BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473277
Length=2838
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper fam... 4383 0.0
AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-... 2446 0.0
AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8 | ... 289 1e-76
> AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper family
protein / lipid-binding START domain-containing protein
| chr1:10796135-10800961 REVERSE LENGTH=2936
Length=2936
Score = 4383 bits (2373), Expect = 0.0
Identities = 2700/2852 (95%), Gaps = 45/2852 (2%)
Strand=Plus/Plus
Query 1 GAGCAAATGAAAAATACCCAAAAAACTCTTTTCCCCAACCATTACCATCTCATGAACACT 60
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 9 GAGCAAATGAAAAAAACCCAAAAAACTCTTTTCTCCAACCATTACCATCTCATGAACACT 68
Query 61 CTCAAAGGAGGCTCTCTCTTCTCAGAGAGCCTACCCATCT-A-ATTTCTTCATCTGGGTC 118
|||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||
Sbjct 69 CTCACAGGAGGCTCTCTCTTCTCAGAGAGCCTACCCATCTAATATTTCTTCATCTGAGTC 128
Query 119 TCATTT-CTTTCCCTCAAAGTATCGATCTTTACTCTTCTCGTTTGT-AA----C-C-ctc 170
|| ||| | ||| ||||||||||||||||||| |||||| ||||| || | | |||
Sbjct 129 TCTTTTAC-TTCTCTCAAAGTATCGATCTTTATTCTTCT-TTTTGTAAACCCTCTCTCTC 186
Query 171 tctc-----tct-ct---c--tTTGGAAGTTATGATGG--C-TCACTCCATGGACGACAG 216
|||| ||| || | |||||||| |||||||| | ||||||||||||||| ||
Sbjct 187 TCTCTGATTTCTACTGACCTGTTTGGAAGATATGATGGCTCATCACTCCATGGACGATAG 246
Query 217 AGACTCTCCTGACAAAGGATTTGATTCCGGCAAGTACGTTAGATACACGCCGGAACAAGT 276
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 AGACTCTCCTGATAAAGGATTTGATTCCGGCAAGTACGTTAGATACACGCCGGAACAAGT 306
Query 277 TGAAGCTCTTGAGAGAGTTTATGCTGAGTGTCCTAAACCTAGCTCTCTCAGAAGACAACA 336
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 307 TGAAGCTCTTGAGAGAGTTTATGCTGAGTGTCCTAAACCTAGCTCTCTGAGAAGACAACA 366
Query 337 GCTTATTCGTGAATGTCCGATTCTCTGTAACATCGAGCCTCGACAGATCAAAGTTTGGTT 396
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 367 GCTTATTCGTGAATGTCCCATTCTCTGTAACATCGAGCCTCGACAGATCAAAGTTTGGTT 426
Query 397 CCAGAATCGCAGATGTCGAGAGAAGCAGAGGAAAGAGTCAGCTCGTCTTCAGACAGTGAA 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 CCAGAATCGCAGATGTCGAGAGAAGCAGAGGAAAGAGTCAGCTCGTCTTCAGACAGTGAA 486
Query 457 CAGGAAGCTGAGTGCCATGAACAAGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCA 516
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 CAGGAAGCTGAGTGCTATGAACAAGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCA 546
Query 517 AGTCTCCAACTTGGTTTATGAGAATGGGTTCATGAAACATCGAATCCACACTGCTTCTGG 576
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 547 AGTCTCCAACTTGGTTTATGAGAATGGATTCATGAAACATCGAATCCACACTGCTTCTGG 606
Query 577 GACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGATTGGTCAGCAACGTCAGCAGCA 636
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 607 GACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGCAACGTCAGCAGCA 666
Query 637 AAACCCAACACATCAGCATCCACAGCGTGATGCTAACAACCCAGCTAATCTTCTCTCGAT 696
