BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473336 Length=829 Score E Sequences producing significant alignments: (Bits) Value AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 455 3e-127 AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 449 2e-125 AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 444 7e-124 AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 438 3e-122 AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 429 2e-119 AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 425 3e-118 AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 416 2e-115 AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 405 3e-112 AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 340 1e-92 AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 296 2e-79 AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 291 1e-77 AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 291 1e-77 AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 291 1e-77 AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 279 2e-74 AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 211 8e-54 AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 130 2e-29 AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 86.1 5e-16 AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 80.5 2e-14 AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 80.5 2e-14 AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 75.0 1e-12 AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 75.0 1e-12 AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 75.0 1e-12 AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 75.0 1e-12 AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 75.0 1e-12 AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 6e-10 > AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230 FORWARD LENGTH=1057 Length=1057 Score = 455 bits (246), Expect = 3e-127 Identities = 281/298 (94%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||| ||||| |||||||| |||||||| Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866 Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748 Score = 102 bits (55), Expect = 5e-21 Identities = 94/111 (85%), Gaps = 9/111 (8%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||| Sbjct 841 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 782 Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470 |||||| ||| || | | |||||| ||| ||||||| ||||||||| Sbjct 781 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 731 > AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845 REVERSE LENGTH=1089 Length=1089 Score = 449 bits (243), Expect = 2e-125 Identities = 280/298 (94%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||| ||||| |||||||| |||||||| Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868 Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750 Score = 102 bits (55), Expect = 5e-21 Identities = 65/70 (93%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||| Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784 Query 429 CGGTCAACCG 438 |||||| ||| Sbjct 783 CGGTCACCCG 774 > AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681 FORWARD LENGTH=1059 Length=1059 Score = 444 bits (240), Expect = 7e-124 Identities = 279/298 (94%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| ||| Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||| ||||| |||||||| |||||||| Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868 Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750 Score = 102 bits (55), Expect = 5e-21 Identities = 94/111 (85%), Gaps = 9/111 (8%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||| Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784 Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470 |||||| ||| || | | |||||| ||| ||||||| ||||||||| Sbjct 783 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGTTGACTTGTG 733 > AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729 REVERSE LENGTH=1147 Length=1147 Score = 438 bits (237), Expect = 3e-122 Identities = 279/299 (93%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||| Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||| ||||| |||||||| |||||||| Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928 Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868 Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 || ||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810 Score = 97.1 bits (52), Expect = 2e-19 Identities = 94/112 (84%), Gaps = 11/112 (10%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGTGT 427 ||||||||||||||||||||||||||||||||| || || ||||||||||| | |||||| Sbjct 903 GTGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGTGT 845 Query 428 ACGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470 ||||||| ||| || | | |||||| ||| ||||||| ||||||||| Sbjct 844 ACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 793 > AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113 REVERSE LENGTH=1061 Length=1061 Score = 429 bits (232), Expect = 2e-119 Identities = 276/297 (93%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 3 ATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62 ||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||| Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987 Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTGTA 122 |||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||| Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927 Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 181 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868 Query 182 TAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808 Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297 |||||||||||| | |||||||||||||||| || ||| ||| |||||||||| ||| Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752 Score = 274 bits (148), Expect = 1e-72 Identities = 323/399 (81%), Gaps = 46/399 (12%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| Sbjct 565 GATCGAGGGTACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506 Query 530 CATCTTCGTT-TTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCG 588 ||||||||| |||| ||| | ||| ||||||||||||||||||||| |||||||||||| Sbjct 505 TATCTTCGTTGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 450 Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648 ||||||||||||||||||||||||||| |||| ||||||||| || | ||||||||||| Sbjct 449 TCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACACACGG 390 Query 649 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGA--- 694 | | | | || ||||||| | ||||||| || | | ||||||||||| ||||| Sbjct 389 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACGG 332 Query 695 ----AA-GA----GACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C- 742 || || |||||||||| ||| | ||||| || ||||||||||||||| | Sbjct 331 TTGTAATGAAAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACG 272 Query 743 -AT----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTG 791 || |||| |||||||||| | ||||||||||||| | ||||| |||||| Sbjct 271 TATCCAACCCCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACTA 212 Query 792 ACATCTTTCCCGGCATCCAGTAACTAATTAT-TGGATTG 829 |||||||||||| |||| ||||||||||||| || |||| Sbjct 211 ACATCTTTCCCGACATCGAGTAACTAATTATGTG-ATTG 174 Score = 102 bits (55), Expect = 5e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||| Sbjct 845 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 786 Query 429 CGGTCAACCGAGT 441 |||||| || ||| Sbjct 785 CGGTCACCCAAGT 773 > AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046 REVERSE LENGTH=1043 Length=1043 Score = 425 bits (230), Expect = 3e-118 Identities = 271/291 (93%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||| ||| Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 ||||| |||||||||||||| || |||||||||||| |||||||||||||| ||||||| Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851 Query 181 TTAAAAACACTC-TCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 850 TTAAAAATACTCCTC-AATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290 | |||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741 Score = 113 bits (61), Expect = 2e-24 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428 ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct 827 GTGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGTGTA 768 Query 429 CGGTCAACCGAGT 441 |||||| |||||| Sbjct 767 CGGTCACCCGAGT 755 > AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908 REVERSE LENGTH=1058 Length=1058 Score = 416 bits (225), Expect = 2e-115 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 ||||||||||||||||||| | |||| |||||||| ||||| |||||||| ||||||| Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866 Query 181 TTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240 |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806 Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 |||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749 Score = 89.8 bits (48), Expect = 4e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429 ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCACAACTGGTGTAC 782 Query 430 GGTCAACCG 438 ||||| ||| Sbjct 781 GGTCACCCG 773 > AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093 REVERSE LENGTH=1068 Length=1068 Score = 405 bits (219), Expect = 3e-112 Identities = 272/298 (91%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||| ||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876 Query 181 TTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||| ||| ||||| |||| || ||||||||||||||||||||||||||| || Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | ||||||||| || | |||||||||||||||||| |||||||| ||||||||| ||| Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759 > AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123 FORWARD LENGTH=870 Length=870 Score = 340 bits (184), Expect = 1e-92 Identities = 226/246 (92%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 54 ATGCCATGGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACG 113 ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811 Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172 ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752 Query 173 TTCTGTTCTTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTT 231 ||||||| ||||||||||| ||| ||||| ||||||||||||| |||||||||||||||| Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693 Query 232 GACACGTACGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291 ||||| ||| |||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633 Query 292 CGCCAG 297 |||||| Sbjct 632 CGCCAG 627 Score = 322 bits (174), Expect = 3e-87 Identities = 319/384 (83%), Gaps = 30/384 (8%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 440 GATCGAGGGTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 381 Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCGT 589 |||||| ||| | | || |||| ||||||||||||||||||||||| ||||||||||||| Sbjct 380 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 324 Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649 ||||||||||||||| |||||||||| |||| ||||||||| |||| |||||||||||| Sbjct 323 CTTGCTCATCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACACGGT 264 Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGAAAGAG 699 | | | || ||||||| | |||||| |||| |||||||||||| ||||| | | Sbjct 263 CACTTTCAGCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGAC-G-G 207 Query 700 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--AT----------T 745 ||||||||| ||| | ||||| || ||||||||||||||| | || | Sbjct 206 ACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAACCCCACT 147 Query 746 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 805 ||| |||||||||| |||||| | |||||| | |||||||||||| |||||| ||| ||| Sbjct 146 TGACTGTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCCTGGC 87 Query 806 ATCCAGTAACTAATTATTGGATTG 829 ||||||||||||||||| |||||| Sbjct 86 ATCCAGTAACTAATTATGGGATTG 63 > AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965 REVERSE LENGTH=733 Length=733 Score = 296 bits (160), Expect = 2e-79 Identities = 317/387 (82%), Gaps = 34/387 (9%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494 Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCGT 589 |||||||||| | | || |||| ||||||||||||||||||||||| |||||||| |||| Sbjct 493 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACATCGT 437 Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649 |||||||||||||||||||||||||| |||| ||||||||| ||| ||| || | Sbjct 436 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 379 Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696 | | ||||||| | ||||||| |||| ||||| |||||| | | ||| || | Sbjct 378 ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGAAA 321 Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-ATC--ATT------- 745 |||||||||||| ||| | ||||| || ||||||||||| ||| | | ||| Sbjct 320 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCC 261 Query 746 --T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802 | || |||||||||| |||||| |||||||| | |||||||||||| |||||| |||| Sbjct 260 ACTTGACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 201 Query 803 GGCATCCAGTAACTAATTATTGGATTG 829 |||||||||||||||||||| |||||| Sbjct 200 GGCATCCAGTAACTAATTATGGGATTG 174 > AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473 REVERSE LENGTH=963 Length=963 Score = 291 bits (157), Expect = 1e-77 Identities = 317/388 (82%), Gaps = 36/388 (9%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494 Query 530 CATCTTCGTTTTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCG 588 |||||||||| ||| || |||| || | ||||||||||||||||||| |||||||||||| Sbjct 493 CATCTTCGTTATCC-CCATCCT-TT-T-CATCCTCATCTGTTTTATCGTCTTCAACGTCG 438 Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648 |||||||||| |||||||||||||||| |||| ||||||||| ||| ||| || | Sbjct 437 TCTTGCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC 379 Query 649 TAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA-A-- 696 | | ||||||| | ||||||| |||| ||||| ||||| | | ||| || | Sbjct 378 -ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATAAA 322 Query 697 -GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-ATC--ATT------ 745 |||||||||||| ||| | ||||| || ||||||||||| ||| | | ||| Sbjct 321 AGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCC 262 Query 746 ---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 801 | || |||||||||| ||||||||||||||| | |||||||||||| |||||| ||| Sbjct 261 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202 Query 802 CGGCATCCAGTAACTAATTATTGGATTG 829 ||||||||||||||||||||| |||||| Sbjct 201 CGGCATCCAGTAACTAATTATGGGATTG 174 > AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964 FORWARD LENGTH=759 Length=759 Score = 291 bits (157), Expect = 1e-77 Identities = 322/395 (82%), Gaps = 38/395 (10%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428 Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCGT 589 || |||||| ||| |||||||||| |||||||| ||||||||| |||||| |||||| Sbjct 427 GATATTCGTTGTCCCCCTCCTCTTC---ATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371 Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649 |||||||||||||||||||||||||| |||| ||||||||| |||| |||| ||||||| Sbjct 370 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGT 311 Query 650 AACTCTCA-C--CATC-----G-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG 693 |||| ||| | |||| | ||||||| |||| ||||| |||||| | | ||| Sbjct 310 AACTTTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTG 251 Query 694 -AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--AT 744 || | |||||||||||| ||| | ||||| || ||||||||| ||||| | || Sbjct 250 TAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTAT 191 Query 745 ----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACA 794 |||| |||||||||| ||||||||||||||| | |||||||||||| ||| Sbjct 190 CCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACA 131 Query 795 TCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829 ||| |||||||||||||||||||||||| |||||| Sbjct 130 TCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96 > AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727 FORWARD LENGTH=714 Length=714 Score = 291 bits (157), Expect = 1e-77 Identities = 316/387 (82%), Gaps = 34/387 (9%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 442 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 383 Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCGT 589 |||||||||| ||| |||||||||| |||||||||||||||||| ||||||||||||| Sbjct 382 CATCTTCGTTGTCCCCCTCCTCTTC---ATCCTCATCTGTTTTATCGTCTTCAACGTCGT 326 Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649 |||||||||||||||||||||||||| |||| ||||||||| ||| ||| || | Sbjct 325 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 268 Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696 | | ||| ||| | | ||||| |||| |||||| ||||| | | ||| || | Sbjct 267 ATCA-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGAAA 210 Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A---T---CA--T-- 744 |||||||||||| ||| | ||||| || ||||||||||| ||| | | || | Sbjct 209 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACTCC 150 Query 745 --TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802 |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| || Sbjct 149 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCTG 90 Query 803 GGCATCCAGTAACTAATTATTGGATTG 829 |||||||||||||||||||| |||||| Sbjct 89 GGCATCCAGTAACTAATTATGGGATTG 63 > AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130 REVERSE LENGTH=763 Length=763 Score = 279 bits (151), Expect = 2e-74 Identities = 314/387 (81%), Gaps = 34/387 (9%) Strand=Plus/Minus Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| Sbjct 554 GATCGAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCAC 495 Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCATCTTCAACGTCGT 589 |||||||||| ||| ||| | ||| ||||||||||||||||||||| ||||||| || || Sbjct 494 CATCTTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGT 438 Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649 |||||||||||||||||||||||||| |||| ||||||||| ||| ||| || | Sbjct 437 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 380 Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696 | | ||||||| | ||||||| |||| |||| ||||||| | | ||| || | Sbjct 379 ATCG-TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGAAA 322 Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--ATT------- 745 |||||||||||| ||| | ||||| || ||||||||| ||||| | ||| Sbjct 321 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACCCC 262 Query 746 --T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802 | || |||||||||| ||||||||||||||| | |||||||||||| |||||| |||| Sbjct 261 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 202 Query 803 GGCATCCAGTAACTAATTATTGGATTG 829 || ||||||||||||||||| |||||| Sbjct 201 GGAATCCAGTAACTAATTATGGGATTG 175 > AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581 