCATCGAAAACTCTAGAGGAAGGTTTCTATATGA 1253
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 TATAAACTGTGGGGGACCTGATGTAACCATCGAAAACTCTAGAGGAAGGTTTCTATATGA 1298
Query 1254 GGGTGATAACTATGGACTTATCGGTTCAGCTACGAACTATTATGGGAAAAGTTGGGGATT 1313
|||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct 1299 GGGTGATAACTATGGACTTACCGGATCAGCTACGAACTATTATGGGAAAAATTGGGGATT 1358
Query 1314 CAGCAATACTGGTGACTTTATGGATGATGCAATAACAGAAGATACATACACAGTTTCATC 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 CAGCAATACTGGTGACTTTATGGATGATGCAATAACAGAAGATACATACACAGTTTCATC 1418
Query 1374 AGAATCTGCAGTCTCTGCAAAATATCCTGACCTTTACCAGAATGCTCGGCGTTCTCCTCT 1433
|||||||||||| || || |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1419 AGAATCTGCAGTTTCAGCCAAATATCCAGACCTTTACCAGAATGCTCGGCGTTCTCCCCT 1478
Query 1434 GAATTTGGCTTACTTCG-CATTCTGTTTTAAAAATGGAAGCTACAATGTGAAACTCCATT 1492
|| |||||||||||| | || |||||||| ||||||||||||||||||||||||||||||
Sbjct 1479 GAGTTTGGCTTACTTTGCCA-TCTGTTTTGAAAATGGAAGCTACAATGTGAAACTCCATT 1537
Query 1493 TTGCAGAGATTCAGTTCTCAGATGAGGAACCATTTGCTAGACTAGCAAAACGGTTTTTTA 1552
||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct 1538 TTGCAGAGATTCAGTTCTCAGATGAGGAACCTTTTTCTAGACTAGCAAAACGGGTTTTTA 1597
Query 1553 ATATTTACGTTCAGGGAAAGTTGATTTGGGAGGATTTCAGCATCAGGGATGAGGCTAATG 1612
| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1598 ACATTTACGTTCAGGGGAAGTTGATTTGGGAGGATTTTAGCATCAGGGAGGAGGCTAATG 1657
Query 1613 GAACTCACAAGGAAGTTATTAAAGAAGTGAACACGACCGTGACTGACAACACTTTAGAGA 1672
|||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct 1658 GAACTCACAAAGAAGTTATAAAAGAAGTGAACACAACCGTGACTGATAACACTTTAGAGA 1717
Query 1673 TACGGTTGTACTGGGCAGGGAAAGGCACAACAATCATTCCTAAAAGAGGGAACTATGGCT 1732
|||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1718 TACGGTTGTACTGGGCGGGGAAAGGCACGACGATCATTCCTAAAAGAGGGAACTATGGCT 1777
Query 1733 CTCTTATTTCAGCAATCTCAGTCTGTCCCAGTTCGGAATCTGAATGTGGCGTTCCGGTGC 1792
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1778 CTCTTATCTCTGCAATCTCAGTCTGTCCCAGTTCAGAATCTGAATGTGGCGTTCCGGTGC 1837
Query 1793 CAATTCATCCAGTCACAAAACAACAAAACAAACCAAGAAAATATCCTCTCATTCTCGGCA 1852
||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct 1838 AAATTCATCCAGTCACAAAACAACAACACAAACAAAGAAAATATCATCTCATTCTCGGCA 1897
Query 1853 TAGCAGCCTTAATACTCTCTCTTGCTTTCTTGATTTTGGGCGCCCTCTATTGGAAAATAT 1912
|||||||||||||| |||||||| |||||||||| |||||||| | ||||||| |||||
