BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473180 Length=1217 Score E Sequences producing significant alignments: (Bits) Value AT1G29770.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1869 0.0 AT1G29780.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 268 7e-71 > AT1G29770.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:10424576-10425801 FORWARD LENGTH=1226 Length=1226 Score = 1869 bits (1012), Expect = 0.0 Identities = 1155/1223 (94%), Gaps = 13/1223 (1%) Strand=Plus/Plus Query 1 AAAACTGTTATTTTGCTAAAAATAACTCAGCTTATAAATCACGACCTGAATAAACTGAAC 60 |||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||| Sbjct 11 AAAACTGTTATTTTACTAAAAATAACTCAG-AGCT-AATCACAACCTGAATAAACTGAAC 68 Query 61 TCTACCAAATCAAGTACTCTTCTGTTCCAAAGCCAGTAGCATGGAAGTTAGAACCTTTAA 120 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 69 TCTACCAAATCAAGTCCTCTTCTGTTCCAAAGCCAGTAGCTTGGAAGTTAGAACCTTTAA 128 Query 121 AGCATTATAAACATCTCACCATTTCTCCAGGTTTCCATCTGAGCCAGCTGCAGAAAAGAA 180 ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| Sbjct 129 AGCATTATAAACATCTCACAATTTCTACAGGTTTCCATCTGAGCCAGCTGCACAAAAGAA 188 Query 181 CCCGGAATTCTTTA-CAACGTTTTGAACTCTGATTTCTTGATAATGGCGTGCCATGGATT 239 |||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 189 CCCGGAATTC-TCATCAACGTTTTGAACTCTGATTTCTTGATAATGGCGTGTCATGGATT 247 Query 240 TCTGGGGAAACCGACCCCAAAATCATTTGGGCG---TCATAAACATGCATGGAGAAACC- 295 ||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||| Sbjct 248 TCTGGGGAAACCGACGCCGAAATCATTTGGGCGTCATCATAAACATGCAAGGAAAAACCG 307 Query 296 GACATCATCAATCCAGATGTTCGGCTGCGGCCGTTGCAGCAGCTGGCTCCATCTTCACAT 355 || |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 308 GA-ATCATCAATCCAGATGTTTGGCTGCAGCCGTTGCAGCAGCTGGCTCCATCTTCACAT 366 Query 356 CCCTCAACATGTCTATCTTCACATTCCACAACCGCCTCTTGCGTTGCGTCTCCAGGTTTT 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 CCCTCAACATGTCTATCTTCACATTCCACAACCGCCTCTTGCGTTGCGTCTCCAGGTTTT 426 Query 416 TCCGTCTAGCCACCACATCTAGCGCAACTCCTAGCCATCGAGCCACCATGAAACAAGGCT 475 | ||||| ||||||||||||||||||||||||| || |||| |||||||||||||||||| Sbjct 427 TGCGTCTCGCCACCACATCTAGCGCAACTCCTACCCGTCGACCCACCATGAAACAAGGCT 486 Query 476 ACAAAAAGCTCCAGAAAC-CTGAGCCTCTGAGAAGACGTAATGACAAGAAAAGGACGATC 534 ||||||| ||||| |||| | |||||||||| |||||||||||||||||||||||| ||| Sbjct 487 ACAAAAAACTCCATAAACGC-GAGCCTCTGATAAGACGTAATGACAAGAAAAGGACAATC 545 Query 535 TTTCTTGATCTTGATGAAACATTGGTGCACTCTACAATGGAACCACCAATCCGGGTTAAT 594 |||||||||||||| ||||||||||| || || || |||||||||||||||||||||||| Sbjct 546 TTTCTTGATCTTGACGAAACATTGGTACATTCAACGATGGAACCACCAATCCGGGTTAAT 605 Query 595 GTAGATTTCATGGTGAGGATAAAGATCGAAGGAGCCGTTATACCAATGTTTGTGGTGAAA 654 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 606 GTAGATTTCATGGTGAGGATAAAGATCGAAGGAGCCGTTATACCAATGTTTGTGGTAAAA 665 Query 655 CGACCAGGAGTTACTGAGTTTCTTGAAAGGATTAGTAAGAACTATCGAGTGGCAATCTTC 714 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 666 CGACCAGGAGTTACTGAGTTTCTTGAAAGGATCAGTAAGAACTATCGAGTGGCAATCTTC 725 Query 715 ACAGCCGGGTTACCGGAATATGCTTCACAGGTTTTGGATAAACTTGACAAGAACCGTGTG 774 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 726 ACAGCCGGGTTACCGGAATATGCTTCACAGGTTTTGGATAAACTTGACAAGAATCGTGTG 785 Query 775 ATCTCACAGCGGCTATATCGAGATTCATGCACAGAAATGAATGGAAGATATGCCAAAGAC 834 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 786 ATCTCACAGCGGCTATATCGAGATTCATGCACAGAAGTGAATGGAAGATATGCCAAAGAC 845 Query 835 TTATCTTTGGTGGCAAAAAATGACCTCGGGAGTGTTTTGATAGTTGATGATAACCCTTTC 894 |||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct 846 TTATCTTTGGTGGCGAAGAATGACCTCGGGAGTGTTTTGCTAGTTGACGATAACCCTTTC 905 Query 895 TCCTACTCGTTGCAGCCAGACAATGGAGTTCCCATTAAGCCATTTGTGGATGACATGGAA 954 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 906 TCCTACTCGTTGCAGCCAGACAATGGAGTTCCCATTAAGCCATTTATGGATGACATGGAA 965 Query 955 GATCAAGAACTGATGAAACTTGCAGAATTCTTCGATGGATGTTATCAGTACGAAGATCTA 1014 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 966 GATCAAGAACTAATGAAGCTTGCAGAATTCTTCGATGGATGTTATCAGTACGAAGATCTA 1025 Query 1015 AGGGACGCAGCAGCAGAACTTCTATCCAGCAAGCTGATTTGATGCACATATATATGAAAT 1074 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1026 AGGGATGCAGCAGCAGAACTTCTATCCAGCAAGCTGATTTGATGCACATATATATGGAAT 1085 Query 1075 TTGTTTGCAGAACCTGttttcaatttttttgggattctttctttctttttcttgattttc 1134 |||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||| ||| Sbjct 1086 TTGTTTGCAGAACCTGTTTTCAATCTTTT-GGGATTCTTTCTATCTTTCTCTTGATCTTC 1144 Query 1135 tttGGGGAGAGATGATACAGCCTAACGGTATTTTTATGTTGAAAAAGGATGCTTCCTTAT 1194 ||||||||| |||| ||||| | ||||||||||| ||||||||||||||||| |||||| Sbjct 1145 TTTGGGGAGGGATGGTACAGAGTGACGGTATTTTTGTGTTGAAAAAGGATGCT-CCTTAT 1203 Query 1195 CCTTCTTCAGCGTTTTTACCTAC 1217 ||||||||||||||||||||||| Sbjct 1204 CCTTCTTCAGCGTTTTTACCTAC 1226 > AT1G29780.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:10426950-10427615 FORWARD LENGTH=666 Length=666 Score = 268 bits (145), Expect = 7e-71 Identities = 406/526 (77%), Gaps = 41/526 (8%) Strand=Plus/Plus Query 518 ACAAGAAAAGGACGATCTTTCTTGATCTTGATGAAACATTGGTGCACTCTACAATGGAAC 577 ||| ||||||||| ||| | || |||||||||||||| ||||| ||| | |||| | Sbjct 140 ACATGAAAAGGACAATCATCCTCGATCTTGATGAAACGTTGGTTCACGCAACAA---CA- 195 Query 578 CACCAATCC-GG-GTT-AATGTAGATTTCATGGTGA-GGAT-AAAGATCG-AA-GGAGCC 630 || | ||| || ||| || | ||||||||||||| || | ||| || | || |||| Sbjct 196 CATC-TTCCGGGAGTTAAACAT-GATTTCATGGTGATGG-TGAAA-ATGGAAAGGGAG-- 249 Query 631 GTTATACCAATGTTTGTGGTGAAACGACCAGGAGTTACTGAGTTTCTT-GAAAGGA-TTA 688 | || ||||| |||||||||||||| || || || ||||| ||||| |||| || || Sbjct 250 ATAATGCCAATCTTTGTGGTGAAACGTCCTGGTGTGACTGA-ATTCTTGGAAA-GACTTG 307 Query 689 GT-AAGAACTATC-GAGTGGCAATCTTCACAGCCGGGT-TACCGGAATATGCTTCACAGG 745 || || ||||| | ||||| | | ||||||| | ||| | |||||||||||||||| Sbjct 308 GTGAA-AACTA-CAAAGTGGTAGTTTTCACAG-CTGGTCTGGAAGAATATGCTTCACAGG 364 Query 746 TTTTGGATAAACTTGACAAGAACCGTGTGATCTCACAGCGGCTATATCGAGATTCATGCA 805 ||||||| || || ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 365 TTTTGGACAAGCTAGACAAGAACGGTGTGATCTCACAGCGGCTATATCGAGACTCATGCA 424 Query 806 CAGAAATGAATGG-AAGATATGCCAAAG-ACTTATCTTTGGT-G-GCAAAAAATGACCTC 861 | || |||| || || ||||| |||| ||||||||||||| | | ||| |||||| Sbjct 425 CGGAGGTGAACGGGAA-ATATGT-AAAGGACTTATCTTTGGTAGTGGGGAAA--GACCTC 480 Query 862 GGGAGTGTTTTGATAGTTGATGATAACCCTTTCTCCT-ACTCGTTGCAGCCAGACAATGG 920 | |||| |||||| || ||||| || || | || || |||| || |||||||| ||||| Sbjct 481 AGAAGTGCTTTGATTGTCGATGACAATCCAT-CTTCTTACTCATTACAGCCAGAGAATGG 539 Query 921 AGTTCCCATTAAGCCATTTGTGGATGACATGGAAGATCAAGAACTGATGAAACTTGCAGA 980 ||| || || ||| | |||||||||||| || |||||||||||||| |||| |||| || Sbjct 540 AGTGCCTATAAAGGCTTTTGTGGATGACCTGAAAGATCAAGAACTGTTGAATCTTGTGGA 599 Query 981 ATT-CTTCGATGGATGTTAT-CAGTACGAAGATCTAAGGGACGCAG 1024 || || ||| | ||||| || || |||||| | ||||| |||| Sbjct 600 GTTTCT-CGAAAGCTGTTACGCA-TATGAAGATATGAGGGATGCAG 643 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59788849095 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5