BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473276 Length=1402 Score E Sequences producing significant alignments: (Bits) Value AT1G30480.1 | Symbols: DRT111 | D111/G-patch domain-containing ... 1940 0.0 > AT1G30480.1 | Symbols: DRT111 | D111/G-patch domain-containing protein | chr1:10790022-10792575 FORWARD LENGTH=1609 Length=1609 Score = 1940 bits (1050), Expect = 0.0 Identities = 1324/1445 (92%), Gaps = 64/1445 (4%) Strand=Plus/Plus Query 1 TCTCGCACAAATCAA-TTTAAGAACGTTGGCTTCTATTGCAAGAAT-T--AT-------- 48 ||||||||||||||| ||||| | |||||||||||||||||||||| | || Sbjct 50 TCTCGCACAAATCAATTTTAA-AGCGTTGGCTTCTATTGCAAGAATCTAAATAGCCCAGA 108 Query 49 AAAT-AAAT---A-GCCAACATATTTCTCCTTTGTTAGTCGGtttttttttttCGaaaaa 103 |||| |||| | | ||| |||||||||||||||| ||||||||||| ||||| || | Sbjct 109 AAATAAAATAAAAGGACAAAATATTTCTCCTTTGTTTGTCGGTTTTTTATTTTC-CAACA 167 Query 104 aaCATAATAACTTT-TATTTATTTGGTCTTTATTTTCGGAAGGCTGATCGG--------- 153 || || || | ||| | |||| || | ||| || | |||||||||||| Sbjct 168 AA-ATGAT-A-TTTGT-TTTA-TT--T-ATTA-TTAC-TAAGGCTGATCGGAAAAAATTA 217 Query 154 AAAACCCTAATTTGAGCAGATCTTTCC-ATTGAAAGCGAACCGTGAA-TCAGAAGATTTT 211 ||||||||||||||||||||||||||| ||||||||||||||||||| | | || | | Sbjct 218 AAAACCCTAATTTGAGCAGATCTTTCCAATTGAAAGCGAACCGTGAATTTTG-AG--TCT 274 Query 212 C-TTACCAGCGGCG-AAAAATGCTTGGTGGATTATACGGAGATCTTCCTCCACCGTCCGA 269 | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 275 CTTTACCGGCGGCGAAAAAATGCTTGGTGGATTATACGGAGATCTTCCTCCACCGACCGA 334 Query 270 TGATGAGAAACCCAGCGGAAACTCCTCCTCCGTCTGGTCAAGCAGTACCAAAATGGCTCC 329 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 335 TGATGAGAAACCCAGTGGAAACTCCTCTTCCGTCTGGTCAAGCAGTACCAAAATGGCTCC 394 Query 330 ACCTACGCTTCGCAAACCACCTGCTTTTGCTCCGCCGCAAACAATCCTAAGACCTCAGAA 389 |||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||| || Sbjct 395 ACCTACACTTCGCAAACCACCAGCTTTTGCTCCCCCGCAAACAATCTTAAGACCTCTCAA 454 Query 390 CAAACCAAAACCTATCGTGTCATCGCAGTACAAGCCTCCTCCTCCTTCTTCTACTAATTC 449 |||||| ||||||||||| || | | |||||||||||||||| | | | | | ||||| Sbjct 455 CAAACCTAAACCTATCGTTTCGGCTCCGTACAAGCCTCCTCCT-C--C-T-T-CGAATTC 508 Query 450 ATCGCAATCGGTGCTTACTCCGGCGAACGAATCAGCACCTTCGCATCAGCCAGCA----T 505 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | Sbjct 509 ATCGCAATCGGTGCTTATTCCGGCGAACGAATCAGCACCTTCGCATCAGCCTGCATTGGT 568 Query 506 TGGT-TG----CATCGGTGATTGAAGAGTACGATCCAGCGAGACCTAACGATTACGAGGA 560 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 TGGTGTGACTTCATCGGTGATTGAAGAGTACGATCCAGCGAGACCTAACGATTACGAGGA 628 Query 561 GTATAAAAGGGAGCAGAAGAGGAAAGCTATGgaagctgagatgaagcgagagcttgataa 620 |||||| |||||| ||||||||||||||| ||||||||||||||| |||||| | ||||| Sbjct 629 GTATAAGAGGGAGAAGAAGAGGAAAGCTACGGAAGCTGAGATGAAACGAGAGATGGATAA 688 Query 621 