Sbjct 1898 TAGCAGCCTTAATAGTCTCTCTTTCTTTCTTGATATTGGGCGCTTTATATTGGAGAATAT 1957
Query 1913 GTGTTAGAAATGCAGATGCAGGA-AAAAGAGGTTCCTTCAGTTTGAGGCAACTAAAAGTT 1971
| ||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct 1958 GCGTTAGCAATGCAGATGGA-GAGAAAAGAGGTTCCTTCAGTTTGAGGCAACTAAAAGTT 2016
Query 1972 GCGACTGATGATTTTAATCCGTCAAATAAGATTGGAGAAGGCGGCTTCGGATCTGTTTAT 2031
|| || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 2017 GCAACAGATGATTTTAATCCGTTAAACAAGATTGGAGAAGGCGGCTTCGGATCTGTTTAT 2076
Query 2032 AAGGGGAGATTACCAGATGGAACATTGATTGCGGTAAAGAAGTTATCTTCCAAATCCCAT 2091
|||||| | |||||| ||||||| ||||||||||| |||||| ||||||||||||| |
Sbjct 2077 AAGGGGCGCTTACCAAATGGAACGTTGATTGCGGTCAAGAAGCTATCTTCCAAATCATGT 2136
Query 2092 CAAGGTAACAAAGAGTTCGTAAACGAGATAGGTATGATCGCTTGCCTGCAGCACCCGAAC 2151
||||| || |||||||| |||||||||| ||||| |||||||| ||||||||||||||
Sbjct 2137 CAAGGCAATAAAGAGTTTATAAACGAGATCGGTATAATCGCTTGTCTGCAGCACCCGAAT 2196
Query 2152 CTTGTAAAACTTTATGGATGCTGTGTTGaaaaaaaCCAGCTGCTTCTTGTCTATGAGTAC 2211
||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 2197 CTTGTGAAGCTTTATGGATGCTGTGTTGAGAAAACCCAGCTGCTTCTTGTCTATGAGTAC 2256
Query 2212 TTGGAGAACAATTGTCTTGCCGATGCATTATTCGGAAGAAGTGGTCTGAAACTAGACTGG 2271
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 2257 TTGGAGAACAATTGTCTTGCCGATGCATTATTTGGAAGAAGCGGTCTGAAACTAGACTGG 2316
Query 2272 AGAACAAGACACAAAATATGCTTGGGAATAGCAAGAGGGCTTG-CTTTCCTTCATGAAGA 2330
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 2317 AGAACAAGACACAAAATATGCTTGGGAATAGCAAGAGGGCTTGCCTTT-CTTCATGAAGA 2375
Query 2331 TTCAGCGGTTAAGATCATCCATAGAGACATCAAAGGGACAAATATACTTCTAGACAAGGA 2390
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct 2376 TTCAGCGGTTAAGATCATTCACAGAGACATCAAAGGAACAAATATACTGCTAGACAAGGA 2435
Query 2391 CT-TGAACTCAAAGATCTCAGATTTCGGGTTGGCCAGGCTCCATGAAGACGATCGGAGTC 2449
| ||||||||||||| ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct 2436 -TCTGAACTCAAAGATATCAGATTTCGGATTGGCCAGGCTACACGAAGACGATCAGAGTC 2494
Query 2450 ACATTACCACCAGAGTTGCAGGAACAATAGGATATATGGCTCCTGAATATGCAATGAGGG 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2495 ACATTACCACCAGAGTTGCAGGAACAATAGGATATATGGCTCCTGAATATGCAATGAGGG 2554
Query 2510 GTCACCTAACAGAAAAGGCAGATGTTTACAGCTTCGGTGTAGTAGCAATGGAGATCGTTA 2569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2555 GTCACCTAACAGAAAAGGCAGATGTTTACAGCTTCGGTGTAGTAGCAATGGAGATCGTTA 2614
