BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473316
Length=2460
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30820.1 | Symbols: | CTP synthase family protein | chr1:10... 3679 0.0
AT2G34890.1 | Symbols: | CTP synthase family protein | chr2:14... 1531 0.0
AT3G12670.1 | Symbols: emb2742 | CTP synthase family protein | ... 870 0.0
> AT1G30820.1 | Symbols: | CTP synthase family protein | chr1:10944913-10949458
REVERSE LENGTH=2480
Length=2480
Score = 3679 bits (1992), Expect = 0.0
Identities = 2306/2451 (94%), Gaps = 48/2451 (2%)
Strand=Plus/Plus
Query 27 TGTTTCTCTCTT-CCCTTTATAAAACCGCTTCCGTCGTCAATGGCGTGAACCTAAAC--- 82
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 46 TGTTTCTCTCTTCCCCTTTATAAAACCGCTTCCGTCGTCAATGGCGTGAGCCTAAACAAG 105
Query 83 Taa-aaaaaCCAttcttctctcttttcatttttttcattctctctctctcttctccatcg 141
|| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 106 AAAGAAAAACCATTCTTCTCTCTTTTCGTTTTTTTCATTCTCTCTCTCTCTACTCCATCG 165
Query 142 ttttcacacttctctcGCCGCCCTTTATCCTTATCCGATAAACCCATCAAAACCCACAAA 201
||||||||||| ||||||||||||||||||||||||| || |||||||||||
Sbjct 166 TTTTCACACTTTTCTCGCCGCCCTTTATCCTTATCCG--------AT--AAACCCACAAA 215
Query 202 TAAAAACAGACTC-TTTGTTCTTTAAACAGAGATTGAAAATCCAGAGTCACCGGAATATA 260
|||| |||||||| |||||||||||||||||||||| |||||||||| | |||||| |||
Sbjct 216 TAAAGACAGACTCTTTTGTTCTTTAAACAGAGATTGTAAATCCAGAGCCGCCGGAAAATA 275
Query 261 CAACCGCCGG-TTACTCTCAGGTCTCTCTTTCACTCTCTGGTTTTCGA--TT-AAAAT-A 315
|||||||||| ||||||||||| | | || | | | | ||||| || ||||| |
Sbjct 276 CAACCGCCGGTTTACTCTCAGG-AT-TAGTTGA---TAT--TATTCGATTTTAAAAATCA 328
Query 316 -TCA--AAGAAGATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAA 372
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 GT-AGGAAGAAGATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAA 387
Query 373 GGAGTAACAGCAAGTAGTATTGGTGTTCTTCTTAAAGCTTGTGGTCTTCGAGTTACTTCT 432
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 388 GGAGTAACAGCAAGTAGTATTGGTGTTCTCCTTAAAGCTTGTGGTCTTCGAGTTACTTCT 447
Query 433 ATCAAAATCGATCCTTATCTTAACACTGATGCTGGAACCATGTCTCCATTTGAACACGGT 492
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 448 ATCAAAATCGATCCTTATCTGAACACTGATGCTGGAACTATGTCTCCATTTGAACACGGT 507
Query 493 GAAGTTTTTGTCTTGGACGATGGTGGTGAGGTGGATCTTGATCTTGGAAATTACGAAAGG 552
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 508 GAAGTTTTTGTCTTGGACGATGGTGGTGAGGTGGATCTTGATCTTGGAAACTACGAAAGG 567
Query 553 TTTCTGGATATAAAATTAACCAGAGACAATAACATCACTACTGGGAAAATTTACCAGCAT 612
||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 568 TTTCTAGATATCAAATTAACAAGAGACAATAACATCACTACTGGGAAAATTTATCAGCAT 627
Query 613 GTTATTGCTAAAGAGAGGAAAGGAGATTATTTGGGAAAGACTGTTCAGGTTGTTCCTCAT 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 GTTATTGCTAAAGAGAGGAAAGGAGATTATTTGGGAAAGACTGTTCAGGTTGTTCCTCAT 687