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 667 AAACCCAACACATCAGCATCCTCAGCGTGATGTTAACAACCCAGCTAATCTTCTCTCGAT 726
Query 697 TGCGGAGGAGACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTCGACTGGGT 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 TGCGGAGGAGACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTCGACTGGGT 786
Query 757 TCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTAGCTGTTTCACGCAA 816
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 787 CCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTAGCTGTTTCACGCAA 846
Query 817 CTGCAGTGGAATAGCAGCACGTGCCTGCGGCCTCGTGAGTTTAGAACCCATGAAGGTCGT 876
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 847 CTGCAGTGGAATAGCAGCACGTGCCTGTGGCCTCGTGAGTTTAGAACCCATGAAGGTCGC 906
Query 877 TGAAATCCTCAAAGATCGTCCATCTTGGTTCCGTGACTGTCGATGTGTCGAGACTCTGAA 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 TGAAATCCTCAAAGATCGTCCATCTTGGTTCCGTGACTGTCGATGTGTCGAGACTCTGAA 966
Query 937 TGTTATACCTACTGGAAATGGTGGTACTATTGAGCTTGTCAACACTCAGATTTATGCTCC 996
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 967 TGTTATACCCACTGGAAATGGTGGTACTATCGAGCTTGTCAACACTCAGATTTATGCTCC 1026
Query 997 TACAACATTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGTACAAGTCTAGAAGA 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 TACAACATTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGTACAAGTCTAGAAGA 1086
Query 1057 TGGAAGCTATGTGGTTTGTGAGAGGTCACTCACTTCTGCAACTGGTGGCCCCAATGGTCC 1116
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1087 TGGAAGCTATGTGGTCTGTGAGAGATCACTCACTTCTGCAACTGGTGGCCCCAATGGTCC 1146
Query 1117 GCTTTCTTCAAGCTTCGTGAGAGCCAAAATGCTGTCAAGCGGGTTTCTTATCCGTCCTTG 1176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 ACTTTCTTCAAGCTTCGTGAGAGCCAAAATGCTGTCAAGCGGGTTTCTTATCCGTCCTTG 1206
Query 1177 TGATGGTGGTGGTTCCATTATCCACATCGTTGATCATGTTGACCTGGATGTCTCAAGTGT 1236
||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct 1207 TGATGGTGGTGGTTCCATTATTCACATCGTTGATCATGTGGACTTGGATGTCTCAAGTGT 1266
Query 1237 TCCTGAAGTCCTGAGGCCTCTTTATGAGTCTTCCAAAATTCTTGCTCAGAAAATGACCGT 1296
|||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 1267 TCCTGAAGTCCTCAGGCCTCTTTATGAGTCTTCCAAAATCCTTGCTCAAAAAATGACTGT 1326
Query 1297 GGCTGCTTTGAGACATGTGAGGCAAATTGCTCAAGAGACTAGTGGAGAAGTCCAGTATAG 1356
|||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1327 CGCTGCTCTGAGACATGTGCGCCAAATTGCTCAAGAGACTAGTGGAGAAGTCCAGTATAG 1386
Query 1357 TGGTGGAAGACAGCCTGCAGTTTTAAGAACTTTCAGCCAAAGACTCTGCCGGGGTTTCAA 1416
||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1387 TGGTGGACGCCAGCCTGCAGTTTTAAGGACTTTCAGCCAGAGACTCTGCCGGGGTTTCAA 1446
Query 1417 TGATGCTGTTAATGGTTTTGTTGATGATGGGTGGTCTCCAATGAGTAGTGATGGAGCAGA 1476
||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |||
Sbjct 1447 TGATGCTGTAAATGGTTTTGTCGATGATGGATGGTCTCCAATGAGTAGTGATGGAGGAGA 1506
Query 1477 GGATATTACAATCATGATTAACTCTTCCTCTGCTAAATTCGCTGGCTCCCAATACGGTAG 1536