FORWARD LENGTH=681 Length=681 Score = 211 bits (114), Expect = 8e-54 Identities = 167/191 (87%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||| |||||||||||||| ||||||| |||||||| |||||||| |||||||| || Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||| ||| || |||||||||||| |||| |||| || ||| Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATG----AC----CTTA 234 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGTT 179 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174 Query 180 CTTAAAAACAC 190 |||| |||||| Sbjct 173 CTTAGAAACAC 163 > AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486 FORWARD LENGTH=1011 Length=1011 Score = 130 bits (70), Expect = 2e-29 Identities = 78/82 (95%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168 ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185 Query 169 ACTTTTCTGTTCTTAAAAACAC 190 ||||||||||||||| |||||| Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163 > AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549 FORWARD LENGTH=2952 Length=2952 Score = 86.1 bits (46), Expect = 5e-16 Identities = 86/105 (82%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| |||| | |||| || | |||||||||||||||||||||||||| Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 790 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 ||||||||| || ||||| || | ||||||||| ||||||| Sbjct 789 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACTGTCAACC 747 Score = 71.3 bits (38), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 759 TGTACTGTCA 750 > AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995 REVERSE LENGTH=4305 Length=4305 Score = 80.5 bits (43), Expect = 2e-14 Identities = 85/105 (81%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 ||||||||| || ||||| || | ||||||||| ||||||| Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750 Score = 71.3 bits (38), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 > AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236 REVERSE LENGTH=2830 Length=2830 Score = 80.5 bits (43), Expect = 2e-14 Identities = 85/105 (81%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 ||||||||| || ||||| || | ||||||||| ||||||| Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750 Score = 71.3 bits (38), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 > AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827 FORWARD LENGTH=1065 Length=1065 Score = 75.0 bits (40), Expect = 1e-12 Identities = 85/106 (80%), Gaps = 6/106 (6%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACG-GTCAACC 437 ||||||||| || ||||| || | |||||||| | ||||||| Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTA-GTGTCAACC 750 Score = 69.4 bits (37), Expect = 5e-11 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238 ||||||||||||||||||||||||||||||||||||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784 > AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449 REVERSE LENGTH=2562 Length=2562 Score = 75.0 bits (40), Expect = 1e-12 Identities = 84/105 (80%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||| Sbjct 656 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAATGTACGTACATTGGTACAAACCATG 597 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 ||||||||| || ||||| || | ||||||||| ||||||| Sbjct 596 TTGACACGT-CGGGGATGGAG-CAGAGATTGGTGTACTGTCAACC 554 Score = 65.8 bits (35), Expect = 6e-10 Identities = 57/67 (85%), Gaps = 4/67 (6%) Strand=Plus/Minus Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262 |||||||||||||||||||||||||||||||||| || ||||| || | ||||||| Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564 Query 263 ACGGTCA 269 || |||| Sbjct 563 ACTGTCA 557 > AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701 REVERSE LENGTH=2829 Length=2829 Score = 75.0 bits (40), Expect = 1e-12 Identities = 85/106 (80%), Gaps = 6/106 (6%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACAT-TCTGTTGTGTACGTACATTGGTACAAACCAT 393 ||||||||| | ||| || | | ||| | || | ||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCAC-TGACTCTAGTGTACGTACATTGGTACAAACCAT 794 Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 |||||||||| || ||||| || | ||||||||| ||||||| Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750 Score = 71.3 bits (38), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 > AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913 FORWARD LENGTH=2709 Length=2709 Score = 75.0 bits (40), Expect = 1e-12 Identities = 84/105 (80%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 ||||||||| || | ||| || | ||||||||| ||||||| Sbjct 792 TTGACACGT-CGGGGATAGAG-CAGAGGTTGGTGTACAGTCAACC 750 Score = 69.4 bits (37), Expect = 5e-11 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238 ||||||||||||||||||||||||||||||||||||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784 > AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630 FORWARD LENGTH=2760 Length=2760 Score = 75.0 bits (40), Expect = 1e-12 Identities = 82/102 (80%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 338 TTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATGTTG 397 |||||| | ||| || | | |||| || | ||||||||||||||||||||||||||||| Sbjct 849 TTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATGTTG 790 Query 398 ACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437 |||||| || ||||| || | ||||||||| ||||||| Sbjct 789 ACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750 Score = 71.3 bits (38), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 > AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701 FORWARD LENGTH=1159 Length=1159 Score = 65.8 bits (35), Expect = 6e-10 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236 ||||||||||||||||||||||||||||||||||| Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785 Score = 63.9 bits (34), Expect = 2e-09 Identities = 57/68 (84%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 335 ACCTTCGCAGCCTGTAT-CTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCAT 393 ||||||||| | ||| | | | | |||| || | ||||||||||||||||||||||||| Sbjct 851 ACCTTCGCATCTTGTCTAC-TCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCAT 793 Query 394 GTTGACAC 401 |||||||| Sbjct 792 GTTGACAC 785 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40388254188 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5