Query 673 GTCACTGATGCAATTCAAGATTGGATTGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAG 732
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 688 GTCACTGATGCAATTCAAGATTGGATCGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAA 747
Query 733 GAGGGTCCTGCTGATGTTTGTGTTATTGAATTAGGTGGAACTATAGGTGATATTGAATCC 792
|||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 748 GAGGATCCTGCTGATGTTTGCGTTATTGAATTAGGTGGAACAATAGGTGATATTGAATCC 807
Query 793 GCGCCTTTTATTGAGGCGCTTGGCCAATTCTCTTACCGTGTAGGCCCAGGGAATTTCTGT 852
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 808 GCGCCTTTTATCGAGGCGCTTGGTCAATTCTCTTACCGTGTAGGCCCAGGGAATTTCTGT 867
Query 853 CTGGTCCATGTCAGCCTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCC 912
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 CTGGTCCATGTCAGCCTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCG 927
Query 913 ACACAGCATAGTGTCAAGGGGCTACGAGGCTTGGGCTTGACGCCGGATATCTTAGCTTGC 972
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 928 ACACAGCATAGTGTCAAGGGGCTACGAGGATTGGGCTTGACGCCGGATATCTTAGCTTGT 987
Query 973 AGGAGCACAAAGGCACTTGAAGATAATGTGAAAGAAAAACTAGCTCAATTTTGCCATGTC 1032
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 988 AGGAGCACAAAGCCACTTGAAGATAATGTGAAAGAAAAACTAGCTCAGTTTTGCCATGTC 1047
Query 1033 CCGCTTGAGTATATTTTCACTCTCTATGATGTTCCCAACATTTGGCATATTCCTTTGTTG 1092
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1048 CCGCTTGAGTATATCTTCACTCTCTATGATGTTCCCAACATTTGGCGTATTCCTTTGTTG 1107
Query 1093 CTAAAGGATCAGAAAGCTCATCTGGTAATCTCAAAAGTGCTCAATCTTGCTAGTATTCTT 1152
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1108 CTAAAGGATCAGAAAGCTCATCTGGCAATCTCAAAAGTGCTCAATCTTGCTAGTATTCTT 1167
Query 1153 AATGAGCCTTCTCTTGGGGAATGGACTTCCAGAGCTGAACTATGTGACAATTTACATGTG 1212
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1168 AATGAGCCTTCTCTAGGGGAATGGACTTCCAGAGCTGAATTATGTGACAATTTACATGTG 1227
Query 1213 CCGGTGAGAATTGCTGTTGTGGGGAAATATACAGGCCTCTCTGATGCTTATCTCTCTGTC 1272
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 CCGGTGAGAATCGCTGTTGTGGGGAAATATACAGGCCTCTCTGATGCTTATCTCTCTGTC 1287
Query 1273 TTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGTAGTTGATTGGGTT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 TTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGTAGTTGATTGGGTT 1347
Query 1333 CCAGCTTGTGATCTCGAAAAAGAAACTGAGAAAGAGAATCCAGATGCGTATAAAGCTGCT 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 CCAGCTTGTGATCTCGAAAAAGAAACTGAGAAAGAGAATCCAGATGCGTATAAAGCTGCT 1407
Query 1393 TGGAAGTTGCTAAAGGGGGTAGATGGAGTTCTTGTCCCTGGAGGTTTTGGTGATAGGGGA 1452
||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||
Sbjct 1408 TGGAAGTTGCTAAAGGGTGTAGATGGAATTCTTGTACCTGGAGGTTTTGGTGATAGAGGA 1467
