BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473207
Length=1858
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bin... 2588 0.0
AT1G29951.1 | Symbols: CPuORF35 | conserved peptide upstream op... 1986 0.0
AT1G29952.1 | Symbols: CPuORF34 | conserved peptide upstream op... 1986 0.0
> AT1G29950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:10491698-10494598 FORWARD
LENGTH=2131
Length=2131
Score = 2588 bits (1401), Expect = 0.0
Identities = 1757/1917 (92%), Gaps = 72/1917 (4%)
Strand=Plus/Plus
Query 1 AAAGCTTAAGTTTTTACGCATCACCGATTCATTTGATCCAAAGGG-TTTTCATTTCTTCT 59
||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 74 AAAGCTTTAGTTTTTACGCATCACCGATTCATTTGATCCAAAGGGTTTTTGATTTCTTCT 133
Query 60 ACGAGTTTGCGAGAAGAGGAACGGTATTTAAAAATACAC-TAAAAACTTGATATTGCAAG 118
||||||||| ||||||||||||||||||| ||||||| || ||| ||||||||| |||
Sbjct 134 ACGAGTTTGTGAGAAGAGGAACGGTATTT---AATACACTTACAAATTTGATATTGGAAG 190
Query 119 AACCAAAGATGCCCTGGACAGCCTTCTTCATGTTTTTCAACAGGACTTGCACTCGTCTGG 178
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 191 AACCAAAGATGCCCTGGACAGCATTCTTCATGTTTTTCAACAGAACTTGCACTCGTCTGG 250
Query 179 TTGTCTTTTTCCTCGTTATTCTGTAAATTTGATCCTTTCAGGTGAGCCAGCTTCTCATTT 238
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||
Sbjct 251 TTGTCTTTTTCCTCGTTATTCTGTAATTTTGTTCCTTTCAGGTGAGCCAGCCTCTCATTT 310
Query 239 CACATCTTCTGTTTTGGTC-TGCAGTTACTTA-GTCATGAAAACAAATCTTCTTGTTGCC 296
|||||||| |||||| ||| | || || || | || || ||||| || ||||||||
Sbjct 311 CACATCTTGTGTTTTTGTCTTACA-TT-GGTACCTTGTGGAAGCAAATTTTGTTGTTGCC 368
Query 297 ACCTTATTTTTAGCTTCTTTTGTTTAAACTATTGGTGTTC-CTTTCTTGTTTTGCAGGTG 355
||||||| | |||||||| |||| |||||||||| || ||| |||||||||||||||
Sbjct 369 ACCTTATATACAGCTTCTTGTGTTAAAACTATTGG-CATCTCTTCCTTGTTTTGCAGGTG 427
Query 356 TTGTTTCCGGTATCCGGAGTAGCTCTTTGTTGTTGTGCTTATTTTACTGGTTAG--TGTG 413
|||||||||| || |||| ||| |||||||||||||||||||| |||||||||| ||||
Sbjct 428 TTGTTTCCGGAATTCGGAATAGTTCTTTGTTGTTGTGCTTATTATACTGGTTAGTTTGTG 487
Query 414 AGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAATAGGAACTTTT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 AGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAATAGGAACTTTT 547
Query 474 ATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCAGGCTGAATAT 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 ATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCAGGCTGAATAT 607
Query 534 TTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCGGAAATTGGGG 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 608 TTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCGGAAATT-GGG 666
Query 594 GTTTTGAGCGGCTATCTACTTTTGATTTCG----AA---A----GA---ATT-AAGAGTC 638
|||||||||||||||||||||||||||||| || | || || |||||||
Sbjct 667 GTTTTGAGCGGCTATCTACTTTTGATTTCGAAAAAATTTACTGTGAGTTGTTAAAGAGTC 726
Query 639 TGGTATTCTGAAGAGCTG--TGTGGGGGAGCTTCTGGTTTTGGGGGTAAGGGCTCTGGTG 696
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 727 TGGTATTCTGAAGAGCTGTCTGTGGGGGAGCTTCTGGTTTGGGGGGTAAGGGCTCTGGTG 786
Query 697 GAAATTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTGGTT-CGACTG 755