Query 2570 GCGGAAAGAGCAACGCAAATTACACGCCAGATAGCGAATGTTGCGTTGGCCTTCTCGATT 2629
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2615 GCGGAAAGAGCAACGCAAATTACACGCCAGATAACGAATGTTGCGTTGGCCTTCTCGATT 2674
Query 2630 GGGCATTTGTACTACAAAAGAAAGGGGCTTTTGCA-GAGATTCTTGATCCGAAGCTTGAA 2688
||||||||||||||||||||||||| || |||| | |||||||| |||||||||||||||
Sbjct 2675 GGGCATTTGTACTACAAAAGAAAGGAGCATTTG-ATGAGATTCTGGATCCGAAGCTTGAA 2733
Query 2689 GGAGTGTTCAATGTGATGGAAGCAGAGAGAATGATAAAG 2727
|||||||| |||||||||| ||||||||||||||||||
Sbjct 2734 GGAGTGTTTGATGTGATGGAGGCAGAGAGAATGATAAAG 2772
Score = 1779 bits (963), Expect = 0.0
Identities = 1081/1138 (95%), Gaps = 7/1138 (1%)
Strand=Plus/Plus
Query 1 ATGTCTGTAGCTTACAAGCTCATGATCATGTCGCAAAGCCGCCTTTTTAGCTCTGTACTC 60
||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1 ATGTCTGCAGCTTACAAGCTCATGATCATGTCGCGAAGCCGCCTTTTTAGCTCTCTACTC 60
Query 61 TCTGTTCTTACTCTTATCTACTTGGTCTGTAC--T-GTATCTGCTTCTCCTTCTCTGCAC 117
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 61 TCTGTTCTTACTCTTATCTACTTGGTCTGTACAGTATTATCTGCTTCTCCTTCTCTGCAC 120
Query 118 CCAGATGAAGTGGAAGCGCTTAAAGATATTGCATTGACACTTGGTGTGAAACACTTGAAC 177
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 121 CCAGATGAAGTGGAAGCGCTTAAGGATATTGCATTGACACTCGGTGTGAAACACTTGAAC 180
Query 178 CTAAGTGAAGATCCGTGTCTCACAAAGACTCTGGTTATAACTCAAGATGTTCTCAAGGAA 237
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTAAGTGAAGATCCATGTCTCACAAAGACTCTGGTTATAACTCAAGATGTTCTCAAGGAA 240
Query 238 GGACAAAACAGCACAATCAAATGTGACTGTCGA-TTCAATAACAACAACACTTGTCATAT 296
||||||||||||||||||| ||||||||||| | ||||| |||||||| |||||||||||
Sbjct 241 GGACAAAACAGCACAATCAGATGTGACTGTC-ATTTCAACAACAACAATACTTGTCATAT 299
Query 297 TACACACTTTGTCCTTAAGACATTCAGTCTTCCCGGTAGACTTCCAACAGAATTTTCGAA 356
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 300 TACACACTTTGTCCTTAAGACATTCAGTCTTCCTGGTAGACTTCCACCAGAATTTTCGAA 359
Query 357 GCTTCGGTATCTTGAATTTATTGACTTGTGCCGTAATTATCTTTATGGCTCAATTCCTAT 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GCTTCGGTATCTTGAATTTATTGACTTGTGCCGTAATTATCTTTATGGCTCAATTCCTAT 419
Query 417 GGAATGGGCCTCACTGCCTTACCTAAAATCTATCTCTGTTTGCGCGAATCGCTTATCAGG 476
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 420 GGAATGGGCTTCACTGCCTTACCTAAAATCTATCTCTGTTTGCGCGAATCGCTTAACAGG 479
Query 477 AGACATTCCAAAGGGATTAGGGAAGTTTATTAACCTCACTCAATTAGTTCTTGAAGCCAA 536