Query 1453 GTGGAAGGGAAGATTCTTGCTGCAAAATATGCCCGTGAAAACAAAATCCCTTTCCTCGGT 1512
|||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1468 GTGGAAGGGAAGATTCTTGCTGCAAAGTATGCACGTGAAAACAAAATCCCGTTCCTCGGT 1527
Query 1513 ATTTGTCTCGGGATGCAGATTGCTGTCATCGAGTTTGCACGATCAGTTCTCTGCTTGCAC 1572
|||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1528 ATTTGTCTTGGAATGCAGATTGCTGTCATCGAGTTTGCACGATCAGTTCTAAGCTTGCAA 1587
Query 1573 GACGCAAACAGCACAGAATTTAAACCTGAAACGAAACATCCGTGTATCATTTTCATGCCC 1632
||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||
Sbjct 1588 GACGCAAACAGCACAGAATTTAACCCTGAAACCAAACATCCTTGCATCATTTTCATGCCC 1647
Query 1633 GAGGGTTCGAGAACTCATATGGGAGGCACTATGCGCTTAGGATCAAGAAAATCCTTCTTT 1692
|||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1648 GAGGGTTCTAAAACTCATATGGGAGGCACTATGCGCTTAGGATCAAGAAAATCCATCTTC 1707
Query 1693 AATGTCAAAGACAGCAAATCCGCAAAACTATACGGGAACAAAAACTTTGTCGATGAGAGG 1752
|||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||
Sbjct 1708 AATGTCAAAGACAGCAAATCTGCAAAACTATACGAGAACAAAAGCTTTGTAGATGAGAGG 1767
Query 1753 CATCGTCACAGATATGAGGTGAATCCTGATATGGTTGAACGCCTTGAGAAGGCCGGTCTT 1812
|||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1768 CATCGTCACAGATACGAGGTGAATCCGGACATGGTTGAACGCCTTGAGAAGGCCGGTCTT 1827
Query 1813 TCTTTCGCTGCGAAAGATGAAACTGGCAAACGCATGGAGATCATTGAACTACCAAACCAT 1872
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1828 TCTTTCGCTGCGAAAGATGAAACTGGCAAACGCATGGAGATCATTGAACTTCCAAACCAT 1887
Query 1873 CCTTTCTTTATCGGTGCTCAATTCCACCCCGAGTTCAAATCCAGACCCGGGAAAGCGTCT 1932
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1888 CCTTTCTTTATCGGTGCTCAATTCCACCCCGAGTTCAAATCCAGACCCGGGAAAGCTTCT 1947
Query 1933 CCTCTGTTTTTAGGACTCATTGCAGCATCGTGTGGCGAGCTAGACACAGTCCTGAATCCA 1992
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1948 CCTCTGTTTTTAGGGCTCATTGCAGCATCGTGTGGCGAGTTAGACACAGTCCTGAATCCA 2007
Query 1993 GCATCTGCTCATCAACAT-CTGATTAGCAACGGTCCAAAAAACGTTTACGTCAATGGAAC 2051
|| ||||||||||||||| | |||||| |||||||||| |||| ||| | ||||||||||
Sbjct 2008 GCTTCTGCTCATCAACATTC-GATTAGTAACGGTCCAACAAACATTTTCATCAATGGAAC 2066
Query 2052 TCCCAAGAAATCTCCCAATGGCTTGGCTGATGTAAGATATAATAACGGCTACTGCAATGG 2111
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 TTCCAAGAAATCTCCCAATGGCTTGGCTGATGTAAGATATAATAACGGCTACTGCAATGG 2126
Query 2112 CCTCTACACTAGATAGCTGCATTTGCTGATTTCTCCCTCTTTCCCTCTCCTTTAAAATTA 2171
||||||||||||||||||||||||||||| |||||||||| || | | | |||||
Sbjct 2127 CCTCTACACTAGATAGCTGCATTTGCTGAATTCTCCCTCT--CCAT-T-----AGAATTA 2178
Query 2172 TTGCTTTGTTTTCGATTTAGTTTGGATTTTGGTTTGCTTTCTTCTTAATAATCTTAGGAT 2231
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2179 TTGCTTTGTGTTCGATTTAGTTTGGATTTTGGTTTGCTTTCTTCTTAATAATCTTAGGAT 2238
Query 2232 TTTTCCTCTGTACATATGATCCAAGCTTTTGTTCAGttttttt-AGACTCTTTTAACAGA 2290
