BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473289
Length=2804
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30600.1 | Symbols: | Subtilase family protein | chr1:10841... 4364 0.0
> AT1G30600.1 | Symbols: | Subtilase family protein | chr1:10841142-10845050
REVERSE LENGTH=2842
Length=2842
Score = 4364 bits (2363), Expect = 0.0
Identities = 2666/2813 (95%), Gaps = 18/2813 (1%)
Strand=Plus/Plus
Query 1 ctctctctttctctttcctctgtcttcttctgagattacgtttctctactctacttcCAT 60
|||||||||||||||||| || ||||||||||||| |||| |||||||||| ||| ||||
Sbjct 16 CTCTCTCTTTCTCTTTCCCCTTTCTTCTTCTGAGA-TACGCTTCTCTACTCCACTGCCAT 74
Query 61 GGAGCTCTAATGGGTCTCTGCAATTTCCATTCTTTTCCTCTTTTCTTCTGAGAATTTCAG 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 75 GGAGCTCTAATGGGTCTCTGCAATTTTCATTCTTTTCCTCTTTTCTTCTGAGAATTTCAG 134
Query 121 CTCAAGAACCATGGAGGAGTCTTCTCTTGTTCGTTTTGTGTTCCTGCTCTGTTTGGTTTC 180
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 135 CTCAAGAACCATGGATGAGTCTTCTCTTGTTCGTTTTGTGTTCCTTCTCTGTTTGGTTTC 194
Query 181 GTCGTCTGTGTTCTGTTTGGATGAGTCTGACCAAAACCCAACCACGTCTTCCGCTGTTTA 240
|||||||||||||||||||| |||||||||||||||| ||||| ||||| ||||||||
Sbjct 195 GTCGTCTGTGTTCTGTTTGGCTGAGTCTGACCAAAACGCAACCGTTTCTTCTGCTGTTTA 254
Query 241 CATAGTTACTCTCAAGGACCGTCCAT-TAGTTCATTTCTCCGGCAGAGAATCGAGTGACT 299
||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 255 CATTGTTACTCTCAAGGACCGTCCATCT-GTTCATTTCTCCGGCAGAGAATCGAGTGACT 313
Query 300 CCAAACAC-GTCCTTACCGCTACTTCATCCCAAATTTACAGAACATTGAACAGAAGTGCT 358
| |||||| | ||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 314 CTAAACACAG-CCTTACCGCTACTTCGTCCCAAATTTACAGAACATTGAACCGAAGTGCT 372
Query 359 TCTATCATTAGAGTTCACGATTCTTTGCTGAGAAAAGTATTGAGAAAGGAGAATTATCTT 418
||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 373 TCTATTATTAGAGTTCACGATTCATTGCTGAGAAATGTATTGAGAAAGGAGAATTACCTT 432
Query 419 AAGCTGTACAGTTACCACTATCTCATCAATGGGTTTTCCGCGGTTCTTACTCGAAAGCAG 478
||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 433 AAGCTTTATAGTTACCACTATCTTATCAATGGGTTTTCCGCGGTTCTTACTCGAAAACAG 492
Query 479 GCTGATAGACTTGCGGCTAGAGAAGAAGTGGACAATGTGGTTTTGGATTTTCCGGTTGAG 538
|||||||||||||| ||||||||||||||||| ||||||||| |||| |||| ||| |||
Sbjct 493 GCTGATAGACTTGCAGCTAGAGAAGAAGTGGAAAATGTGGTTCTGGACTTTCTGGTCGAG 552
Query 539 AAAGCAACTACTCACACACCGCAGTTCTTAGGTTTGCCTCGTGGAGCTTGGCTCCGTGAT 598
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 553 AAAGCAACTACTCACACACCACAGTTCTTAGGTTTGCCTCGTGGAGCTTGGCTCCGTGAT 612
Query 599 GGAGGCTCTGAATATGCAGGAGAAGGAGTTGTTATAGGGTTTATTGATACTGGAATTGAT 658