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 480 AGACATTCCAAAGGGATTAGGGAAGTTTATTAACCTCACTCAATTAGGTCTTGAAGCCAA 539
Query 537 TCAATTCTCTGGAACAATCCCAAAGGAACTAGGGAACTTGGTTAATCTAGAAGGATTAGC 596
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TCAGTTCTCTGGAACTATCCCAAAGGAACTAGGGAACTTGGTTAATCTAGAAGGATTAGC 599
Query 597 ACTTTCTTCCAACGAACTAGTTGGAGGTGTACCCAAGACATTAGCAAGACTAAAAAATCT 656
| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 600 ATTTTCTTCTAACCAACTAGTTGGAGGTGTACCCAAGACATTAGCAAGACTAAAGAAGCT 659
Query 657 GACTAATCTACGATTCAGCGACAATCGCCTTAATGGATCCATCCCTGAGTTTATCGGGAA 716
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 660 GACTAATCTACGATTCAGCGATAATCGCCTTAATGGATCCATCCCTGAGTTTATAGGGAA 719
Query 717 CTTATCAAAACTTCAAAGATTAGAGCTTTACGCGAGTGGCCTAACCGAACCTATTCCAGA 776
|||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||| |
Sbjct 720 CTTATCAAAACTTCAAAGATTAGAACTTTACGCGAGTGGCTTAAAAGACCCTATTCCATA 779
Query 777 GTCCATATTTCGTCTAGAGAATTTAATTGACCTGAGGATCAGCGACACAACTGCAGCATT 836
||||||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||
Sbjct 780 CTCCATATTTCGTCTAGAGAATCTGATTGACCTGAGAATCAGCGACACAGCTGCAGGATT 839
Query 837 GGGACTAGTTCCTCTTATAACTAGCAAGAGCCTGAAATTTTTGGTTCTAAGAAACATGAA 896
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 GGGACAAGTTCCTCTTATAACTAGCAAGAGCCTGAAATTTTTGGTTCTAAGAAACATGAA 899
Query 897 CTTAAGAGGACCAATCCCAACCAGTCTCTGGGATCTTCCCAATCTCATGACGCTCGATCT 956
||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 900 CTTAACAGGACCAATCCCAACCAGTCTTTGGGATCTTCCCAATCTCATGACTCTCGATCT 959
Query 957 TTCTTTTAATAGACTGACTGGAGA-GATACCAGCAGATGCAAGTGCGCCAAAATATACAT 1015
|||||| ||||||||||| ||||| | |||||||||||||||| ||||||||||||||||
Sbjct 960 TTCTTTCAATAGACTGACAGGAGAAG-TACCAGCAGATGCAAGCGCGCCAAAATATACAT 1018
Query 1016 ATTTGGCTGGAAATATGTTGTCAGGAAAAGTTGAATCAGGACCTTTCCTTACAGCAAGCA 1075
||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1019 ATTTGGCAGGAAACATGTTGTCAGGAAAAGTTGAGTCAGGACCTTTCCTTACTGCAAGCA 1078
Query 1076 CCAATATTGATCTTTCTTATAATAACTTTACATGGTCTCCAAGCTGCAAAGAGAGGAA 1133
||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1079 CCAATATTGATCTCTCTTATAATAACTTCACATGGTCTCAAAGCTGCAAAGAGAGGAA 1136
> AT1G29730.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:10400564-10405874 REVERSE LENGTH=3056
Length=3056
Score = 1147 bits (621), Expect = 0.0
Identities = 976/1147 (85%), Gaps = 25/1147 (2%)
Strand=Plus/Plus