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 2239 TTTTCCTCTGTACATATGATCCAAGCTTTTGCTCAGTTTTTTTTAGACTCTTTTAACAGA 2298
Query 2291 CTTATGTTCTGAAAAGACTCTAGAAACGTCTGAAAATGGCGGTTTGATTCCCCTGCTTTG 2350
|||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct 2299 CTTATGATCTGGAAAGACTCTAGAAACGTTTGAAAATGGCGGTTTGATTCCCCTGGTTCG 2358
Query 2351 tttttttttAC-ATCAAAAGGGATTTCATATGATCATATGTACCGGTGGAACATTTTGTA 2409
||||||||| | | ||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct 2359 TTTTTTTTTTCCACCAAAAGGGATTTCATATGATCTTATGTACCGTTGGAACATTTTACA 2418
Query 2410 TCTC--GATTTGGTCTGAAGGTG-AACGAAGCATTTGATAAATAAAACTTT 2457
|||| ||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct 2419 TCTCTCGATTTGGTCTGAATGTGTAA-GAAGCATTTGATAAATAAAACTTT 2468
Score = 52.8 bits (28), Expect = 2e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1 GAGAGAGGCGCTTCTCTGCTGCAAATTG 28
||||||||||||||||||||||||||||
Sbjct 9 GAGAGAGGCGCTTCTCTGCTGCAAATTG 36
> AT2G34890.1 | Symbols: | CTP synthase family protein | chr2:14718195-14721271
REVERSE LENGTH=1794
Length=1794
Score = 1531 bits (829), Expect = 0.0
Identities = 1412/1692 (83%), Gaps = 46/1692 (3%)
Strand=Plus/Plus
Query 325 ATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAGTAACAGCA 384
||||||||||| ||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct 1 ATGAAGTACGTACTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAATCACTGCA 60
Query 385 AGTAGTATTGGTGTTCTTCTTAAAG-CTTGTGGTCTTCGAGTTACTTCTATCAAAATCGA 443
|| ||| ||||||| |||||| | | ||||||||||||| ||||||| ||||||||||||
Sbjct 61 AGCAGTGTTGGTGTCCTTCTTCA-GTCTTGTGGTCTTCGCGTTACTTGTATCAAAATCGA 119
Query 444 TCCTTATCTT-AAC-ACTGATGCTGGAACCATGTCTCCATTT-GAACACGGTGAAGTTTT 500
||| ||| || ||| | ||||||||||||||| || || || ||||| || ||||| ||
Sbjct 120 TCCGTAT-TTGAACTA-TGATGCTGGAACCATATCCCC-TTACGAACATGGAGAAGTGTT 176
Query 501 TGTCTTGGACGATGGTGGTGAGGTGGATCTTGATCTTGGAAATTACGAAAGGTTTCTGGA 560
|||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 177 TGTCTTGGACGATGGTAGTGAGGTGGATCTTGATCTTGGAAACTACGAGAGGTTTCTAGA 236
Query 561 TATAAAATTAAC-CAGAGACAATAACATCACT-ACTGGGAAAATTTACCAGCATGTTATT 618
|| || |||||| | |||| || || |||||| || ||||| ||| | | | |||| ||
Sbjct 237 TACAACATTAACTC-GAGATAACAATATCACTTAC-GGGAAGATTCAGCGGTATGTGATG 294
Query 619 GCTAAAGAGAGGAAAGGAGATTATTT-GGGAAAGACTGTTCAGGTTGTTCCTCATGTCAC 677
| |||||||||||||||||||| || ||| || ||||||||| |||||||||| |||||
Sbjct 295 GAGAAAGAGAGGAAAGGAGATTACTTAGGGGAA-ACTGTTCAGATTGTTCCTCACGTCAC 353
Query 678 TGATGCAATTCAAGATTGGATTGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAGGAGGG 737
|||| |||| | ||| ||| | ||||||||||| | |||||||| |||||| | || ||
Sbjct 354 TGATACAATCCGAGAATGGGTGGAGAGAGTTGCAATGATTCCTGTCGATGGAAAAGAAGG 413
Query 738 TCCTGCTGATGTTTGTGTTATTGAATTAGGTGGAACTATAGGTGATATTGAATCC-GCGC 796
|||| |||||||||| | ||||| ||||||||||||||||| |||| ||||||| | ||