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1507 GGATATTACGATCATGATTAACTCTTCCTCTGCTAAATTTGCTGGCTCCCAATACGGTAG 1566
Query 1537 CTCATTTCTTCCAAGTTTTGGAAGTGGTGTCCTGTGTGCCAAAGCTTCTATGCTGTTGCA 1596
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1567 CTCATTTCTTCCAAGTTTTGGAAGTGGTGTCCTCTGTGCCAAAGCTTCTATGCTGTTGCA 1626
Query 1597 GAATGTTCCACCCCTTGTACTAATTCGTTTCCTGAGAGAACACCGAGCTGAATGGGCAGA 1656
||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||
Sbjct 1627 GAATGTTCCACCCCTTGTATTGATTCGGTTCCTGAGAGAACACCGAGCTGAATGGGCAGA 1686
Query 1657 CTATGGTGTTGATGCCTATTCTGCTGCATCTCTCAGGGCAACTCCAT-TCACTGTTCCAT 1715
||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||
Sbjct 1687 CTATGGTGTCGATGCCTATTCTGCTGCATCTCTCAGAGCAACTCCATATG-CTGTTCCAT 1745
Query 1716 GCGTTAGAACCGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCTCTCGCACAGACACTTG 1775
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1746 GCGTCAGAACCGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCTCTCGCACAGACACTCG 1805
Query 1776 AACATGAAGAGTTTCTCGAAGTGGTCAGACTCGGAGGTCATGCTTACTCACCCGAAGACA 1835
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1806 AACATGAAGAGTTTCTCGAAGTGGTTAGACTTGGAGGTCATGCTTACTCACCTGAAGACA 1865
Query 1836 TGGGTTTATCCCGGGATATGTATTTACTGCAGCTTTGCAGCGGCGTTGATGAAAATGTGG 1895
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1866 TGGGCTTATCCCGGGATATGTATTTACTGCAGCTTTGTAGCGGCGTTGATGAAAATGTGG 1925
Query 1896 TTGGAGGTTGTGCTCAGCTTGTCTTTGCCCCAATCGATGAATCATTTGCTGATGATGCAC 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1926 TTGGAGGTTGTGCTCAGCTTGTCTTTGCCCCAATCGATGAATCATTTGCTGATGATGCAC 1985
Query 1956 CTTTGCTTCCTTCTGGTTTCCGTGTCATACCGCTCGACCAGAAAACAAATCCGAATGATC 2015
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1986 CTTTGCTTCCTTCTGGTTTCCGTGTCATACCACTCGACCAAAAAACAAATCCGAATGATC 2045
Query 2016 ATCAGTCTGCAAGTCGAACACGGGATCTAGCATCATCTCTAGATGGTTCCACGAAAACCG 2075
|||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct 2046 ATCAATCTGCAAGTCGAACACGGGATCTAGCATCGTCCCTAGATGGTTCCACCAAAACCG 2105
Query 2076 ATTCAGAAACAAACTCCAGATTGGTCTTAACAATAGCCTTCCAGTTCACATTTGATAATC 2135
|||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2106 ATTCGGAAACAAACTCTAGATTGGTCTTAACAATAGCCTTCCAGTTCACGTTTGATAACC 2165
Query 2136 ATTCAAGAGACAATGTTGCTACAATGGCGAGACAGTATGTGAGGAATGTTGTTGGTTCGA 2195
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2166 ATTCCAGAGACAATGTTGCTACAATGGCGAGACAGTATGTGAGGAACGTTGTTGGTTCGA 2225
Query 2196 TTCAGAGAGTGGCTTTAGCCATTACGCCTCGTCCTGGCTCAATGCAACTTCCCACTTCCC 2255
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2226 TTCAGAGAGTGGCTCTAGCCATTACGCCTCGTCCTGGCTCAATGCAACTTCCCACTTCCC 2285
Query 2256 CTGAAGCTCTCACCCTTGTCCGTTGGATCACCCGTAGTTACAGCATTCACACAGGTGCTG 2315
||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 2286 CTGAAGCTCTCACTCTTGTCCGTTGGATCACCCGTAGTTACAGTATTCATACAGGTGCAG 2345
Query 2316 ACCTGTTTGGAGCTGATTCTCAGTCCTGTGGAGGAGACACGTTGCTTAAGCAACTCTGGA 2375
| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2346 ATCTGTTTGGAGCTGATTCTCAGTCCTGTGGAGGAGACACATTGCTTAAGCAACTCTGGG 2405
Query 2376 ACCATTCTGATGCCATATTGTGCTGCTCCCTCAAAACTAATGGATCACCGGTATTCACAT 2435
||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 2406 ACCATAGTGATGCCATATTGTGCTGCTCCCTGAAAACTAATGCCTCACCGGTATTCACAT 2465
Query 2436 TTGCAAACCAAGCCGGTTTAGACATGCTTGAAACAACGCTCGTGGCACTTCAGGATATAA 2495
||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||
Sbjct 2466 TTGCAAACCAAGCTGGTTTAGACATGCTTGAAACTACACTTGTGGCACTTCAGGATATAA 2525
Query 2496 TGCTCGACAAAACGCTTGATGACTCTGGTCGTAAAGCTCTTTGCTCCGAATTCGCCAAGA 2555
||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 2526 TGCTCGACAAAACACTTGATGACTCTGGTCGTAGAGCTCTTTGCTCCGAGTTCGCCAAGA 2585
Query 2556 TCATGCAGCAGGGCTATGCGAATCTTCCGGCGGGAATATGTGTGTCGAGCATGGGCAGAC 2615
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2586 TCATGCAGCAGGGATATGCGAATCTTCCGGCAGGAATATGTGTGTCGAGCATGGGCAGAC 2645
Query 2616 CGGTTTCGTATGAGCAAGCGACGGTGTGGAAAGTTGTCGACGACAACGAATCAAACCACT 2675
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 2646 CGGTTTCGTATGAGCAAGCGACGGTGTGGAAAGTTGTTGATGACAACGAATCAAACCACT 2705
Query 2676 GCTTGGCTTTTATTCTCGTGAATTGGTCGTTCGTTTGATGAAGGGAAAAGGTTGGTTATG 2735
|||||||||||| ||||| | ||||||||| |||||||||||| |||||||||||||||
Sbjct 2706 GCTTGGCTTTTACCCTCGTTAGTTGGTCGTTTGTTTGATGAAGG-AAAAGGTTGGTTATG 2764
Query 2736 TTAGATATTAAA--TT------T-T-G-----G-CTAAGGTTTGTTAAATTAGAGGGTCC 2779
|||||||||||| || | | | | |||||||||||| |||||||| ||||
Sbjct 2765 TTAGATATTAAAAGTTAGGGGATGTTGTTTTTGGCTAAGGTTTGTTGAATTAGAGAGTCC 2824
Query 2780 ATAACTCAATATGTAATATGGAAAAATTATGA 2811
||||||| |||||||||||||||||||| |||
Sbjct 2825 ATAACTCTATATGTAATATGGAAAAATTCTGA 2856
Score = 65.8 bits (35), Expect = 2e-09
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Plus
Query 2804 AATTATGACATTATGTATGGCAAGATATTTATTTT 2838
|||||||||||||||||||||||||||||||||||
Sbjct 2874 AATTATGACATTATGTATGGCAAGATATTTATTTT 2908
> AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-leucine
zipper family protein / lipid-binding START domain-containing
protein | chr2:14639323-14644273 REVERSE LENGTH=3064
Length=3064
Score = 2446 bits (1324), Expect = 0.0
Identities = 2153/2550 (84%), Gaps = 69/2550 (3%)
Strand=Plus/Plus
Query 213 ACAGAGACTCTCCTGACAAAGGATTTGATTCCGGCAAGTACGTTAGATACACGCCGGAAC 272
||||||| || || || ||||| || |||||||||||||| || || ||||||||||| |
Sbjct 318 ACAGAGAGTCGCCGGATAAAGGGTTAGATTCCGGCAAGTATGTGAGGTACACGCCGGAGC 377
Query 273 AAGTTGAAGCTCTTGAGAGAGTTTATGCTGAGTGTCCTAAACCTAGCTCTCTCAGAAGAC 332
|||| |||||||| ||||||||||| ||||||||||||| || || ||||| |||||||
Sbjct 378 AAGTGGAAGCTCTCGAGAGAGTTTACACTGAGTGTCCTAAGCCAAGTTCTCTAAGAAGAC 437
Query 333 AACAGCTTATTCGTGAATGTCCGATTCTCTGTAACATCGAGCCTCGA-CAGATCAAAGTT 391
|||| || || ||||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct 438 AACAACTCATACGTGAATGTCCGATTCTCTCTAACATCGAGCCT-AAGCAGATCAAAGTT 496
Query 392 TGGTTCCAGAATCGCAGATGTCGAGAGAAGCAGAGGAAAG-AGTCAGCTCGTCTTCAGAC 450
