BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg473254

Length=1241
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G30300.1 | Symbols:  | Metallo-hydrolase/oxidoreductase supe...  1965    0.0  


> AT1G30300.1 | Symbols:  | Metallo-hydrolase/oxidoreductase superfamily 
protein | chr1:10672998-10675368 FORWARD LENGTH=1368
Length=1368

 Score = 1965 bits (1064),  Expect = 0.0
 Identities = 1193/1252 (95%), Gaps = 22/1252 (2%)
 Strand=Plus/Plus

Query  1     TACGTTCGACTTTAGATTCCTCCTTCGCCGGAATATTCCATACGTAAGAGATACTGAAAT  60
             |||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct  22    TACGTTCGACTCCAGATTCCTCCTTTGCCGGAATATTCCATACGTAAGAGATATTGAAAT  81

Query  61    CGCCGATGATGGAAAGTTTGATTCCGGCTGAGAACGGCTTTGTTACCTCTGATCGTGATA  120
             |||||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||
Sbjct  82    CGCCGATGATGGAAAGTTCGATTCCGTCTGAGAACGGCTCCGTTACCTCTGATCGTGATA  141

Query  121   GATCGGCACTAATATTCCTCGGAACTGGATGTTCGAGCGCGGTACCTAACGCAATGTGCT  180
             ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct  142   GATCGGCTCTAATATTCCTAGGAACTGGATGTTCAAGCGCGGTACCTAACGCAATGTGCT  201

Query  181   TGATCCAGCGATCTGATAGTCCCTGCTATGTTTGTTCCCAGTCTCTTTCGATCCCGCCTG  240
             |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct  202   TGATCCAGCGATCTGATAATCCCTGCTATGTTTGTTCCCAGTCTCTTTCAATCCCGCCTG  261

Query  241   AGAAAAATCCTAATTACAGGGGGAATACTTCACTGCTCATTGATTATTGCCAAATTGATG  300
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  262   AGAAAAATCCTAATTACAGGGGGAATACTTCACTGCTCATTGATTATTGCCAAAGTGATG  321

Query  301   GCAAACATAAATACATTCAAATCGATGTTGGCAAGACTTTCAGGGAACAAGTCCTTCGTT  360
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  322   GCAAACATAAATACATTCAAATCGATGTTGGCAAGACTTTCAGAGAACAAGTCCTTCGTT  381

Query  361   GGTTTACTCTTCACAAGATTCCTCAAGTTGATTCTATCATTTTGACTCATGAACATGCTG  420
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  382   GGTTTACTCTTCACAAGATTCCTCAAGTTGATTCTATAATTTTGACTCATGAACATGCTG  441

Query  421   ATGCAGTACTTGGCCTGGATGATATACGTTCAGTGCAACCATTTAGTCCTACTAATGATA  480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  442   ATGCAGTACTTGGCCTGGATGATATACGTTCAGTGCAACCATTTAGTCCTACTAATGATA  501

Query  481   TTGATCCTACTCCAATTTTTGTAAGCCAATACGCTATGGACAGCCTTGCTGTGAAGTTCC  540
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  502   TTGATCCTACTCCAATTTTTGTAAGCCAATACGCTATGGAAAGCCTTGCTGTGAAGTTCC  561

Query  541   CGTATTTGGTTCAGAAGAAACTTAAAGAAGGCCAAGAAGTTAGGCGAGTAGCACAGCTGG  600
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  562   CGTATTTGGTTCAGAAGAAACTTAAAGAAGGCCAAGAAGTTAGGCGAGTAGCACAGCTAG  621

Query  601   ATTGGAGAATAATTGAAGAAGATTGTGAGAAGCCATTTGTAGCTTCAGGTTTATCATTCA  660
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  622   ATTGGAGAGTAATTGAAGAAGATTGTGAGAAGCCATTTGTAGCTTCAGGTTTATCATTCA  681

Query  661   CGCCACTTCCAGTGATGCATGGAGAAGACTATGTATGTCTTGGTTTCCTTTTTGGTGAAA  720
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  682   CGCCACTTCCAGTGATGCATGGAGAAGACTATGTATGTCTTGGCTTCCTTTTTGGTGAAA  741

Query  721   AATCAAGAGTGGCGTATATATCCGATGTATCACGGTTTCCTCCAAACACCGAGTATGCTA  780
             ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  742   AATCAAGAGTGGCTTATATATCCGATGTTTCACGGTTTCCTCCAAACACCGAGTATGCTA  801

Query  781   TATCAAAATCTGGTGGTGGACAATTGGATCTCCTTATCTTGGATACATTGTATAAGACAG  840
             ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct  802   TATCAAAATCTGGTGGTGGACAATTGGATCTCCTTATTTTGGATACATTATATAAGACAG  861

Query  841   GATCTCACAACACCCACTTATGTTTCCCGCAGACATTAGACACAATCAAAAGACTGAGTC  900
             |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  862   GATCCCACAACACTCACTTATGTTTCCCGCAGACACTAGACACAATCAAAAGACTGAGTC  921

Query  901   CAAAAAGGGCTCTTCTAATCGGAATGACTCACGAGTTTGAGCATCACAAGGACAACGAGT  960
             |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct  922   CAAAAAGGGCTCTTCTGATTGGAATGACTCACGAGTTTGATCATCACAAGGACAACGAGT  981

Query  961   TTCTTGAAGAATGGTCTAAAAGGGAAGGGATTTCAGTAAAACTCGCTCATGATGGCTTGA  1020
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  982   TTCTTGAAGAATGGTCTAAAAGGGAAGGGATTTCAGTAAAACTCGCTCATGATGGCTTGA  1041

Query  1021  GAGTCCCAATAGACCTATGAAGAGGTGAAAATGATTACTTG--------A--AAGGAAAA  1070
             |||||||||||||||||||||||||||||||||||||||||        |  || |||| 
Sbjct  1042  GAGTCCCAATAGACCTATGAAGAGGTGAAAATGATTACTTGGCTTTCTCATTAACGAAAC  1101

Query  1071  TAAAATCATTGCCTTATTTTTTATC-GACTTCTGGAGTTCTGGTTAATTCAATGATGATG  1129
             ||| ||||||||||||||||||||| |||||||| | |||     | | |||||| || |
Sbjct  1102  TAAGATCATTGCCTTATTTTTTATCTGACTTCTG-A-TTC-----ACT-CAATGAGGAAG  1153

Query  1130  CTTGTAGGTCTTCTTGTGTTAAGATAGAGAGATAGAGAGCGGAGTGAAACGGTTTTGTTC  1189
             ||||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||
Sbjct  1154  CTTGTAGGTCTCCTTGTGTTA---TAGAGAGATAGAGAGCGGAGTGAAACGGTTTTGTTC  1210

Query  1190  AAGATGCATAATGCTCGCATGGCTTCATATCAACATTATCACTAATGTTTTT  1241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1211  AAGATGCATAATGCTCGCATGGCTTCATATCAACATTATCACTAATGTTTTT  1262



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 60993662175


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5