BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473379 Length=1800 Score E Sequences producing significant alignments: (Bits) Value AT1G31910.1 | Symbols: | GHMP kinase family protein | chr1:114... 2900 0.0 > AT1G31910.1 | Symbols: | GHMP kinase family protein | chr1:11457126-11461825 FORWARD LENGTH=2345 Length=2345 Score = 2900 bits (1570), Expect = 0.0 Identities = 1736/1814 (96%), Gaps = 19/1814 (1%) Strand=Plus/Plus Query 1 CCGCCGGTCATTCACTGCCGCCGATTTCAAACTT-CCCGATCATTTCCGGCGATATCCAA 59 |||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| Sbjct 534 CCGCCGGTCATTTACTGCCGCCGATTTCAAA-TTATCCGATCATTTCCGGCGATATCCAA 592 Query 60 TCGCAGTCAGAGGTGAATCT-GGGCTTTGATCAGCGATTATC----T---TC---GGAAA 108 |||||| | ||||||||||| ||| ||||||||||||||||| | || | ||| Sbjct 593 TCGCAGACTGAGGTGAATCTGGGGTTTTGATCAGCGATTATCTTTGTCACTCTTTGAAAA 652 Query 109 TGGCTGTTGTTGCTTCTGCTCCTGGGAAGGTTTTGATGACTGGAGGCTACCTTGTACTCG 168 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 653 TGGCTGTTGTTGCTTCTGCTCCTGGGAAAGTTTTGATGACTGGAGGCTACCTTGTACTCG 712 Query 169 ATAAGCCAAATGCGGGGCTTGTGTTGAGTACAAATGCACGGTTCTACGCGATTGTGAAGC 228 | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 713 AGAAGCCAAATGCAGGGCTTGTGTTGAGTACAAATGCACGGTTTTACGCGATTGTGAAGC 772 Query 229 CGATCAATGAAGAAGTCAAGCCTGAAAGTTGGGCATGGCAATGGACAGATGTCAAATTAA 288 | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 773 CAATCAACGAAGAAGTCAAGCCTGAAAGTTGGGCATGGAAATGGACAGATGTCAAATTAA 832 Query 289 CATCACCACAGCTCTCGAGAGAAAGCATGTATAAACTGTCACTGAAACATTTGACTCTTC 348 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 833 CATCACCACAGCTCTCGAGAGAAAGCATGTATAAACTGTCACTGAATCATTTGACTCTTC 892 Query 349 AGTCTGTGTCTGCAAGTGATTCAAGAAACCCCTTTGTAGAGCATGCAATACAGTATGCTA 408 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 893 AGTCTGTGTCTGCAAGTGATTCAAGAAACCCCTTTGTAGAGCATGCGATACAGTATGCTA 952 Query 409 TAGCTGCTGCTCATTTGGCAACTGACAAGGACAAAGAAGCATTGCACAAACTCTTCTTGC 468 |||||||||||||||||||||| || |||||||||||| |||||||||||||||| |||| Sbjct 953 TAGCTGCTGCTCATTTGGCAACCGAGAAGGACAAAGAATCATTGCACAAACTCTTATTGC 1012 Query 469 AAGGTCTTGATATCACAATATTAGGCTCCAATGACTTTTACTCATATCGGAACCAGATAG 528 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 AAGGTCTTGATATAACAATATTAGGCTCCAATGACTTTTACTCATATCGGAACCAGATAG 1072 Query 529 AATC-GCTTGGGCTTCCATTGACACCAGAATCGCTGGGTACCCTTGCACCTTTTGCATCA 587 |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1073 AATCGGC-TGGGCTTCCATTGACACCAGAATCGCTGGGTACCCTTGCACCGTTTGCATCA 1131 Query 588 ATCACATTCAATGCTGCGGAGTCAAATGGTGCTAATTCCAAGCCTGAAGTAGCAAAAACT 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1132 ATCACATTCAATGCTGCGGAGTCAAATGGTGCTAATTCCAAGCCTGAAGTAGCAAAAACT 1191 Query 648 GGCTTAGGTTCTTCTGCAGCAATGACAACAGCTGTGGTTGCAGCTCTCTTACATTATCTT 707 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1192 GGCTTAGGTTCTTCTGCAGCAATGACAACAGCTGTGGTTGCAGCTCTGTTACATTATCTT 1251 Query 708 GGAGTTGTTGACCTATCTGATCCATGTAAAGAAGGAAATTTTGGTTGTTCTGATCTAGAT 767 ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 1252 GGAGTGGTTGACCTATCTGATCCATGTAAAGAAGGAAAGTTTGGCTGTTCTGATCTAGAT 1311 Query 768 GTTATCCATATGATAGCACAAACGTCTCATTGTCTTGCACAAGGGAAGGTCGGAAGTGGG 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1312 GTTATCCATATGATAGCACAAACGTCTCATTGTCTTGCACAAGGGAAGGTCGGAAGTGGG 1371 Query 828 TTCGATGTCAGCTGTGCTGTCTATGGGAGTCAGCGTTATGTTCGCTTCTCTCCAGAAGTC 887 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1372 