Query 1 ATGTCTGTAGCTTACAAGCTCATGATCATGTCGCAAAGCCGCCTTTTTAGCTC-TGTA-- 57
||||||| ||||||||| |||||||| | |||| |||| ||||||||||||| | ||
Sbjct 1 ATGTCTGCAGCTTACAATCTCATGATTAAGTCGAAAAGTTGCCTTTTTAGCTCTTCTATT 60
Query 58 CTCTCTGTTCTTACTCTTATCTACTTGGTCTGTACTGTATCTGCTTCTCCTTCTCTGCAC 117
|||| |||| |||| ||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 61 CTCTTTGTTGTTACACTTATCTACTTATTATGTACTGTATCTGCTTCTCCTTCTCTGCAC 120
Query 118 CCAGATGAAGTGGAAGCGCTTAAAGATATTGCATTGACAC-TTGG-TGTGAAACACTTGA 175
|||||||||||||||||||| || ||||| || ||| || |||| |||||| |||||||
Sbjct 121 CCAGATGAAGTGGAAGCGCTGAAGGATAT--CACTGAAACATTGGGTGTGAAGCACTTGA 178
Query 176 ACCTAAGTGAAGATCCGTGTCTCACAAAGACTCTGGTTATAACTCAAGATGTTCTCAAGG 235
|||||||||||||||| ||||||||||||||||| || ||| |||||| |||||||||||
Sbjct 179 ACCTAAGTGAAGATCCATGTCTCACAAAGACTCTAGTGATATCTCAAGGTGTTCTCAAGG 238
Query 236 AAGGACAAAACAGCACAATCAAATGTGACTGTCGATT-CAATAACAACAACACTTGTCAT 294
||||||| ||||||||||||| ||||||||||| ||| ||||||| ||| ||||||||||
Sbjct 239 AAGGACAGAACAGCACAATCAGATGTGACTGTC-ATTTCAATAACTACAGCACTTGTCAT 297
Query 295 ATTACACACTTTGTCCTTAAGACATTCAGTCTTCCCGGTAGACTTCCAACAGAATT-T-T 352
|| | |||||||||||| ||| ||||| |||||| ||||||||||| || | | | |
Sbjct 298 ATCAAACACTTTGTCCTCCAGAAATTCAATCTTCCAGGTAGACTTCCTCCA-A-TGCTGT 355
Query 353 -CGAAGCTTCGGTATCTTGAATTTATTGACTTGTGCCGTAATTATCTTTATGGCTCAATT 411
| ||| ||||| ||||||||| |||||||| | | |||||| |||||||||||||||
Sbjct 356 AC-AAGTTTCGGCATCTTGAATCGATTGACTTATACAATAATTACCTTTATGGCTCAATT 414
Query 412 CCTATGGAATGGGCCTCACTGCCTTACCTAAAATCTATCTCTGTTTGCGCGAATCGCTTA 471
||||||||||||||||||||||||||||| |||||||||||||| || || || ||||||
Sbjct 415 CCTATGGAATGGGCCTCACTGCCTTACCTCAAATCTATCTCTGTCTGTGCAAACCGCTTA 474
Query 472 TCAGGAGACATTCC-AAAGGGATTAGGGAAGTTTATTAACCTCACTCAATTAGTTCTTGA 530
|||||||||||||| ||||| ||| |||||||||||||||||||| | |||||||||||
Sbjct 475 TCAGGAGACATTCCCAAAGG-ATTGGGGAAGTTTATTAACCTCACCCTTTTAGTTCTTGA 533
Query 531 AGCCAATCAATTCTCTGGAACAATCCCAAAGGAACTAGGGAACTTGGTTAATCTAGAAGG 590
||||||||| || || ||||| || || ||||||||||||||| | || |||||| ||||
Sbjct 534 AGCCAATCAGTTTTCGGGAACTATTCCTAAGGAACTAGGGAACCTAGTGAATCTACAAGG 593
Query 591 ATTAGCACTTTCTTCCAACGAACTAGTTGGAGGTGTACCCAAGACATTAGCAAGACTAAA 650
| ||| ||| ||||||||| |||| || ||||| | |||||||||||||||| |||||
Sbjct 594 ACTAGGACTCTCTTCCAACCAACTTGTCGGAGGCCTCCCCAAGACATTAGCAAAACTAAC 653
Query 651 AAATCTGACTAATCTACGATTCA-GCGACAATCGCCTTAATGGATCCATCCCTGAGTTTA 709