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 613 GGAGGCTCTGAATATGCAGGAGAAGGAGTTGTTATAGGCTTTATTGATACTGGAATTGAT 672
Query 659 CCCACTCATTCTAGTTTTAGTGACAAAATCCCGGGGCATACATATTCGATCCCTCCTCGG 718
||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct 673 CCCACTCATCCTAGTTTCAGTGACAAAATCTCGGGGCATACATATTCGGTCCCTCCTCAC 732
Query 719 TTTACTGGCGTCTGCGAAGTTACCATTGGTTTCCCGCCCGGTTCTTGCAATAGGAAGCTC 778
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 733 TTTACTGGCGTCTGTGAAGTTACCATTGGTTTCCCGCCCGGTTCTTGCAATAGGAAACTC 792
Query 779 ATTGGAGCACGCCATTTTGCTGAGTCTGCTCTCAGTAGAGGAGTCTTGAATTCATCTCAG 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 ATTGGAGCACGCCATTTTGCTGAGTCTGCTCTCAGTAGAGGAGTCTTGAATTCATCTCAG 852
Query 839 GACGATGCTTCGCCATTTGATGGTGAAGGGCATGGCACGCACACAGCTTCTGTTGCAGCT 898
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 GATGATGCTTCACCATTTGATGGTGAAGGGCATGGCACGCACACAGCTTCTGTTGCAGCT 912
Query 899 GGGAATCACGGGATCCCGGTGGTAGTTGCCGGTCATCACCTTGGAAATGCTAGCGGGATG 958
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 913 GGGAATCACGGGATCCCGGTGGTAGTTGCGGGTCATCGCCTTGGAAATGCTAGCGGGATG 972
Query 959 GCTCCTCGTGCTCATATTGCTGTTTACAAGGCATTGTATAAGAGGTTTGGAGGTTTTGCA 1018
||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 973 GCTCCTCGTGCTCATATTGCTATCTACAAGGCATTGTATAAGAGGTTTGGAGGCTTTGCT 1032
Query 1019 GCAGATATCATTGCAGCCATAGATCAGGCGGCTCAAGATGGAGTTGACATAATAAACTTA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GCAGATATCATTGCAGCCATAGATCAGGCGGCTCAAGATGGAGTTGACATAATAAACTTA 1092
Query 1079 TCAATCACACCAAATAGACGTCCTCCTGGTATTGCTACGTTCTTCAACCCGATCGATATG 1138
|||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct 1093 TCAATCACACCAAATAGACGTCCTCCTGGTATCGCTACGTTCTTTAACCCAATCGATATG 1152
Query 1139 GCATTGCTTTCAGCTGTGAAAGCAGGGATCTTTGTAGTGCAAGCAGCTGGAAACACAGGA 1198
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1153 GCATTGCTTTCAGCTGTGAAAGCCGGGATCTTTGTAGTGCAAGCAGCTGGAAACACAGGA 1212
Query 1199 CCAGCTCCTAAGAGCATGTCTTCCTTTAGTCCATGGATCTTCACAGTAGGAGCTACATCT 1258
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1213 CCAGCTCCTAAGAGCATGTCTTCCTTCAGTCCATGGATCTTCACAGTAGGAGCTACATCT 1272
Query 1259 CATGATAGAGTATATAGTAACTCGATAATCCTCGGAAATAATGTCACTATTCCTGGAGTT 1318
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1273 CATGATAGAGTATATAGTAACTCGATAATCCTCGGAAATAATGTCACTATTCCTGGTGTT 1332
Query 1319 GGACTCGCATCTGGTACAAGAACAATGCACAAACTTGTTTTAGCTACACATGCGCTCCGC 1378
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||
Sbjct 1333 GGACTCGCATCTGGTACAAGAATAATGCATAAACTTGTTTTAGCTACACATGCGCTTCGC 1392