Sbjct 414 TCCTCCTGATGTTTGCATCATTGAGTTAGGTGGAACTATAGGAGATAATGAATCCAG-GC 472
Query 797 CTTTTATTGAGGCGCTTGGCCAATTCTCTTACCGTGTAGGCCCAGGGAATTTCTGTCTGG 856
||||| ||| || ||| ||||||| || ||| ||||||||| | |||||||||||||
Sbjct 473 CTTTTGCTGACGCACTTAGCCAATTATCATACAGTGTAGGCCGTGAGAATTTCTGTCTGA 532
Query 857 TCCATGTCAGCCTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCCACAC 916
||||||||| ||||||||||||||| | ||||||||||||||||||||| || || ||||
Sbjct 533 TCCATGTCACCCTCGTGCCTGTGCTCAGTGTTGTTGGTGAACAGAAAACAAAACCAACAC 592
Query 917 AGCATAGTGTCAAGGGGCTACGAGGCTTGGGCTTGACGCCGGATATCTTAGCTTG-CAGG 975
|||| ||| | || | ||||||||||| || ||||| || ||||| ||||||| | ||
Sbjct 593 AGCACAGTATTAAAGATCTACGAGGCTTTGGTTTGACACCTAATATCATAGCTTGTC-GG 651
Query 976 AGCACAAAGGCACTTGAAGATAATGTGAAAGAAAAACTAGCTCAATTTTGCCATGTCCCG 1035
|||||||||||||||||||| ||||| |||| ||| ||| ||| |||||| |||| |||
Sbjct 652 AGCACAAAGGCACTTGAAGAGAATGTAAAAGCAAAGCTATCTCGGTTTTGCTATGTTCCG 711
Query 1036 CTTGAGTATATTTTCACTCTCTATGATGTTCCCAACATTTGGCATATTCCTTTGTTGCTA 1095
|| || | || ||| |||||| ||||||||||||||| ||||| |||||| |||||||
Sbjct 712 ATTCAGAACATCTTCTCTCTCTGTGATGTTCCCAACATCTGGCACATTCCTCTGTTGCTC 771
Query 1096 AAGGATCAGAAAGCTCATCTGGTAATCTCAAAAGTGCTCAATCTTGCTAGTATT-CTTAA 1154
||||| ||||| |||||| | ||| |||||||| || || ||| || ||||| || ||
Sbjct 772 AAGGAGCAGAAGGCTCATGAAGCAATTTCAAAAGTCCTGAACCTTTCTGGTATTGCTAAA 831
Query 1155 TGAGCCTTCTCTTGGGGAA-TGGACTTCCA-GAGCT-GAACT-ATGTGACAATTTACATG 1210
|| |||||| || | ||| ||| | || | | | | ||| | | ||||| |||| |||
Sbjct 832 -GAACCTTCT-TTAGAGAAATGGGCATCAATG-G-TAGAAATTA-GTGACGGTTTAAATG 886
Query 1211 TGCCGGTGAGAATTGCTGTTGTGGGGAAATATACAGGCCTCTCTGATGCTTATCTCTCTG 1270
| || |||||||| ||| | |||||||||||||||| || || ||||| ||||||||||
Sbjct 887 TACCCGTGAGAATCGCTATCGTGGGGAAATATACAGATCTATCAGATGCCTATCTCTCTG 946
Query 1271 TCTTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGTAGTTGAT-TGG 1329
|||| ||||| ||| | |||||||||||||||| || ||||||||| | ||||||| |||
Sbjct 947 TCTTGAAGGCCCTCCTCCATGCTTCTGTGGCTTTTCACAAAAAGCTTGAAGTTGATATGG 1006
Query 1330 GTTCCAGCTTGTGATCTCGAAAAAGA--AACTGA-GAAAGAGAATCCA-GATGCGTATAA 1385
||||| | |||||||||||||| || || || | ||||| || || | || ||| |
Sbjct 1007 -TTCCATCGTGTGATCTCGAAAA-GACCAA--GAAGCAAGAGGATTCACGC-GCATATGA 1061
Query 1386 AGCTGCTTGGAAGTTGCTAAAGGGGGTAGATGGAGTTCTTGTCCCTGGAGGTTTTGGTGA 1445
|||||||||||||| || |||| | | ||||||||||| |||||||||| ||||||||
Sbjct 1062 GGCTGCTTGGAAGTTACTGAAGGACGCAAATGGAGTTCTTCTCCCTGGAGGGTTTGGTGA 1121
Query 1446 TAGGGGAGTGGAAGGGAAGATTCTTGCTGCAAAATATGCCCGTGAAAACAAAATCCCTTT 1505
|||||||||||| |||| ||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 1122 TAGGGGAGTGGAGGGGATGATTCTTGCAGCAAAATATGCCCGAGAAAACAATATCCCTTT 1181
Query 1506 CCTCGGTATTTGTCTCGGGATGCAGATTGCTGTCATCGAGTTTGCACGATCAGTTCTCTG 1565