||| || |||||||| | ||| | | || |||||||| || ||||| || || |||||||
Sbjct 654 AAAGCTAACTAATCTCC-ATTTAAGTGATAATCGCCTGAACGGATCGATTCCAGAGTTTA 712
Query 710 TCGGGAACTTATCAAAACTTCAAAGATTAGAGCTTTACGCGAGTGGCCTAACCGAACCTA 769
| ||||| ||| ||||||||||||||||||| || || ||||||||||| | | |||||
Sbjct 713 TTGGGAAGTTACCAAAACTTCAAAGATTAGAACTCTATGCGAGTGGCCTTAGAGGACCTA 772
Query 770 TTCCAGAGTCCATATTTCGTCTAGAGAATTTAATTGACCTGAGGATCAGCGACACAACTG 829
||||||| ||||| |||| ||| |||||||| || ||| |||| ||||| ||||| ||
Sbjct 773 TTCCAGACTCCATTTTTCATCTGGAGAATTTGATCGACGTGAGAATCAGTGACACGGTTG 832
Query 830 CAGCATTGGGAC-TAGTTCCTCTTATAACTAGCAAGAGCCTGAAATTTTTGGTTCTAAGA 888
||| |||||||| | ||||||| |||||||||| ||||||||||| ||||||| | |||
Sbjct 833 CAGGATTGGGACAT-GTTCCTCAGATAACTAGCACGAGCCTGAAATATTTGGTTTTGAGA 891
Query 889 AACATGAACTTAAGAGGACCAATCCCAACCAGTCTCTGGGATCTTCCCAATCTCATGACG 948
||||| |||||| |||||||| ||||||||| |||||||||| |||| | | |||||
Sbjct 892 AACATAAACTTATCTGGACCAATTCCAACCAGTATCTGGGATCTGCCCAGTTTAATGACT 951
Query 949 CTCGATCTTTCTTTTAATAGACTGACTGGAGAGATACCAGCAGATGCAAGTGCGCCAAAA 1008
|| |||||||| |||||||| ||||||||||| ||||||||| |||||| ||| ||||||
Sbjct 952 CTGGATCTTTCCTTTAATAGGCTGACTGGAGAAATACCAGCATATGCAACTGCCCCAAAA 1011
Query 1009 TATACATATTTGGCTGGAAATATGTTGTCAGGAAAAGTTGAATCAGGACCTTTCCTTACA 1068
|| |||||||| |||||||| |||||||| ||||| |||||| ||||| ||||||||||
Sbjct 1012 TACACATATTTAGCTGGAAACATGTTGTCTGGAAAGGTTGAAACAGGAGCTTTCCTTACT 1071
Query 1069 GCAAGCACCAATATTGATCTTTCTTATAATAACTTT-ACATGGTCTCCAA-GCTGCAAAG 1126
|||||||| |||||||||||||| |||||||| ||| || |||||||||| | |||||||
Sbjct 1072 GCAAGCACAAATATTGATCTTTCCTATAATAA-TTTCACGTGGTCTCCAATG-TGCAAAG 1129
Query 1127 AGAGGAA 1133
|||||||
Sbjct 1130 AGAGGAA 1136
Score = 1090 bits (590), Expect = 0.0
Identities = 728/794 (92%), Gaps = 11/794 (1%)
Strand=Plus/Plus
Query 1941 AGGTTCCTTCAGTTTGAGGCAACTAAAAGTTGCGACTGATGATTTTAATCCGTCAAATAA 2000
|||||||||||||||||||||||||||||| ||||| | |||||| |||| | ||| ||
Sbjct 1875 AGGTTCCTTCAGTTTGAGGCAACTAAAAGTCGCGACCAACGATTTTGATCCCTTAAACAA 1934
Query 2001 GATTGGAGAAGGCGGCTTCGGATCTGTTTATAAGGGGAGATTACCAGATGGAACATTGAT 2060
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1935 GATTGGAGAAGGCGGCTTTGGATCTGTTTATAAGGGGCGATTACCAGATGGAACATTGAT 1994
Query 2061 TGCGGTAAAGAAGTTATCTTCCAAATCCCATCAAGGTAACAAAGAGTTCGTAAACGAGAT 2120
||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1995 TGCGGTAAAGAAGCTATCTTCCAAATCACATCAAGGTAACAAAGAGTTTGTAAACGAGAT 2054