Query 1379 AATGGTACAACCATTATGGATGCTATATATGTTGGGGAATGCCAAGATTCAAGTAGCTTT 1438
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 AATGGTACAACTGTTATGGATGCTATATATGTTGGGGAATGCCAAGATTCAAGTAGCTTC 1452
Query 1439 GATGAGAAGCTGGTGCATGGAAAGATCCTTGTCTGTAGCTATACAGTTCGGTTCATCCTC 1498
||| ||||||||||||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct 1453 GATCAGAAGCTGGTGCAAGGAAAGATCCTTGTCTGTAGTTATACAGTACGATTCATTCTC 1512
Query 1499 GGTGTCTCAACCATCAAACAAGCCTTAATAACAGCTAAGAACTTAACAGCAGCAGGCCTT 1558
||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 1513 GGTGTCTCAACCATCAAACAAGCATTACTTACAGCTAAGAACTTAACAGCAGCAGGCCTT 1572
Query 1559 GTCTTCTATATAGATCCTTCAGCCACCGGTTTTCAGATGACTTCAACTCCGATGGATATA 1618
|||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct 1573 GTCTTCTATATAGATCCTTCTGCCACCGGTTTTCAGATGACTTCAAGTCCAATGGATATA 1632
Query 1619 CCGGGAATTTTAATCTCCTCCCCTCAATATTCTCAGGCTTTACTCCGGTATTACAATTCT 1678
||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1633 CCGGGAATTCTAATATCCTCCCCCCAAGATTCTCAGGCTTTACTCCGGTATTACAATTCT 1692
Query 1679 TCTCTGTTGAGGGAAAATGGTTCAGGCAAAATAGTTGGGTCTGCATCAGTTGCTAGAATT 1738
|||||||||||||||||||||||||| || || ||||||||||| || ||||||| ||||
Sbjct 1693 TCTCTGTTGAGGGAAAATGGTTCAGGGAAGATTGTTGGGTCTGCGTCTGTTGCTAAAATT 1752
Query 1739 GTTGGTGGCATGAAGCCTACCTATGGCATTACTGCTCCCAAGGTCATGTATTTCTCTGCT 1798
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1753 GTTGGTGGCATGAGGCCTACCTATGGCATTACAGCTCCCAAGGTCATGTATTTCTCTGCT 1812
Query 1799 AGAGGACCTGACCCAGAAGATGATTCTTTCGTTGATGCTGATATAATGAAACCCAACTTA 1858
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1813 AGGGGACCTGACCCAGAAGATGATTCTTTCGTTGATGCTGATATAATGAAACCCAACTTA 1872
Query 1859 GTAGCTCCCGGAAATGCGATATGGGGCGCTTGGAGTCCTCTTGCCATTGGTACAACCGAT 1918
|||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct 1873 GTAGCTCCCGGAAACGCGATATGGGGAGCTTGGAGTCCTCTTGGCATTGGTACAAATGAT 1932
Query 1919 TTTCAAGGTGAACGATTTGCAATGGAATCGGGGACAAGCATGTCTGCTCCACATGTAAC- 1977
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1933 TTTCAAGGTGAACGTTTTGCGATGGAATCGGGGACAAGCATGTCTGCTCCACATGTAACC 1992
Query 1978 GGGTATTGCGGCTCTCATCAAGCAAAAGTTCCCACATTTCACTCCTGCAGCCATTGCATC 2037
||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1993 GGG-ATTGCGGCGCTCATCAAGCAGAAGTTCCCACATTTCACTCCTGCAGCCATTGCATC 2051
Query 2038 CGCACTTTCAACAACAGCTTCTTTATCAGACAGAAAGGGTGAGCATATAATGGCACAACG 2097
||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 2052 CGCACTTTCAACAACGGCTTCTCTATCAGACAGAAAGGGTGAGCATATAATGGCGCAACG 2111
Query 2098 CACTGTCTTAAACCCCGACATTAGTCAGTCTCCTGCAACACC-TTTCGATATGGGTAGCG 2156