||||| ||||| ||||||||||| |||||||||||||||| || | ||||||||||| ||
Sbjct 497 TGGTTTCAGAACCGCAGATGTCGTGAGAAGCAGAGGAAAGAAG-CTGCTCGTCTTCAAAC 555
Query 451 AGTGAACAGGAAGCTGAGTGCCATGAACAAGCTTTTGATGGAAGAGAATGATCGTTTGCA 510
||||||||| || || | |||||||||||| || ||||||||||||||||||||||||||
Sbjct 556 AGTGAACAGAAAACTCAATGCCATGAACAAACTCTTGATGGAAGAGAATGATCGTTTGCA 615
Query 511 GAAGCAAGTCTCCAACTTGGTTTATGAGAATGGGTTCATGAAACATCGAA-TCCACACTG 569
||||||||| || |||||||| ||||||||||| ||||||||||| || | |||||||
Sbjct 616 GAAGCAAGTTTCTAACTTGGTCTATGAGAATGGCCACATGAAACATC-AACTTCACACTG 674
Query 570 CTTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGATTGGTCAGCAACGTC 629
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 675 CTTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGCAACATC 734
Query 630 AGCAGCAAAACCCAACA-CATCAGCATCCA-CAGCGTGATGCTAACAACCCAGCTA--AT 685
| ||||||||||||| | | |||||||| | || |||||||||||||||||||| | |
Sbjct 735 AACAGCAAAACCCAA-ATCCTCAGCATC-AGCAACGTGATGCTAACAACCCAGC-AGGA- 790
Query 686 CTTCTCTCGATTGCGGAGGAGACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCT 745
|| || || || || |||||| || | || |||||||||| |||||||||||||||||||
Sbjct 791 CTCCTTTCTATAGCAGAGGAGGCCCTAGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCT 850
Query 746 GTCGACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTAGCT 805
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 851 GTTGACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATAGTCGCT 910
Query 806 GTTTCACGCAACTGCAGTGGAATAGCAGCACGTGCCTGCGGCCTCGTGAGTTTAGAACCC 865
|||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 911 ATTTCGCGCAACTGCAGCGGAATTGCAGCACGTGCCTGCGGCCTCGTGAGTTTAGAACCC 970
Query 866 ATGAAGGTCGTTGAAATCCTCAAAGATCGTCCATCTTGGTTCCGTGACTGTCGATGTGTC 925
|||||||| | |||||| ||||||||||||||||||||| |||| || |||||| ||||
Sbjct 971 ATGAAGGTTGCTGAAATTCTCAAAGATCGTCCATCTTGGCTCCGAGATTGTCGAAGTGTG 1030
Query 926 GAGACTCTGAATGTTATACCTACTGGAAATGGTGGTACTATTGAGCTTGTCAACACTCAG 985
|| ||||||| ||| |||||| ||||||| ||||| || || |||||| | |||| |||
Sbjct 1031 GATACTCTGAGTGTGATACCTGCTGGAAACGGTGGGACGATCGAGCTTATTTACACGCAG 1090
Query 986 ATTTATGCTCCTACAACATTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGTACA 1045
|| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1091 ATGTATGCTCCTACGACTTTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGCACA 1150
Query 1046 AGTCTAGAAGATGGAAGCTATGTGGTTTGTGAGAGGTCACTCACTTCTGCAACTGGTGGC 1105
|| | |||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 1151 TGTTTGGAAGATGGAAGCTATGTGGTTTGTGAAAGGTCGCTTACTTCTGCAACTGGTGGC 1210
Query 1106 CCCAATGGTCCGCTTTCTTCAAGCTTCGTGAGAGCCAAAATGCTGTCAAGCGGGTTTCTT 1165
|||| ||| || | |||||||| ||| |||||||| ||||| |||||||||||||
Sbjct 1211 CCCACTGGGCCACCTTCTTCAAACTTTGTGAGAGCTGAAATGAAACCAAGCGGGTTTCTC 1270
Query 1166 ATCCGTCCTTGTGATGGTGGTGGTTCCATTATCCACATCGTTGATCATGTTGACCTGGAT 1225
||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct 1271 ATCCGTCCTTGCGATGGTGGTGGTTCCATTCTCCACATTGTTGATCATGTTGATCTGGAT 1330