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 787 GAAACTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTGGTTCCGTGTG 846
Query 756 TCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAA-G-G------CGGTAGT 807
||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct 847 TCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAAGGCGACAAATCGGTAGT 906
Query 808 CGAAAA-ATTTAAGCAGCCTGCAGTTTGAGGTGTACAACTTGTTTTTCTCTTTGTGTTT- 865
||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 907 AGAAAATATTCAAGCAGCTTGCAGTTTGAGGTGTACAACTTGTTTTTCTCTTTGCGTTTC 966
Query 866 CGCTTTTACCTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCACTTCTCAGAT 925
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 CTTTTTTACGTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCACTTCTCAGAT 1026
Query 926 GAAGTGGGTGACAGAAATATGCACAATCCGTATGCATCAGGGTCATCCTTTGATGCTTTG 985
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1027 GAAGTGGGTGACAGAAATATGCACAACCCGTATGCATCAGGGTCATCCTATGATGCTTTG 1086
Query 986 TTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTCTGCGGTCTGT 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 TTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTCTGCGGTCTGT 1146
Query 1046 CCAAAGAATTTTGTCATCTTCGATCAAACGTATGACCGCAGCCAAGTGATGTACCATCCT 1105
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1147 CCAAAGAACTTTGTCATCTTCGATCAAACATATGACCGCAGCCAAGTGATGTACCATCCT 1206
Query 1106 GGGCTGACTCACAAGCTCATGAATACCCCATCATTGAACAATTTAGCTTCGACATTTCAG 1165
| ||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct 1207 GAGCTGACTCATAAGCTCATGAATACCCCTTCGTTGAACAATTTAGCTTCGACGTTTCAG 1266
Query 1166 AACGAGTACTCT-GGGGGAAGTTATGGTAACTATGGTAACTATGACCAAGAAGCATCCTC 1224
|||||||| | | |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1267 AACGAGTA-TGTTGGGGGAAGTTATGGTAACTATGGTAACTATGAGCAAGAAGTATCCTC 1325
Query 1225 TTCTTATCAAGAGGATCCGAATGAGATTGATGCCCTCTTGAGCGCAGATGAGGATTATGA 1284
|||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 1326 TTCTTATCAAGAAGATCCAAATGAGATCGATGCTCTCTTGAGCGCAGATGAAGATTATGA 1385
Query 1285 AGA---TGATGATAATGAAGGTGATGAGGATGGTG---ATTCAGAAGAGGTCAGCACTGC 1338
||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct 1386 AGAGAATGATGATAATGAAGGTGAAGAGGATGGTGGTGATTCAGAAGAAGTCAGCACTGC 1445
Query 1339 TCGTAATTCTTCCAGGGATTATGGAAACACCTCAGCAGAATCTTGTTGTTCCAGCTATGG 1398
||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1446 TCGTACTTCTTCCAGGGATTATGGAAACACCACAGCAGAATCTTGTTGTTCCAGTTATGG 1505
Query 1399 GTATaacaacaacaacaacaacaacTCAAGGAAGCAGAGTTTATCGGGCAGTGCTAGTAG 1458
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 TTACAACAACAACAACAACAACAACTCAAGGAAGCAGAGTTTATCGGGCAGTGCTAGTAG 1565
Query 1459 TA--A-CAATGATGGGAAAGGACGGAAAAAGATGAAGAAGATGATGGGAGTGTTGAGGAG 1515
|| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1566 TAGTAACAATGATGGGAAAGGACGTAAAAAGATGAAGAAGATGATGGGAGTATTGAGGAG 1625
Query 1516 AATTGTCCCGGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAGCTGTTCAGTA 1575
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 AATTGTCCCTGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAGCTGTTCAGTA 1685
Query 1576 TCTCAAGTCACTTAAAATCGAAGCACAGAAACTTGGCGTTGGACATTTCTCAAACCAACC 1635