Query 2121 AGGTATGATCGCTTGCCTGCAGCACCCGAACCTTGTAAAACTTTATGGATGCTGTGTTGa 2180
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 2055 CGGTATGATCGCTTGCCTGCAGCACCCGAACCTTGTGAAGCTTTATGGATGCTGTGTTGA 2114
Query 2181 aaaaaaCCAGCTGCTTCTTGTCTATGAGTACTTGGAGAACAATTGTCTTGCCGATGCATT 2240
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2115 GAAAAACCAGCTGCTTCTTGTCTATGAGTACTTGGAGAACAATTGTCTTTCTGATGCATT 2174
Query 2241 A-TT-C-GGAAGAAG-TGGTCTGAAACTAGACTGGAGAACAAGACACAAAATATGCTTGG 2296
| || | |||||||| | |||| |||||||| ||| ||||||||||||||||||||||||
Sbjct 2175 ATTTGCAGGAAGAAGCT-GTCTCAAACTAGAATGGGGAACAAGACACAAAATATGCTTGG 2233
Query 2297 GAATAGCAAGAGGGCTTGCTTTCCTTCATGAAGATTCAGCGGTTAAGATCATCCATAGAG 2356
|||| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct 2234 GAATCGCGAGAGGGCTTGCTTTCCTCCATGAAGATTCAGCAGTTAAGATCATTCACCGAG 2293
Query 2357 ACATCAAAGGGACAAATATACTTCTAGACAAGGACT-TGAACTCAAAGATCTCAGATTTC 2415
|||| |||||||||||| | || || |||||||| | ||||||||||||| |||||||||
Sbjct 2294 ACATTAAAGGGACAAATGTTCTACTTGACAAGGA-TCTGAACTCAAAGATATCAGATTTC 2352
Query 2416 GGGTTGGCCAGGCTCCATGAAGACGATCGGAGTCACATTACCACCAGAGTTGCAGGAACA 2475
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 2353 GGGTTGGCCAGGCTCCATGAAGACAATCAGAGTCACATTACCACCAGAGTTGCAGGAACA 2412
Query 2476 ATAGGATATATGGCTCCTGAATATGCAATGAGGGGTCACCTAACAGAAAAGGCAGATGTT 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2413 ATAGGATATATGGCTCCTGAATATGCAATGAGGGGTCACCTAACAGAAAAGGCAGATGTT 2472
Query 2536 TACAGCTTCGGTGTAGTAGCAATGGAGATCGTTAGCGGAAAGAGCAACGC-AAATTACAC 2594
|||||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||
Sbjct 2473 TACAGCTTCGGTGTGGTGGCAATGGAGATTGTTAGCGGAAAGAGCAACGCGAAAT-ACAC 2531
Query 2595 GCCAGAT-AGCGAATGTTGCGTTGGCCTTCTCGATTGGGCATTTGTACTACAAAAGAAAG 2653
||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct 2532 GCCAGATGA-CGAATGTTGTGTTGGCCTTCTCGATTGGGCATTTGTGTTGCAAAAGAAAG 2590
Query 2654 GGGCTTTTGCAGAGATTCTTGATCCGAAGCTTGAAGGAGTGTTCAATGTGATGGAAGCAG 2713
||| | | || || ||||| ||||||| ||| |||||| ||||| |||||||||| ||||
Sbjct 2591 GGGATATCGCGGAAATTCTGGATCCGAGGCTGGAAGGAATGTTCGATGTGATGGAGGCAG 2650
Query 2714 AGAGAATGATAAAG 2727
||||||||||||||
Sbjct 2651 AGAGAATGATAAAG 2664
Score = 870 bits (471), Expect = 0.0
Identities = 591/649 (91%), Gaps = 8/649 (1%)
Strand=Plus/Plus
Query 1134 AACCAGACTTCTTCCGTGTTCCGCCATAGA-CAAATGTCAAAATTATAGTAGGTCGTTGC 1192
