BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473227 Length=1514 Score E Sequences producing significant alignments: (Bits) Value AT1G30090.1 | Symbols: | Galactose oxidase/kelch repeat superf... 2302 0.0 > AT1G30090.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:10559561-10561423 REVERSE LENGTH=1610 Length=1610 Score = 2302 bits (1246), Expect = 0.0 Identities = 1436/1527 (94%), Gaps = 16/1527 (1%) Strand=Plus/Plus Query 1 aaaaaaaaTGAGGAAGAGCTGAAAGATTCGCGACGAAGCAAAACAACAGTGTTTATCTAT 60 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 17 AAAAAAAATGAGGAAGAGCTGAAAGATTCGCGACGAAGCAAAACGACAGTG-TTATCTAT 75 Query 61 CGCCGCCTTGTTGTTCTGTTAAACAAGAGTAGAGGAACCAAAGTTGGAAACTTTGATC-T 119 |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| | | Sbjct 76 CGCCGCCTTGTTGTTCTGTTTAACAAGTGTAGAGGAACCAAAGTTGAAAACTTTGAACTT 135 Query 120 CCC----A---T--TGTTAATTACTGATCACTCGAATCTGGAATAGAAGTAAAATGAATG 170 ||| | | |||||||||||||||| ||||||||| ||| |||| | |||| || Sbjct 136 CCCATTGATTTTAATGTTAATTACTGATCATTCGAATCTGAAATTGAAG-CATATGAGTG 194 Query 171 CTTAATCTCTGAGTGTTAAAAGAAGAAGAAGAAGATGCAGAGGGTTAGGGTTTCATCTCA 230 |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 195 CTTAATCTGTGAGTGTTAGAAGAAGTAGAAGAAGATGCAGAGGGTTAGGGTTTCATCTCA 254 Query 231 AAGAGCAGCTGTGCATAAGCTTGGTGATTCTCAGATGACTTTATCTCCCAAATTTAGAGT 290 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 255 AAGAGCAGTTGTGCATAAGCTTGGTGATTCTCAGATGACATTATCTCCCAAATTTAGAGT 314 Query 291 AGCTGCATCGATTCAATCGACATTGTTTGATAGATCATCGGAATTAGAACTGTCTCTTAT 350 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 315 AGCTGCATCGATACAATCGACATTGTTCGATAGATCATCGGAATTAGAACTGTCTCTTAG 374 Query 351 AGGAGAACCCTTGATTCCCGGTTTACCTGACGATGTTGCGCTTAACTGTCTTTTACGGGT 410 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 375 AGGAGAGCCCTTGATTCCCGGTTTACCAGACGATGTTGCGCTTAACTGTCTTTTACGGGT 434 Query 411 TCCAGTTCAAAGCCATGTATCGAGTAGATCCGTGTGCAAGAGATGGCATCTCTTGTTTGG 470 |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 435 TCCAGTTCAAAGCCATGTATCGAGTAAATCCGTGTGCAAGAGATGGCATCTTTTGTTTGG 494 Query 471 TACTAAAGAGACGTTTTTCGCTAAGCGTAAGGAGTTCGGGTTTAAAGACCCGTGGTTGTT 530 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 495 TACTAAAGAGACGTTTTTCGCTAAGCGTAAGGAGTTCGGGTTTAAAGACCCGTGGCTGTT 554 Query 531 CGTGGTTGGGTTTAGTAGATGCACTGGGAAAATCCAATGGAAGGTTTTGGATTTGAGGAA 590 ||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 555 CGTTGTCGGGTTTAGTAGATGCACTGGGAAGATCCAGTGGAAGGTTTTGGATTTGAGGAA 614 Query 591 TCTCACTTGGCACGAAATCCCGGCTATGCCTTGTAGAGACAAAGTTTGTCCTCACGGTTT 650 |||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 615 TCTCACTTGGCATGAAATCCCTGCTATGCCTTGCAGAGATAAAGTTTGTCCTCACGGTTT 674 Query 651 CAGATCGGTTTCGATGCCTCGGGAAGGTACTATGTTTGTATGTGGCGGAATGGTTTCGGA 710 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 675 TAGATCGGTTTCGATGCCTCGCGAAGGTACTATGTTTGTATGTGGTGGAATGGTTTCGGA 734 Query 711 