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 1686 TCTCAAGTCACTTAAAATCGAAGCTCAGAAACTTGGCGTTGGACATTTCTCAAACCAATC 1745
Query 1636 TTGAATGCTACCAATATTCG-TTCTTCCACCACTATTGTTTCTTCGA-AGGTAAATCATC 1693
|||||||||||| ||||||| |||||||| ||||||||||||| || ||||||||||||
Sbjct 1746 TTGAATGCTACCGATATTCGGTTCTTCCATCACTATTGTTTCT-CGGGAGGTAAATCATC 1804
Query 1694 GGTCCAGCGCTTATCTGGACCTTTCTCTCTCTATATTCCTCCCTCTA--CTCTCTTCCTT 1751
|||| |||||| |||||||||||||||| | ||| |||||||||||| ||| |||||||
Sbjct 1805 GGTCTAGCGCT-ATCTGGACCTTTCTCT-T-TATTTTCCTCCCTCTATACTCACTTCCTT 1861
Query 1752 TTG----CAGGATGGTATCTACTTTATGTT-GAATCTCTCT-TATATTTTGCTTTT-GTG 1804
||| |||||||||||||| |||||||| |||||||||| | |||||||||||| |||
Sbjct 1862 TTGTTGGCAGGATGGTATCTATTTTATGTTTGAATCTCTCTATGTATTTTGCTTTTTGTG 1921
Query 1805 T-T-ATTGCTTCGATGAAGAAGCT-GTGTTTGCACAAGTACTTGTGGATTTGATTTG 1858
| | | ||||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct 1922 TGTTACTGCTTCGATGAAGAAGCAAG-GTTTGAACAAGTACTTGTGGATTTGATTTG 1977
> AT1G29951.1 | Symbols: CPuORF35 | conserved peptide upstream
open reading frame 35 | chr1:10491975-10494598 FORWARD LENGTH=2150
Length=2150
Score = 1986 bits (1075), Expect = 0.0
Identities = 1281/1373 (93%), Gaps = 44/1373 (3%)
Strand=Plus/Plus
Query 346 TTTGCAGGTGTTGTTTCCGGTATCCGGAGTAGCTCTTTGTTGTTGTGCTTATTTTACTGG 405
||| |||||||||||||||| || |||| ||| |||||||||||||||||||| ||||||
Sbjct 515 TTT-CAGGTGTTGTTTCCGGAATTCGGAATAGTTCTTTGTTGTTGTGCTTATTATACTGG 573
Query 406 TTAG--TGTGAGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAAT 463
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 TTAGTTTGTGAGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAAT 633
Query 464 AGGAACTTTTATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCA 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 634 AGGAACTTTTATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCA 693
Query 524 GGCTGAATATTTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCG 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GGCTGAATATTTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCG 753
Query 584 GAAATTGGGGGTTTTGAGCGGCTATCTACTTTTGATTTCG----AA---A----GA---A 629
|||||| ||||||||||||||||||||||||||||||||| || | ||
Sbjct 754 GAAATT-GGGGTTTTGAGCGGCTATCTACTTTTGATTTCGAAAAAATTTACTGTGAGTTG 812
Query 630 TT-AAGAGTCTGGTATTCTGAAGAGCTG--TGTGGGGGAGCTTCTGGTTTTGGGGGTAAG 686
|| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 813 TTAAAGAGTCTGGTATTCTGAAGAGCTGTCTGTGGGGGAGCTTCTGGTTTGGGGGGTAAG 872
Query 687 GGCTCTGGTGGAAATTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTG 746
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 GGCTCTGGTGGAAACTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTG 932
Query 747 GTT-CGACTGTCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAA-G-G--- 800
||| || ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 933 GTTCCGTGTGTCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAAGGCGACA 992
Query 801 ---CGGTAGTCGAAAA-ATTTAAGCAGCCTGCAGTTTGAGGTGTACAACTTGTTTTTCTC 856
||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 993 AATCGGTAGTAGAAAATATTCAAGCAGCTTGCAGTTTGAGGTGTACAACTTGTTTTTCTC 1052