gagaaggcaagaggaagaggaaagagacaagagagaaagagaagagagggacaaggaaag 680 ||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 689 GAGAAGGCAAGAGGATGAGGAAAGAGATAAGAGAGAAAGAGAAGAGAGGGAGAAGGAGAG 748 Query 681 agagagagaTAACAGTGATCCGTCTCGATTGAATATCTCCGGTGAGGAAGCGTGGAAGAG 740 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 749 AGAGAGAGATAACAGTGATCCGTCTCGGTTGAATATCTCCGGTGAGGAAGCGTGGAAGAG 808 Query 741 ACGCGCTGCTATGAGTGGTGGTGGAAGTGGTGGGAAGCGAAGATCTTCGTCTCCGCCTGG 800 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 809 ACGCGCTGCTATGAGTGGTGGTGGAAGTGGTGGGAAGGGAAGATCTTCGTCTCCGCCGGG 868 Query 801 GAATGTTGATGGGTTTAGTATCGGGAAATCGGAGACGAGTGGGTTAGGAGTTGGAGCAGG 860 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 869 GAATGTTGATGGGTTTAGTATTGGGAAATCGGAGACGAGTGGGTTAGGAGTAGGAGCAGG 928 Query 861 TGGGCAGATGACAGCTGCTCAGAGGATGATGGCGAAGATGGGATGGAAACAAGGACAAGG 920 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 929 TGGACAGATGACAGCTGCTCAGAGGATGATGGCGAAGATGGGATGGAAACAAGGACAAGG 988 Query 921 GCTTGGGAAATCAGAGCAAGGGATTACTACGCCATTGATGGCTAAGAAGACTGATCGTAG 980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 989 GCTTGGGAAATCAGAGCAAGGGATTACTACGCCATTGATGGCTAAGAAGACTGATCGTAG 1048 Query 981 AGCTGGTGTGATTGTGAATGCTAGTGAGAATAAATCTTCTTCGGCGGAGAAGAA-G--GT 1037 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 1049 AGCTGGTGTCATTGTCAATGCTAGTGAGAATAAATCTTCTTCGGCGGAGAAGAAGGTTGT 1108 Query 1038 TAAGAGTGTTAATATCAATGGTGAACCAACCAGGGTTTTGCTTCTTAGAAACATGGTTGG 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 TAAGAGTGTTAATATCAATGGTGAACCAACCAGGGTTTTGCTTCTTAGAAACATGGTTGG 1168 Query 1098 GCCAGGAGAAGTAGATGATGAGCTAGAAGATGAGGTGGGAGGCGAGTGTGGCAAATACGG 1157 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1169 GCCAGGACAAGTAGATGATGAGCTAGAAGATGAGGTAGGAGGCGAGTGTGGCAAATACGG 1228 Query 1158 TACAGTCACTCGTGTACTGATATTCGAGATCACTGAACCGAACTTCCCTGTACACGAAGC 1217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1229 TACAGTCACTCGTGTACTGATATTCGAGATCACTGAACCGAACTTCCCTGTACACGAAGC 1288 Query 1218 AGTAAGAATCTTTGTTCAGTTTTCAAGACCCGAGGAAACAACTAAAGCCCTTGTAGACCT 1277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1289 AGTAAGAATCTTTGTTCAGTTTTCAAGACCCGAGGAAACAACTAAAGCCCTTGTAGACCT 1348 Query 1278 CGATGGGAGATACTTTGGAGGAAGAACTGTACGTGCAACATTCTATGATGAGGAGAAATT 1337 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1349 CGATGGGAGATACTTTGGAGGAAGAACCGTACGTGCAACGTTCTATGATGAAGAGAAATT 1408 Query 1338 CAGTAAGAACGAGTTGGCTCCAGTTCCAGGTGAAATCCCTGGCTATTAACAACTCCTAAG 1397 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1409 CAGTAAGAACGAGTTGGCTCCAGTTCCAGGTGAAATCCCTGGCTATTAATAACTCCTAAG 1468 Query 1398 ACAAA 1402 ||||| Sbjct 1469 ACAAA 1473 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69075949920 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5