Query 1226 GTCTCAAGTGTTCCTGAAGTCCTGAGGCCTCTTTATGAGTCTTCCAAAATTCTTGCTCAG 1285
| || ||||| ||||||||| |||||||||| ||||| || || || ||||||||||||
Sbjct 1331 GCCTGGAGTGTCCCTGAAGTCATGAGGCCTCTCTATGAATCATCGAAGATTCTTGCTCAG 1390
Query 1286 AAAATGACCGTGGCTGCTTTGAGACATGTGAGGCAAATTGCTCAAGAGACTAGTGGAGAA 1345
|||||||| || ||||||||||||||||| || |||||||| ||||| || |||||||||
Sbjct 1391 AAAATGACTGTTGCTGCTTTGAGACATGTAAGACAAATTGCACAAGAAACAAGTGGAGAA 1450
Query 1346 GTCCAGTATAGTGGTGGAAGACAGCCTGCAGTTTTAAGAACTTTCAGCCAAAGACTCTGC 1405
|| |||||| |||| || | || ||||| ||||||||||| ||||| |||||||||||
Sbjct 1451 GTTCAGTATGGTGGAGGGCGCCAACCTGCGGTTTTAAGAACCTTCAGTCAAAGACTCTGT 1510
Query 1406 CGGGGTTTCAATGATGCTGTTAATGGTTTTGTTGATGATGGGTGGTCTCCAATGAGTAGT 1465
|||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||
Sbjct 1511 CGGGGTTTCAATGATGCTGTTAATGGTTTTGTGGATGATGGATGGTCACCAATGGGTAGC 1570
Query 1466 GATGGAGCAGAGGATATTACAATCATGATTAACTCT-TCCTCTGCTAAATTCGCTGGCTC 1524
||||| ||||||||| |||| | ||||| |||| | ||| ||| || || | ||| ||
Sbjct 1571 GATGGTGCAGAGGATGTTACTGTAATGATAAACT-TGTCCCCTGGGAAGTTTGGTGGGTC 1629
Query 1525 CCAATACGGTAGCTCATTTCTTCCAAGTTTTGGAAGTGGTGTCCTGTGTGCCAAAGCTTC 1584
|| ||||||| ||||| |||||||| ||||| ||||| || || |||||||| || ||
Sbjct 1630 TCAGTACGGTAATTCATTCCTTCCAAGCTTTGGTAGTGGCGTGCTTTGTGCCAAGGCATC 1689
Query 1585 TATGCTG-TTGCAGAATGTTCCACCC-CTTGTACTAATTCGTTTCCTGAGAGAACACCGA 1642
|||| || || ||||| ||||||||| || || || |||| ||||| ||||||||||||
Sbjct 1690 TATGTTGCTT-CAGAACGTTCCACCCGCT-GTGCTGGTTCGATTCCTTAGAGAACACCGA 1747
Query 1643 GCTGAATGGGCAGACTATGGTGTTGATGCCTATTCTGCTGCATCTCTCAGGGCAACTCCA 1702
|||||||||| || ||||| || ||||| ||| |||||||||| ||||| |||| |||
Sbjct 1748 TCTGAATGGGCTGATTATGGCGTGGATGCTTATGCTGCTGCATCGCTCAGAGCAAGTCCT 1807
Query 1703 TTCACTGTTCCATGCGTTAGAACCGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCTCTC 1762
|| ||||||| || | |||| | || |||||||| |||||||||||||||||||||||
Sbjct 1808 TTTGCTGTTCCTTGTGCTAGAGCTGGGGGGTTCCCAAGTAACCAAGTCATTCTTCCTCTT 1867
Query 1763 GCACAGACACTTGAACATGAAGAGTTTCTCGAAGTGGTCAGACTCGGAGGTCATGCTTAC 1822
|| |||||| ||||||||||||||| || || ||||| ||||| | |||||| ||||||
Sbjct 1868 GCGCAGACAGTTGAACATGAAGAGTCACTTGAGGTGGTTAGACTTGAAGGTCACGCTTAC 1927
Query 1823 TCACCCGAAGACATGGGTTTATCCCGGGATATGTATTTACTGCAGCTTTGCAGCGGCGTT 1882
||||||||||||||||||||| | |||||||||||||| || |||||||| ||||| |||
Sbjct 1928 TCACCCGAAGACATGGGTTTAGCTCGGGATATGTATTTGCTACAGCTTTGTAGCGGTGTT 1987
Query 1883 GATGAAAATGTGGTTGGAGGTTGTGCTCAGCTTGTCTTTGCCCCAATCGATGAATCATTT 1942
|||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct 1988 GATGAAAATGTGGTTGGAGGTTGTGCACAGCTTGTATTTGCCCCTATCGATGAATCATTT 2047
Query 1943 GCTGATGATGCACCTTTGCTTCCTTCTGGTTTCCGTGTCATACCGCTCGACCAGAAAACA 2002
|||||||||||||||||||||||||| |||||||| ||||||| || || |||||| |
Sbjct 2048 GCTGATGATGCACCTTTGCTTCCTTCCGGTTTCCGCATCATACCTCTTGAACAGAAATCT 2107
Query 2003 AATCCGAATGATCATCAGTCTGCAAGTCGAACACGGGATCTAGCATCATCTCTAGATGGT 2062
| |||||| | | || ||||||| || || | |||| |||| ||| || |||| ||