Query 857 TTTGTGTTT-CGCTTTTACCTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCA 915
|||| |||| | |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 TTTGCGTTTCCTTTTTTACGTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCA 1112
Query 916 CTTCTCAGATGAAGTGGGTGACAGAAATATGCACAATCCGTATGCATCAGGGTCATCCTT 975
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1113 CTTCTCAGATGAAGTGGGTGACAGAAATATGCACAACCCGTATGCATCAGGGTCATCCTA 1172
Query 976 TGATGCTTTGTTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TGATGCTTTGTTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTC 1232
Query 1036 TGCGGTCTGTCCAAAGAATTTTGTCATCTTCGATCAAACGTATGACCGCAGCCAAGTGAT 1095
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1233 TGCGGTCTGTCCAAAGAACTTTGTCATCTTCGATCAAACATATGACCGCAGCCAAGTGAT 1292
Query 1096 GTACCATCCTGGGCTGACTCACAAGCTCATGAATACCCCATCATTGAACAATTTAGCTTC 1155
||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 1293 GTACCATCCTGAGCTGACTCATAAGCTCATGAATACCCCTTCGTTGAACAATTTAGCTTC 1352
Query 1156 GACATTTCAGAACGAGTACTCT-GGGGGAAGTTATGGTAACTATGGTAACTATGACCAAG 1214
||| |||||||||||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct 1353 GACGTTTCAGAACGAGTA-TGTTGGGGGAAGTTATGGTAACTATGGTAACTATGAGCAAG 1411
Query 1215 AAGCATCCTCTTCTTATCAAGAGGATCCGAATGAGATTGATGCCCTCTTGAGCGCAGATG 1274
||| |||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||
Sbjct 1412 AAGTATCCTCTTCTTATCAAGAAGATCCAAATGAGATCGATGCTCTCTTGAGCGCAGATG 1471
Query 1275 AGGATTATGAAGA---TGATGATAATGAAGGTGATGAGGATGGTG---ATTCAGAAGAGG 1328
| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |
Sbjct 1472 AAGATTATGAAGAGAATGATGATAATGAAGGTGAAGAGGATGGTGGTGATTCAGAAGAAG 1531
Query 1329 TCAGCACTGCTCGTAATTCTTCCAGGGATTATGGAAACACCTCAGCAGAATCTTGTTGTT 1388
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1532 TCAGCACTGCTCGTACTTCTTCCAGGGATTATGGAAACACCACAGCAGAATCTTGTTGTT 1591
Query 1389 CCAGCTATGGGTATaacaacaacaacaacaacaacTCAAGGAAGCAGAGTTTATCGGGCA 1448
|||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 CCAGTTATGGTTACAACAACAACAACAACAACAACTCAAGGAAGCAGAGTTTATCGGGCA 1651
Query 1449 GTGCTAGTAGTA--A-CAATGATGGGAAAGGACGGAAAAAGATGAAGAAGATGATGGGAG 1505
|||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1652 GTGCTAGTAGTAGTAACAATGATGGGAAAGGACGTAAAAAGATGAAGAAGATGATGGGAG 1711
Query 1506 TGTTGAGGAGAATTGTCCCGGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAG 1565
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 TATTGAGGAGAATTGTCCCTGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAG 1771
Query 1566 CTGTTCAGTATCTCAAGTCACTTAAAATCGAAGCACAGAAACTTGGCGTTGGACATTTCT 1625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1772 CTGTTCAGTATCTCAAGTCACTTAAAATCGAAGCTCAGAAACTTGGCGTTGGACATTTCT 1831
Query 1626 CAAACCAACCTTGAATGCTACCAATATTCG-TTCTTCCACCACTATTGTTTCT 1677
|||||||| ||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct 1832 CAAACCAATCTTGAATGCTACCGATATTCGGTTCTTCCATCACTATTGTTTCT 1884
Score = 206 bits (111), Expect = 8e-52
Identities = 135/146 (92%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 78 GAACGGTATTTAAAAATACAC-TAAAAACTTGATATTGCAAGAACCAAAGATGCCCTGGA 136