|||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 2112 CACTGTCTTAAACCCCGACATTAGTCAGTCCCCTGCAACACCGTTT-GATATGGGTAGCG 2170
Query 2157 GATTCGTCAATGCAACTGCAGCTCTTGACCCTGGTTTGATTTTCGACATAGGTTACAATG 2216
|||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2171 GATTTGTTAATGCAACTGCAGCTCTTGACCCTGGTTTGATTTTTGACATAGGTTACAATG 2230
Query 2217 AATACATGAAGTTTCTCTGTAGCATCAACGGATCATCTCCAGTTGTTCTCAACTTCACCG 2276
|||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||
Sbjct 2231 AATACATGAAGTTTCTCTGTGGTATCAACGGATCATCTCCAGTCGTTCTCAACTACACCG 2290
Query 2277 GTGAAAGCTGCTCGGCGTACAACTCCTCCCTTGCAGCCTCTGACTTGAACCTACCCTCAG 2336
|||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2291 GTGAAAGCTGCTCGTCATACAACTCTTCCCTTGCAGCCTCTGACTTGAACCTACCCTCAG 2350
Query 2337 TCACAATAGCTAAACTAGTTGGTACTCGAACTGTACTAAGATGGGTGACTAATATCGCAA 2396
|||||||||||||||| ||||| |||||| | || |||||||||||||||||||||||||
Sbjct 2351 TCACAATAGCTAAACTCGTTGGGACTCGAGCCGTCCTAAGATGGGTGACTAATATCGCAA 2410
Query 2397 CCACGGCTACAAACGAAACATATACAGTCGGGTGGATGGCACCTGACTCAGTCTCGGTTA 2456
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 2411 CCACGGCTACAAACGAAACATATATAGTCGGGTGGATGGCACCGGACTCAGTCTCGGTTA 2470
Query 2457 AGGTCTCACCTGCCAAGTTTACAATCGGAAACGGGCAGACACGGGTCTTGAGTCTTGTCT 2516
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2471 AGGTCTCACCTGCCAAGTTTACAATAGGAAACGGGCAGACACGGGTCTTGAGCCTTGTCT 2530
Query 2517 TTCGAGCGATGAAGAATGTTTCGATAGCGAGTTTTGGGAGAATTGGGCTGTTTGGAGATA 2576
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 2531 TTCGAGCGATGAAGAATGTTTCGATGGCTAGTTTTGGGAGAATTGGACTGTTTGGAGATA 2590
Query 2577 GAGGTCACATTGTTAACATTCCAGTGGCAGTCATCTACAAGATTGCTGTCTGAAAAA-TA 2635
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2591 GAGGTCACGTTGTTAACATTCCAGTGGCAGTCATCTACAAGATTGCTGTCTGAAAAAATA 2650
Query 2636 GGTTTGTTATACGCAGAG-TTTTAGTGTGATGATGAAACAAACTTGAGAGAGTT-AT-AA 2692
||||||||| | |||||| |||| ||||||||||||||||||||| || ||||| || ||
Sbjct 2651 GGTTTGTTACATGCAGAGGTTTTTGTGTGATGATGAAACAAACTTAAGGGAGTTGATCAA 2710
Query 2693 ATTCTTTTCCtttttttGGGGTTAGTTAATGAATGTTTTTGTGCATTGCTTAAAAAGCTT 2752
|||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct 2711 ATTCTTTTTCTTTTTTTGGGGTTAGTTA-T-A-TGTTTTTGTGCATTGCTTAAAAAGCTT 2767
Query 2753 TAGAGAGATTTGTAGTTTGTAAATG-TGTTTGGAATGATGAAGTTGATTGAAT 2804
||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 2768 TAGAGAGATTTGTAGTTTGTAAATGCT-TTTGGAATGATGAAGTTGATTGAAT 2819
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139313600711
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5