Sbjct 2108 ACTCCGAACGGTG--CA-TCTGCAAACCGTACCCTGGATTTAGCCTCAGCTTTAGAAGGA 2164
Query 2063 TCCAC--G--AA-------AA-CCGATTCAGAAA--CA--AACTCCAGATTGGT-CTTAA 2105
||||| | || || |||| || || | |||| || | ||| || ||
Sbjct 2165 TCCACACGTCAAGCTGGTGAAGCCGACCCA-AATGGCTGTAACTTTAGGTCGGTACT-AA 2222
Query 2106 CAATAGCCTTCCAGTTCACATTTGATAATCATTCAAGAGACAATGTTGCTACAATGGCGA 2165
| ||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||| |
Sbjct 2223 CCATAGCATTCCAGTTCACATTTGATAACCATTCAAGAGACAGTGTTGCTTCAATGGC-A 2281
Query 2166 -GACAGTATGTGAGGAATGT-T-GTTGGTTCGATTCAGAGAGTGGCTTTAGCCATTACGC 2222
| ||||| ||| | || | | || || ||||||||||| || ||| |||||||| | |
Sbjct 2282 CGTCAGTACGTGCG-AA-GCATAGTAGGATCGATTCAGAGGGTTGCTCTAGCCATTGCTC 2339
Query 2223 CTCGTCCTGGCTC-AAT----G-C-AA---CT-T-CCCACTTCCCCTGAAGCTCTCACCC 2270
||||||||||||| ||| | | || || | ||||||||||||||||||||||| |
Sbjct 2340 CTCGTCCTGGCTCCAATATCAGTCCAATATCTGTTCCCACTTCCCCTGAAGCTCTCACTC 2399
Query 2271 TTGTCCGTTGGATCACCCGTAGTTACAGCATTCACACAGGTGCTGACCTGTTTGGAGCTG 2330
| |||||||||||| |||| ||||||||| ||||||| ||||| || || |||||| |||
Sbjct 2400 TGGTCCGTTGGATCTCCCGGAGTTACAGCCTTCACACTGGTGCAGATCTCTTTGGATCTG 2459
Query 2331 ATTCTCAGTCCTGTGGAGGAGACACGTTGCTTAAGCAACTCTGGAACCATTCTGATGCCA 2390
||||||| || |||| | | ||||||||| | ||||||||||| || |||||||| |
Sbjct 2460 ATTCTCAAACCAGTGGTG-A--CACGTTGCTGCATCAACTCTGGAATCACTCTGATGCAA 2516
Query 2391 TATTGTGCTGCTCCCTCAAAACTAATGGATCACCGGTATTCACATTTGCAAACCAAGCCG 2450
| |||||||||||||||||||| || | |||||||| |||||||| ||||||||| |||
Sbjct 2517 TCTTGTGCTGCTCCCTCAAAACAAACGCTTCACCGGTTTTCACATTCGCAAACCAAACCG 2576
Query 2451 GTTTAGACATGCTTGAAACAACGCTCGTGGCACTTCAGGATATAATGCTCGACAAAACGC 2510
||||||||||||| ||||| || || || || ||||| || |||||||| ||||| || |
Sbjct 2577 GTTTAGACATGCTGGAAACGACTCTTGTAGCCCTTCAAGACATAATGCTAGACAAGACCC 2636
Query 2511 TTGATGA-CTCTGGTCGTAAAGCTCTTTGCTCCGAATTCGCCAAGATCATGCAGCAGGGC 2569
|||| || | |||||||||||||||||||||| || ||| ||||||||||||| ||||||
Sbjct 2637 TTGACGAAC-CTGGTCGTAAAGCTCTTTGCTCTGAGTTCCCCAAGATCATGCAACAGGGC 2695
Query 2570 TATGCGAATCTTCCGGCGGGAATATGTGTGTCGAGCATGGGCAG-ACCGGTTTCGTATGA 2628
||||| |||| ||||| ||| |||||| ||| |||||||| || | ||| || || ||
Sbjct 2696 TATGCTCATCTGCCGGCAGGAGTATGTGCGTCAAGCATGGGAAGGAT-GGTATCTTACGA 2754
Query 2629 GCAAGCGACGGTGTGGAAAGTTGTCGACGACAACGAATCAAACCACTGCTTGGCTTTTAT 2688
||| || ||||||||||||||| | || ||| | ||||||||||||||||| ||||| ||
Sbjct 2755 GCAGGCAACGGTGTGGAAAGTTCTTGAAGACGATGAATCAAACCACTGCTTAGCTTTCAT 2814
Query 2689 -TCTCGTGAATTGGTCGTTCGTTTGATGAA 2717
| ||||||||||||||||||||||| |||
Sbjct 2815 GT-TCGTGAATTGGTCGTTCGTTTGAAGAA 2843
> AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8
| chr4:15863452-15868625 REVERSE LENGTH=3023
Length=3023
Score = 289 bits (156), Expect = 1e-76
Identities = 610/819 (74%), Gaps = 72/819 (9%)
Strand=Plus/Plus
Query 244 CGGCAAGTACGTTAGATACACGCCGGAACAAGTTGAAGCTCTTGAGAGAGTTTATGCTGA 303
||| |||||||| || ||||| || |||||||| |||||||| |||||| | || |||