TTCGGATTGCCCTCTTGATTTGGTGTTGAAGTACGATATGGTGAGGAATCATTGGACTGT 770 ||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 735 TTCTGATTGTCCTCTTGATTTGGTGTTGAAGTATGATATGGTGAAGAATCATTGGACTGT 794 Query 771 CACGaaaaaaaTGATAACCGCGAGGTCGTTTTTTGCTAGCGGTGTGATCGATGGGATGAT 830 ||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 795 CACTAACAAGATGATAACCGCGAGGTCGTTTTTCGCTAGCGGTGTGATCGATGGGATGAT 854 Query 831 ATACGCGGCAGGTGGAAATGCTGCGGATTTATATGAGCTTGATTCTGCCGAGGTTTTGAA 890 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 855 ATACGCGGCAGGTGGAAATGCTGCGGATTTATATGAGCTTGATTGTGCCGAGGTTTTGAA 914 Query 891 CCCTTTGGATGGGAATTGGCGGCCAGTTTCAAATATGGTCGCACACATGGCGTCTTACGA 950 |||||||||||||||||||||||||||||| || ||||| || || |||||||||||||| Sbjct 915 CCCTTTGGATGGGAATTGGCGGCCAGTTTCGAACATGGTAGCTCATATGGCGTCTTACGA 974 Query 951 CACAGCAGTCTTAAACGGGAAGCTCTTGGTGACAGAAGGATGGCTATGGCCGTTCTTTGT 1010 |||||| || |||||||||||||| ||||| || ||||||||| |||||||||||||||| Sbjct 975 CACAGCGGTTTTAAACGGGAAGCTTTTGGTAACGGAAGGATGGTTATGGCCGTTCTTTGT 1034 Query 1011 ATCCCCAAGAGGTCAAGTTTATGACCCGAGGACGGATCAATGGGAAACAATGTCAATGGG 1070 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 ATCCCCGAGAGGTCAAGTTTATGACCCGAGGACGGATCAATGGGAAACAATGTCAATGGG 1094 Query 1071 GTTAAGAGAAGGATGGACCGGGACAAGTGTCGTGATTTATGATCGGTTGTTTATAGTTTC 1130 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1095 GCTAAGAGAAGGATGGACCGGGACGAGTGTCGTGATTTATGATCGGTTGTTTATAGTTTC 1154 Query 1131 GGAATTAGAGAGAATGAAGATGAAGGTTTATGATCCGGTTACGGATTCGTGGGAGACGAT 1190 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1155 GGAGTTAGAGAGAATGAAGATGAAGGTTTATGATCCGGTTACAGATTCGTGGGAGACGAT 1214 Query 1191 TAACGGACCGGAATTGCCTGAGCAGATTTGTAGACCGTTTGCGGTTAACTGTTACGGGAA 1250 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1215 TAACGGACCGGAATTGCCTGAGCAGATTTGTAGACCGTTTGCGGTTAACTGTTATGGGAA 1274 Query 1251 CAGAGTATTTGTGGTTGGTAGGAATCTTCATCTCGCGGTTGGGAATATTTGGCAGTCGGA 1310 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1275 CAGAGTATATGTGGTTGGTAGGAATCTTCATCTCGCGGTTGGGAATATTTGGCAGTCGGA 1334 Query 1311 GAATAAGTTTGGTGTGAGGTGGGAGGTCGTTGAGTCGCCGGAGCGTTATGCTGGTATAAC 1370 ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||| Sbjct 1335 GAATAAGTTTGCTGTGAGGTGGGAGGTTGTTGAGTCGCCGGAGCGTTATGCAGATATAAC 1394 Query 1371 TCCATCGAATTCTCAGATTCTTTTTGCTTAAAAGAGATTTGATAAATCTGTTTACTTTGG 1430 ||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||| Sbjct 1395 TCCATCGAATTCTCAGATTCTTTTTGCTTAAAAGAGATTTGATCAGTCTGTTTGGTATGG 1454 Query 1431 ATTTC-AATTGTTTGTGAACCATATTGTATGAATAAGTAAA--CTTGTCTTGGAAACATC 1487 |||| || ||| |||||||||||||||||||||||||||| |||||||| | |||||| Sbjct 1455 -TTTCCAAATGTCTGTGAACCATATTGTATGAATAAGTAAAAACTTGTCTTAGTAACATC 1513 Query 1488 ATCATGATGTTTGAACTCTTGTATCAT 1514 ||||||||||||||||||||||||||| Sbjct 1514 ATCATGATGTTTGAACTCTTGTATCAT 1540 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74698410960 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5