TTTGATGTCAGCTGTGCTGTCTATGGAAGTCAGCGTTATGTTCGCTTCTCTCCAGAAGTC 1431 Query 888 TTGTCATTTGCTCAGGTTGCAGTAACAGGTCTGCCGTTAACTGAAGTTATTGGTACAATT 947 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 1432 TTGTCATTTGCTCAGGTTGCAGTAACAGGTCTGCCATTAAATGAAGTTATTGGTACAATT 1491 Query 948 TTGAAGGGGAAATGGGACCATGACAGAACTGAGTTCTCTTTACCACCACTGATGAATCTT 1007 |||||||| ||||||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 1492 TTGAAGGGAAAATGGGACAATAAGAGAACTGAGTTCTCTTTACCACCACTGATGAATCTT 1551 Query 1008 TTCCTTGGAGAACCTGGAAGTGGTGGATCCTCCACACCATCAATGGTAGGTGCTGTAAAG 1067 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1552 TTCCTTGGAGAACCTGGAAGTGGTGGATCCTCCACACCATCAATGGTAGGTGCAGTAAAG 1611 Query 1068 AAGTGGCAAATGTCTGATCCAGAGAAGGCACGAGAAAATTGGCAGAAGTTGTCAGATGCA 1127 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1612 AAGTGGCAAATGTCTGATCCAGAGAAGGCACGAGAAAACTGGCAGAATTTGTCAGATGCA 1671 Query 1128 AATTTAGAACTGGAAACTAAGCTAAACGTTCTGAGCAAATTAGCTAAAGACCACTGGGAT 1187 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1672 AATTTAGAACTGGAAACTAAGCTAAACGATCTGAGCAAATTAGCTAAAGACCACTGGGAT 1731 Query 1188 GTTTATCTAGGAGTCATTAAGTCTTGTAGTGTGCTTACTTCTGAAAAGTGGGTGCTACAT 1247 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1732 GTTTATCTACGAGTCATTAAGTCTTGTAGTGTGCTTACTTCTGAAAAGTGGGTGTTACAT 1791 Query 1248 GCTACTGAACCAATCAATGAAGCCATTATTAAAGAACTCTTAGAGGCAAGAGAAGCTATG 1307 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1792 GCTACTGAACCAATCAACGAAGCCATTATTAAAGAACTCTTAGAGGCAAGAGAAGCTATG 1851 Query 1308 TTGAGGATCAGAATTCTTATGCGCCAGATCGGTGAGGCTGCCAGTGTTCCGATAGAGCCT 1367 ||||||||||||||||||||||| ||||| |||||||| || || ||||||||||||||| Sbjct 1852 TTGAGGATCAGAATTCTTATGCGTCAGATGGGTGAGGCGGCTAGCGTTCCGATAGAGCCT 1911 Query 1368 GAATCTCAAACTCAACTTTTGGATTCTACAATGAATGCTGAAGGAGTTCTACTTGCTGGT 1427 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1912 GAATCTCAAACTCAACTTTTGGATTCTACAATGAGTGCTGAAGGAGTTCTACTTGCTGGT 1971 Query 1428 GTTCCTGGAGCTGGTGGATTTGATGCCATATTTGCAATCACTTTAGGTGATTCCGGCAGC 1487 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1972 GTTCCTGGAGCTGGTGGATTTGATGCCATATTTGCAATCACTTTAGGGGATTCCGGCACC 2031 Query 1488 AAACTGACCCAGGCATGGAGTTCGCACAATGTTTTGGCCTTGTTGGTGAGAGAAGATCCA 1547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2032 AAACTGACCCAGGCATGGAGTTCGCACAATGTTTTGGCCTTGTTGGTGAGAGAAGATCCA 2091 Query 1548 CACGGTGTTTGCCTAGAAAGTGGTGATCCACGCACCACAGGTATTACTTCAGGCGTTTCA 1607 || || |||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 2092 CATGGCGTTTGCCTAGAAAGTGGTGATCCACGAACCACATGTATTACTTCAGGCGTTTCA 2151 Query 1608 TCAATTCATCTTGAGTAAGCAACATTGTTTGGCAGTGTCCTATTATTAGGTGCATCACCA 1667 |||||||| ||||||||| ||||||||||| |||||||| |||||||||||| |||||| Sbjct 2152 TCAATTCACCTTGAGTAAACAACATTGTTT--CAGTGTCCAATTATTAGGTGCGTCACCA 2209 Query 1668 AGTTCGGATGAGTATACTGTTTTTCATATAGACTTGGGTGCTAAATTTCTTGGTGTAAGC 1727 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2210 AGTTCGGTTGAGTATACTGTTTTGCATATAGACTTGGGTGCTAAATTTCTTGGTGTAAGC 2269 Query 1728 ATTTTT-TCACCCATTGTAAGGTCTTTAACTCTTGGAAAACTTGCGGGAAAATAAAATAA 1786 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2270 ATTTTTAT-ACCCATTGTAAGGTCTTTAACTCTTGGAAAACTTGCGGGAAAATAAAATAA 2328 Query 1787 AGTTGATTTAAAAT 1800 ||||||||| |||| Sbjct 2329 AGTTGATTTCAAAT 2342 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89055766830 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5