Sbjct 425 CGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTACAATGA 484
Query 304 GTGTCCTAAACCTAGCTCTCT-CAGAAGACAACAGCTTATTCGTGAATGTCCGATTCTCT 362
||||||||||| |||||| | | | | |||||||| || || |||||||| || ||||
Sbjct 485 CTGTCCTAAACCGAGCTCTATGC-GCCGCCAACAGCTAATCCGCGAATGTCCTATCCTCT 543
Query 363 GTAACATCGAGCCTCGACAGATCAAAGTTTGGTTCCAGAATCGCAGATGTCGAGAGAAGC 422
|||||||||||| |||||| ||||| ||||||||||| ||||| ||| |||| || |
Sbjct 544 CCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAAAAAC 603
Query 423 AGAGGAAAGAGTCAG-CTCGTCTTC-AGACAGTGAACAGGAAGCTGA-GTGCCATGAACA 479
|| | |||||| | | | || |||| || | ||||| |||||||| | | || |||||||
Sbjct 604 AGCGAAAAGAGGC-GTCACGACTTCAAG-CTGTGAATAGGAAGCTAACG-GCAATGAACA 660
Query 480 AGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCAAGTCTC-CAACTTGGTTTATGAG 538
|||||||||||||||||||||| || ||||| |||||||| || || |||||||||||||
Sbjct 661 AGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCA-CTTGGTTTATGAG 719
Query 539 AATGGGT-TCAT-GA-AACATCG--AATCCACACTGC--TTCTGGGACGACCACAGACAA 591
|| | | | | | |||||| || | || | || ||| | |||||||| |
Sbjct 720 AACAGCTATTTTCGCCAACATCCTCAAAAC-CAGGGGAATT-TGG--CTACCACAGATA- 774
Query 592 C-AGCTGTGAGTCTGTGGTCGT-GATTGGTCAGCAACGTCAGCA-GCAAAACC-CAACAC 647
| ||||||||||| ||||| | || |||||| || | || | | | || |||||
Sbjct 775 CTAGCTGTGAGTCAGTGGT-GACGAGTGGTCAACA-C--CA-CTTG-ACC-CCTCAACA- 826
Query 648 ATCAGCATCCACAGCGTGATGCTAACAACCCAGCTA-ATC-TTCTCTCGATTGCGGAGGA 705
||||| || | |||||||| || ||| || || || | |||||||| ||
Sbjct 827 -TCAGCCTC----G--TGATGCTAGT--CCT-GCTGGATTATTGTC-C-ATTGCGGATGA 874
Query 706 GACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTCGACTGGGTTCAGATGAT 765
|| || | |||||| ||| |||||| || ||||| |||||||| ||||| || |||
Sbjct 875 AACTTTAACAGAGTTCATTTCCAAGGCGACTGGAACCGCTGTCGAGTGGGTCCAAATGCC 934
Query 766 TGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTAGCTGTTTCAC--GCAACTGCA-G 822
|||||||||||||||||||||||| || || ||||| ||| |||| | | | |||| |
Sbjct 935 TGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCATGGA--TGCACG 992
Query 823 TGGAATAGCAGCACGTGCCTGCGGCCTCGTGAGT-TTAGAACCCATGAAGG-TCGTTGAA 880
||||| || || ||||| |||||||| ||| || || || |||| |||| ||| ||
Sbjct 993 -GGAATCGCTGCTCGTGCTTGCGGCCTTGTGGGTCTT-GATCCCAC-AAGGGTCGCGGAG 1049
Query 881 ATCCTCAAAG-ATC-GTCCATCTTGGTTCCGTGACTGTC-GATGTGTCGAGACTC-TGAA 936
||||| |||| || | || | |||||| ||||| || | ||| | | || | | | ||
Sbjct 1050 ATCCT-AAAGGATAAG-CCTTGTTGGTTGCGTGATTG-CAGATCTCTGGATA-TAGTTAA 1105
Query 937 TGT--TATACCTACTGGAAATGGTGGTACTATTGAGCTTGTCAACACT-CAGATTTATGC 993
|| ||| || |||| ||||||||| || |||| || || ||| | ||| |||||||
Sbjct 1106 CGTACTAT-CC-ACTGCAAATGGTGGAACCCTTGAACTAATCTACA-TGCAGCTTTATGC 1162
Query 994 TCCTACAACATTAGCAGCAGCTCGTGACTTTTGGACGCT 1032
|| |||||| | ||| ||||||||||||| |||| |||
Sbjct 1163 GCCGACAACACTGGCACCAGCTCGTGACTTCTGGATGCT 1201
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141019276773
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5