||||||||||| ||||||| || ||| ||||||||| |||||||||||||||||||||
Sbjct 381 GAACGGTATTT---AATACACTTACAAATTTGATATTGGAAGAACCAAAGATGCCCTGGA 437
Query 137 CAGCCTTCTTCATGTTTTTCAACAGGACTTGCACTCGTCTGGTTGTCTTTTTCCTCGTTA 196
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 438 CAGCATTCTTCATGTTTTTCAACAGAACTTGCACTCGTCTGGTTGTCTTTTTCCTCGTTA 497
Query 197 TTCTGTAAATTTGATCCTTTCAGGTG 222
|||||||| |||| ||||||||||||
Sbjct 498 TTCTGTAATTTTGTTCCTTTCAGGTG 523
> AT1G29952.1 | Symbols: CPuORF34 | conserved peptide upstream
open reading frame 34 | chr1:10491975-10494598 FORWARD LENGTH=2165
Length=2165
Score = 1986 bits (1075), Expect = 0.0
Identities = 1281/1373 (93%), Gaps = 44/1373 (3%)
Strand=Plus/Plus
Query 346 TTTGCAGGTGTTGTTTCCGGTATCCGGAGTAGCTCTTTGTTGTTGTGCTTATTTTACTGG 405
||| |||||||||||||||| || |||| ||| |||||||||||||||||||| ||||||
Sbjct 530 TTT-CAGGTGTTGTTTCCGGAATTCGGAATAGTTCTTTGTTGTTGTGCTTATTATACTGG 588
Query 406 TTAG--TGTGAGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAAT 463
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 TTAGTTTGTGAGAATGTGCATTGTTGGAAACAAGAAGGGAAACCGATCATTGAAGGAAAT 648
Query 464 AGGAACTTTTATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCA 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 649 AGGAACTTTTATGATGACTACATGTTTCATTGCTAATTACCAATCCGTTCAAGTTTGCCA 708
Query 524 GGCTGAATATTTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCG 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 GGCTGAATATTTCAGACAGTTGCTTAAGCCTGTAACGTAGTCTAGCGTCTGGAGTTTTCG 768
Query 584 GAAATTGGGGGTTTTGAGCGGCTATCTACTTTTGATTTCG----AA---A----GA---A 629
|||||| ||||||||||||||||||||||||||||||||| || | ||
Sbjct 769 GAAATT-GGGGTTTTGAGCGGCTATCTACTTTTGATTTCGAAAAAATTTACTGTGAGTTG 827
Query 630 TT-AAGAGTCTGGTATTCTGAAGAGCTG--TGTGGGGGAGCTTCTGGTTTTGGGGGTAAG 686
|| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 828 TTAAAGAGTCTGGTATTCTGAAGAGCTGTCTGTGGGGGAGCTTCTGGTTTGGGGGGTAAG 887
Query 687 GGCTCTGGTGGAAATTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTG 746
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GGCTCTGGTGGAAACTCGTGATATCTTTAGTATGATGGCCATAACTTGATATAGCATTTG 947
Query 747 GTT-CGACTGTCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAA-G-G--- 800
||| || ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 948 GTTCCGTGTGTCAACTTAGTGTAGTAGTAACTGAGCAGCTGGAAGCTTACAAAGGCGACA 1007
Query 801 ---CGGTAGTCGAAAA-ATTTAAGCAGCCTGCAGTTTGAGGTGTACAACTTGTTTTTCTC 856
||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1008 AATCGGTAGTAGAAAATATTCAAGCAGCTTGCAGTTTGAGGTGTACAACTTGTTTTTCTC 1067
Query 857 TTTGTGTTT-CGCTTTTACCTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCA 915
|||| |||| | |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 TTTGCGTTTCCTTTTTTACGTTTGCACGGGTTTTCTGATGCAGAACAATCAGTTTCCTCA 1127
Query 916 CTTCTCAGATGAAGTGGGTGACAGAAATATGCACAATCCGTATGCATCAGGGTCATCCTT 975
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1128 CTTCTCAGATGAAGTGGGTGACAGAAATATGCACAACCCGTATGCATCAGGGTCATCCTA 1187
Query 976 TGATGCTTTGTTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 TGATGCTTTGTTCCCACCATGTGCAAAGTTGCCATACCATGGTGTTGAACTTCAACCGTC 1247