||||||||| ||||||||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct 1182 CCTCGGTATCTGTCTCGGGATGCAGATCGCTGTCATCGAGTTTGCACGCTCACTTCTCTG 1241
Query 1566 CTTGCAC-GACGCAAACAGCACAGAATTTAAACCTGAAACGAAACATCCGTGTATCATTT 1624
||||| | || ||||| |||||||| ||| |||||||||| |||||||| || ||||| |
Sbjct 1242 CTTGC-CTGATGCAAATAGCACAGAGTTTGAACCTGAAACCAAACATCCATGCATCATAT 1300
Query 1625 TCATGCCCGAGGGTTCGAGAACTCATATGGGAGGCACTATGCGCTTAGGATCAAGAAAAT 1684
||||||| ||||| || | |||||||||||||||||| ||||| ||||| || |||| |
Sbjct 1301 TCATGCCTGAGGGCTCCATAACTCATATGGGAGGCACAATGCGATTAGGTTCGAGAAGAG 1360
Query 1685 CCTTCTTTA-ATGTCAAAGACAGCAAATCCGCAAAACTATACGGGAACAAAAACTTTGTC 1743
||| ||| ||| ||| || |||||||| |||| |||||| ||||||||| | ||||||
Sbjct 1361 CCTA-TTTCCATGACAAGGAAAGCAAATCTGCAAGACTATATGGGAACAAAGAGTTTGTC 1419
Query 1744 GATGAGAGGCATCGTCACAGATATGAGGTGAATCCTGATATGGTTG-AACGCCTTGAGA- 1801
||||| |||||||| || |||||||||||||||||||||||||||| || ||||||| |
Sbjct 1420 GATGAAAGGCATCGCCATAGATATGAGGTGAATCCTGATATGGTTGCAA-GCCTTGA-AC 1477
Query 1802 AGGCCGGTCTTTCTTTCGCTGCGAAAGATGAAACTGGCAAACGCATGGAGATCATTGAAC 1861
|||| ||||| ||||| ||||| |||||||||||||| | ||||||||||| ||||||
Sbjct 1478 AGGCTGGTCTCTCTTTTGCTGCAAAAGATGAAACTGGGGAGCGCATGGAGATTGTTGAAC 1537
Query 1862 TACCAAACCATCCTTTCTTTATCGGTGCTCAATTCCACCCCGAGTTCAAATCCAGACCCG 1921
| |||| ||| |||||||| |||||||||||||| || ||||||| |||||| ||||||
Sbjct 1538 TTCCAAGCCACCCTTTCTTCATCGGTGCTCAATTTCATCCCGAGTACAAATCGAGACCCA 1597
Query 1922 GGAAAGCGTCTCCTCTGTTTTTAGGACTCATTGCAGCATCGTGTGGCGAGCTAGACACAG 1981
|||||| ||||||||||| |||||||| || |||||||| ||||| |||||||| |||
Sbjct 1598 GGAAAGTATCTCCTCTGTTCTTAGGACTAATAGCAGCATCCTGTGGTGAGCTAGATGCAG 1657
Query 1982 TCCTGAATCCAG 1993
||||||||||||
Sbjct 1658 TCCTGAATCCAG 1669
> AT3G12670.1 | Symbols: emb2742 | CTP synthase family protein
| chr3:4020120-4024268 REVERSE LENGTH=2056
Length=2056
Score = 870 bits (471), Expect = 0.0
Identities = 1299/1689 (77%), Gaps = 95/1689 (6%)
Strand=Plus/Plus
Query 325 ATGAAGTACGTGCTT-GTAACAGGAGGTGTTGTGAGTGGAT-TAGGGAAAGGAGTAACAG 382
||||||||||| || || |||||||| || |||||||| | | || ||||| || || |
Sbjct 50 ATGAAGTACGT-TTTGGTGACAGGAGGAGTGGTGAGTGG-TCTTGGCAAAGGTGTCACTG 107
Query 383 CAAGTAGTATTGGTGTTCTTCTTAAAGCTTGTGGTCTTCGAGTTACTTCTATCAAAATCG 442
| ||||| ||||| |||| ||| |||| ||||||||||| || ||||| || ||||| |
Sbjct 108 CTAGTAGCATTGGACTTCTCCTTCAAGCATGTGGTCTTCGTGTCACTTCCATTAAAATTG 167
Query 443 ATCCTTATCTTAACACTGATGCTGGAACCATGTCTCCATTTGAACACGGTGAAGTTTTTG 502
|||||||||||||||||||||||||||| |||||||| ||||| || || ||||| ||||
Sbjct 168 ATCCTTATCTTAACACTGATGCTGGAACAATGTCTCCGTTTGAGCATGGAGAAGTATTTG 227
Query 503 TCTTGGACGATGGTGGTGAGGTGGATCTTG-ATCTTGGAAATTACGAAAGGTTTCTGGAT 561
| ||||| |||||||| ||||||||| ||| | |||||||| || ||| | ||| | ||