||||||||||||||| |||||||||||| | | |||| |||||||||||||| ||| |||
Sbjct 1179 AACCAGACTTCTTCCATGTTCCGCCATAAAGC-AATGCCAAAATTATAGTAGATCGCTGC 1237
Query 1193 ATATAAACTGCGGGGGACCTGATGTAACCATCGAAAACTCTAGAGGAAGGTTTCTATATG 1252
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1238 ATATAAACTGTGGGGGACCTGATGTAACCATCGAAAACTCTCGAGGAAGGTTTCTGTATG 1297
Query 1253 AGGGTGATAACTATGGACTTATCGGTTCAGCTACGAACTATTATGGGAAAAGTTGGGGAT 1312
| ||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||||
Sbjct 1298 AAGGTGATAACTATGGACTTACCGGATCAGCTACGAACTATTATAGGAAAAATTGGGGAT 1357
Query 1313 TCAGCAATACTGGTGACTTTATGGATGATGCAATAACAGAAGATACATACACAGTTTCAT 1372
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 ACAGCAATACTGGTGACTTTATGGATGATGCAATAACAGAAGATACATACACAGTTTCAT 1417
Query 1373 CAGAATCTGCAGTCTCTGCAAAATATCCTGACCTTTACCAGAATGCTCGGCGTTCTCCTC 1432
||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct 1418 CAGAATCTGCAGTTTCAGCAAAATATCCAGACCTTTACCAGAATGCTCGGCGCTCTCCCC 1477
Query 1433 TGAATTTGGCTTACT-TCGCATTCTGTTTTAAAAATGGAAGCTACAATGTGAAACTCCAT 1491
| | ||||||||||| | ||||| || || |||||||||||||||||||||||||||||
Sbjct 1478 TCAGTTTGGCTTACTAT-GCATTTTGCTTCGAAAATGGAAGCTACAATGTGAAACTCCAT 1536
Query 1492 TTTGCAGAGATTCAGTTCTCAGATGAGGAACCATTTGCTAGACTAGCAAAACGGTTTTTT 1551
||||||||||||||||||||||||| |||||||| ||| |||||| |||||| |||||
Sbjct 1537 TTTGCAGAGATTCAGTTCTCAGATGTGGAACCATACACTAAACTAGCGAAACGGGTTTTT 1596
Query 1552 AATATTTACGTTCAGGGAAAGTTGATTTGGGAGGATTTCAGCATCAGGGATGAGGCTAAT 1611
|| |||||| ||||||| |||||||||||||||||||||||||| || || |||||||||
Sbjct 1597 AACATTTACATTCAGGGGAAGTTGATTTGGGAGGATTTCAGCATTAGAGAGGAGGCTAAT 1656
Query 1612 GGAACTCACAAGGAAGTTATTAA-AGAAGTGAACACGACCGTGACTGACAACACTTTAGA 1670
||||||||||| |||||||| || |||||| ||||||||||||||||| |||||||||||
Sbjct 1657 GGAACTCACAAAGAAGTTAT-AAGAGAAGTAAACACGACCGTGACTGATAACACTTTAGA 1715
Query 1671 GATACGG-TTGTACTGGGCAGGGAAAGGCACAACAATCATTCCTAAAAGAGGGAACTATG 1729
||||||| || |||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct 1716 GATACGGCTT-TACTGGGCAGGGAAAGGCACAATGATCATTCCTCAAAGAGGGTACTATG 1774
Query 1730 GCTCTCTTATTTCAGCAATCTCAGTCTGTCCCAGTTCGGAATCTGAATG 1778
|||||||||| || ||| ||||||| ||||||||||| |||||||||||
Sbjct 1775 GCTCTCTTATCTCTGCAGTCTCAGTTTGTCCCAGTTCAGAATCTGAATG 1823
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135450746100
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5