Query 1036 TGCGGTCTGTCCAAAGAATTTTGTCATCTTCGATCAAACGTATGACCGCAGCCAAGTGAT 1095
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1248 TGCGGTCTGTCCAAAGAACTTTGTCATCTTCGATCAAACATATGACCGCAGCCAAGTGAT 1307
Query 1096 GTACCATCCTGGGCTGACTCACAAGCTCATGAATACCCCATCATTGAACAATTTAGCTTC 1155
||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 1308 GTACCATCCTGAGCTGACTCATAAGCTCATGAATACCCCTTCGTTGAACAATTTAGCTTC 1367
Query 1156 GACATTTCAGAACGAGTACTCT-GGGGGAAGTTATGGTAACTATGGTAACTATGACCAAG 1214
||| |||||||||||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct 1368 GACGTTTCAGAACGAGTA-TGTTGGGGGAAGTTATGGTAACTATGGTAACTATGAGCAAG 1426
Query 1215 AAGCATCCTCTTCTTATCAAGAGGATCCGAATGAGATTGATGCCCTCTTGAGCGCAGATG 1274
||| |||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||
Sbjct 1427 AAGTATCCTCTTCTTATCAAGAAGATCCAAATGAGATCGATGCTCTCTTGAGCGCAGATG 1486
Query 1275 AGGATTATGAAGA---TGATGATAATGAAGGTGATGAGGATGGTG---ATTCAGAAGAGG 1328
| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |
Sbjct 1487 AAGATTATGAAGAGAATGATGATAATGAAGGTGAAGAGGATGGTGGTGATTCAGAAGAAG 1546
Query 1329 TCAGCACTGCTCGTAATTCTTCCAGGGATTATGGAAACACCTCAGCAGAATCTTGTTGTT 1388
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1547 TCAGCACTGCTCGTACTTCTTCCAGGGATTATGGAAACACCACAGCAGAATCTTGTTGTT 1606
Query 1389 CCAGCTATGGGTATaacaacaacaacaacaacaacTCAAGGAAGCAGAGTTTATCGGGCA 1448
|||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 CCAGTTATGGTTACAACAACAACAACAACAACAACTCAAGGAAGCAGAGTTTATCGGGCA 1666
Query 1449 GTGCTAGTAGTA--A-CAATGATGGGAAAGGACGGAAAAAGATGAAGAAGATGATGGGAG 1505
|||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1667 GTGCTAGTAGTAGTAACAATGATGGGAAAGGACGTAAAAAGATGAAGAAGATGATGGGAG 1726
Query 1506 TGTTGAGGAGAATTGTCCCGGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAG 1565
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 TATTGAGGAGAATTGTCCCTGGAGGAGAACAGATGAATACAGCTTGCGTTCTTGATGAAG 1786
Query 1566 CTGTTCAGTATCTCAAGTCACTTAAAATCGAAGCACAGAAACTTGGCGTTGGACATTTCT 1625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1787 CTGTTCAGTATCTCAAGTCACTTAAAATCGAAGCTCAGAAACTTGGCGTTGGACATTTCT 1846
Query 1626 CAAACCAACCTTGAATGCTACCAATATTCG-TTCTTCCACCACTATTGTTTCT 1677
|||||||| ||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct 1847 CAAACCAATCTTGAATGCTACCGATATTCGGTTCTTCCATCACTATTGTTTCT 1899
Score = 228 bits (123), Expect = 2e-58
Identities = 149/161 (93%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 63 AGTTTGCGAGAAGAGGAACGGTATTTAAAAATACAC-TAAAAACTTGATATTGCAAGAAC 121
|||||| ||||||||||||||||||| ||||||| || ||| ||||||||| ||||||
Sbjct 381 AGTTTGTGAGAAGAGGAACGGTATTT---AATACACTTACAAATTTGATATTGGAAGAAC 437
Query 122 CAAAGATGCCCTGGACAGCCTTCTTCATGTTTTTCAACAGGACTTGCACTCGTCTGGTTG 181
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 438 CAAAGATGCCCTGGACAGCATTCTTCATGTTTTTCAACAGAACTTGCACTCGTCTGGTTG 497
Query 182 TCTTTTTCCTCGTTATTCTGTAAATTTGATCCTTTCAGGTG 222
||||||||||||||||||||||| |||| ||||||||||||
Sbjct 498 TCTTTTTCCTCGTTATTCTGTAATTTTGTTCCTTTCAGGTG 538
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91967398440
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5