Sbjct 228 TATTGGATGATGGTGGAGAGGTGGAT-TTGGACCTTGGAAACTATGAACGATTTTTAGAC 286
Query 562 A-TAAAATTAACCAGAGACAATAACATCACTACTGGGAAA-ATTTACCAG-CATGTTATT 618
| || | || ||| | ||||| || || |||||||| ||| || |||||| || ||||||
Sbjct 287 AGTACA-TTGACCCGTGACAACAATATAACTACTGG-AAAGATATACCAGTCA-GTTATT 343
Query 619 G-CTAAAGAGAGGAAAGGAGATTATTTGGGAAAGA-CTGTTCAGGTTGTTCCTCATGTCA 676
| | || || ||||| || || || | |||| || |||| ||||||||||||||||| |
Sbjct 344 GAC-AAGGAAAGGAAGGGGGACTACCTCGGAA-GAACTGTACAGGTTGTTCCTCATGTTA 401
Query 677 CTGATGCAATTCAAGATTGGATTGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAGGAGG 736
|||| ||||| ||||| ||||||||| | || || | ||||||| |||||| |||| |
Sbjct 402 CTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAATGTTCCTGTGGATGGAAAGGAAG 461
Query 737 GTCCTGCTGATGTTTGTGTTATTGAATTAGGTGGAACTATAGGTGATATTGAATCCGCGC 796
||||| ||||||||||||| || |||||||| || |||||||||||||||||||| ||
Sbjct 462 GTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACTATAGGTGATATTGAATCTATGC 521
Query 797 CTTTTATTGAGGCGCTTGGCCAATTCTC-T-TACCGTGTAGGCCCAGGGAATTTCTGTCT 854
| ||||||||||| ||||| |||||||| | || || | || || || |||||||| ||
Sbjct 522 CCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGT-T-GGACCTGGTAATTTCTG-CT 578
Query 855 -GGTCCATGTCAGCCTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCCA 913
||| ||||||||||| |||||||| || | |||||||||||||||||| || ||||| |
Sbjct 579 TGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGAAGACGAAGCCAA 638
Query 914 CACAGCATAGTGT-CAAGGGGCT-ACGAGGCTTGGGCTTGACGCCGGATATCTTAGCTTG 971
| ||||||||||| | ||| || | ||| ||||| ||||| || ||||| |||| ||
Sbjct 639 CCCAGCATAGTGTGCGAGGC-CTCAGGAGCCTTGGT-TTGACACCAAATATCCTAGCATG 696
Query 972 -CAGGAGCACAAAGGCACTTGAAGATAATGTGAAAGA-AAAACTAGCTCAATTTTGCCAT 1029
| | ||||| |||||||||||||| ||||| || || ||||||| ||||||||||||||
Sbjct 697 TC-GCAGCACGAAGGCACTTGAAGAAAATGTCAA-GACAAAACTATCTCAATTTTGCCAT 754
Query 1030 GTCCCGCTTGAGTATATTTTCACTCTCTATGATGTTCCCAACATTTGGCATATTCCTTTG 1089
|| ||| | | |||| | || |||||||||||||| || |||||||| ||||| ||
Sbjct 755 GTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATTTGGCACGTTCCTCTG 814
Query 1090 -TTGCTAAAGGATCAGAAAGCTCATCTGGTAATCTCAAA-AGTGCTCAATCTTGCTAGTA 1147
|| ||| |||||| ||||||||| | ||| | || || | | |||||| ||||
Sbjct 815 CTTT-TAAGGGATCAAAAAGCTCATGAAGCGATC-CTAAGAGAGTTAAATCTT---AGTA 869
Query 1148 TT-CT-TAATGAGCCTTCTCTTGGG-GAATGGACTTCCAG-AGCTGAACTATGTGACA-A 1202
| || ||| ||||| |||| ||||||||| | || | || || | | ||||| |
Sbjct 870 ATGCTATAA--AGCCTGA-CTTGACAGAATGGACTGCAAGGA-CTAAAATTTATGACACA 925
Query 1203 TTTACATGTGCCGGTGAGAATTGCTGTTGTGGGGAAA-TATACAGGCCTCT-CTGATGCT 1260
| || | || |||||||| ||| | || || ||| || || ||||| | ||||| ||
Sbjct 926 CTG-CAAGACCCTGTGAGAATAGCTATGGTTGG-AAAGTACACTGGCCT-TACTGATTCT 982
Query 1261 TATCTCTCTGTCTTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGT- 1319
|| || || || || ||||| || || ||||||||||| || |||| ||| ||||| ||
Sbjct 983 TACCTTTCCGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTTGTC 1042
Query 1320 AGTTGATTGGGTTCCAGCTTGTGATCTCGAAAAAGA-AACTG-AGAAAGAGAATCCAGAT 1377
| | || |||||| ||||| |||| || ||| | || ||||| | || |||| ||||||
Sbjct 1043 A-TAGAGTGGGTTGCAGCTAGTGACCTTGAAGA-GATAACTGCACAA-GAGACGCCAGAT 1099
Query 1378 G-CGTATAAAGCTGCTTGGAAG-TTGCTAAAGGGGG-TAGATGG-AGTTCTTGTCCCTGG 1433
| | |||| ||||| ||| | || | ||||| | | ||||| | | || || || ||
Sbjct 1100 GTCC-ATAAGGCTGCATGGGATCTTT-TGAAGGGTGCT-GATGGTA-TCCTAGTACCAGG 1155
Query 1434 AGGTTTTGGTGATAGGGGAGTGGAAGGGAAGATTCTTGCTGCAAAATATGCCCGTGAAAA 1493
||| ||||||||||| |||||| |||||||||| |||||| |||| || |||||||||||
Sbjct 1156 AGGGTTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAA 1215
Query 1494 -CAAAATCCCTTTCCTCGGTATTTGTCTCGGGA-TGCAGATTGCTGTCATCGAGTTTGCA 1551
||| |||||||||| || || || || |||| ||||| | ||||| | || |||||
Sbjct 1216 TCAAG-TCCCTTTCCTTGGCATATGCCT-GGGAATGCAGCTGGCTGTTGTTGAATTTGCC 1273
Query 1552 CGATC-AGTTCTCTGCTTG-CACGACGCAAACAGCACAGAATTTAAACCTGAAACGAAAC 1609
|| || | |||| || || ||||| |||||||||||||| ||| |||| ||||| |
Sbjct 1274 CGCTCCA-TTCT-TGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCA- 1330
Query 1610 ATCCGT-GTATCAT-TTTCATGCCCGAGGGTTCGAGAACTCATATGGGAGGCACTATGCG 1667
| || | | ||||| ||| ||||| || || || | |||||||||||| ||||| |||||
Sbjct 1331 AGCCCTTGCATCATATTT-ATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCG 1389
Query 1668 CTTAGGATCAAGAAA-ATCCTT-CTTTAATGTCAAAGACAGCAAATCCGCAAAACTATAC 1725
|||||| ||||| || | | || ||| | || || |||| || || || || |||
Sbjct 1390 CTTAGGGTCAAGGAAGA-C-TTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTGTAC 1447
Query 1726 GGGAACAAAAACTTTGTCGATGAGAGGCATC-GTCACAGATATGAGGTGAATCCTGATAT 1784
|| || ||| ||||| |||||| | || | | |||||||||||||| ||||| |||||
Sbjct 1448 GGTAATGCAAAGTTTGTAGATGAGCGACA-CAGGCACAGATATGAGGTAAATCCAGATAT 1506
Query 1785 GGT-T--GAACGCCTTGAGAAGGCCGGTCTTTC-TTTCGCTGCGAAAGATGAAACTGG-C 1839
| | | ||| |||||||||| || || || ||| | || ||||||||| ||||| |
Sbjct 1507 GATATCAGAAA---TTGAGAAGGCTGGCCTCTCCTTT-GTTGGGAAAGATGAGACTGGGC 1562
Query 1840 AAACGCATGGAGATCATTGAACTACCAAACCATCCTTTCTTTATCGGTGCTCAATTCCAC 1899
|| |||||||| |||||||||||| ||||| | |||| | |||||||| |||||
Sbjct 1563 GT-CGTATGGAGATTGTTGAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCAT 1621
Query 1900 CCCGAGTTCAAATCCAGACCCGGGAAAGCGTCTCC-TCTGTTTTTAGGACTCATTGCAGC 1958
|| || ||||| |||||||| |||||| | ||| | | ||||| |||| || || |||||
Sbjct 1622 CCTGAATTCAAGTCCAGACCTGGGAAACCTTCTGCAT-TGTTTCTAGGTCTTATCGCAGC 1680
Query 1959 ATCGTGTGG 1967
| ||| |||
Sbjct 1681 AGCGTCTGG 1689
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122056172319
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5