BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473396
Length=1414
Score E
Sequences producing significant alignments: (Bits) Value
AT1G32150.1 | Symbols: bZIP68, AtbZIP68 | basic region/leucine ... 2130 0.0
AT2G35530.1 | Symbols: bZIP16, AtbZIP16 | basic region/leucine ... 736 0.0
> AT1G32150.1 | Symbols: bZIP68, AtbZIP68 | basic region/leucine
zipper transcription factor 68 | chr1:11565518-11568531 FORWARD
LENGTH=1617
Length=1617
Score = 2130 bits (1153), Expect = 0.0
Identities = 1263/1317 (96%), Gaps = 4/1317 (0%)
Strand=Plus/Plus
Query 101 TTTAGAAGTTGGTGAATGTGATTAATGGGTAGCAGTGAGATGGAAAAATCAGGTAAAGAG 160
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 TTTGGAAATTGGTGAATGTGATTAATGGGTAGCAGTGAGATGGAAAAATCAGGTAAAGAG 269
Query 161 AAAGAAACTAAGACTCCACCGCCTTCGTCTTCTTCTTCTGCTCCTGCTACTGCTGTTTCA 220
|||||| |||||||| ||||||||||| ||||||| |||||||||||||||| |||||||
Sbjct 270 AAAGAACCTAAGACTACACCGCCTTCGACTTCTTCATCTGCTCCTGCTACTGTTGTTTCA 329
Query 221 CAGGAACCTTCTTCTTCTGTGAGTGCTGGAGTGGC---TACTCAAGATTGGTCTGGTTTC 277
||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||
Sbjct 330 CAGGAACCTTCTTCTGCTGTGAGTGCTGGAGTGGCTGTTACTCAAGATTGGTCTGGCTTC 389
Query 278 CAGGCTTATTCTCCTATGCCACCTCATGGTTACGTAGCATCAAGTCCTCAACCTCACCCT 337
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct 390 CAGGCTTATTCTCCTATGCCGCCTCATGGTTATGTAGCATCAAGTCCTCAACCTCATCCT 449
Query 338 TATATGTGGGGCGTTCAGCATATGATGCCTCCTTATGGAACACCGCCTCATCCATATGTT 397
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 450 TATATGTGGGGCGTTCAGCATATGATGCCGCCTTATGGAACACCGCCTCATCCGTATGTT 509
Query 398 GCAATGTATCCTCCAGGTGGCATGTATGCACATCCTTCATTACCTCCGGGGTCTTATCCA 457
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 510 ACGATGTATCCTCCAGGTGGCATGTATGCTCATCCTTCATTACCTCCGGGGTCTTATCCA 569
Query 458 TATAGTCCCTATGCAATGCCTTCTCCTAATGGAATGGCTGAAGCTTCTGGTAATACTGGT 517
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 TATAGTCCCTATGCAATGCCTTCTCCTAATGGAATGGCTGAAGCTTCTGGTAATACTGGA 629
Query 518 AGTGTTACTGAGGGTGATGCTAAACCATCTGATGGGAACGAAAAATTGCCTATCAAAAGA 577
||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct 630 AGTGTTATTGAGGGTGATGGTAAACCATCTGATGGGAAGGAAAAATTGCCAATCAAAAGA 689
Query 578 TCAAAAGGAAGCTTGGGAAGTTTGAATATGATTATAGGAAAGAAGAATGAAGCTGGAAAA 637
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 690 TCAAAAGGAAGCTTGGGAAGTTTGAATATGATTATAGGAAAGAACAATGAAGCTGGAAAA 749
Query 638 AACTCAGGAGCATCGGCTAATGGAGCTTGTTCTAAAAGTGCTGAGAGCGCTTCTGATGGA 697
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 750 AACTCAGGAGCATCAGCTAATGGAGCTTGTTCTAAAAGTGCTGAGAGCGGTTCTGATGGA 809
Query 698 TCAAGTGACGGAAGTGATGCAAATTCACAAAACGACTCTGGCTCTAGACACAACGGGAAG 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 TCAAGTGACGGAAGTGATGCAAATTCACAAAACGACTCTGGCTCTAGACACAACGGGAAG 869
Query 758 GATGGTGAAACAGCTTCAGAGAGTGGTGGTTCTGCTCATGGACCACCCCGTAATGGAAGT 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 GATGGTGAAACAGCTTCAGAGAGTGGTGGTTCTGCTCATGGACCACCCCGTAATGGAAGT 929
Query 818 AATCTACCGGTGAACCAGACCGTCGCGATCATGCCAGTGTCGGCTACAGGTGTTCCAGGC 877
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 930 AATCTACCAGTGAACCAGACCGTCGCTATCATGCCAGTGTCGGCTACAGGTGTTCCAGGC 989
Query 878 CCACCAACAAATCTAAATATCGGAATGGATTATTGGAGCGGTCATGGGAATGTTTCTGCA 937
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 990 CCACCAACAAATCTAAATATCGGAATGGATTATTGGAGCGGTCATGGGAATGTTTCTGGA 1049
Query 938 GCAGTTCCTGGAGTTGTAGTAGATGGGTCCCAATCACAGCCATGGTTACAGGTTTGTGAT 997
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 1050 GCAGTTCCTGGAGTTGTAGTAGATGGTTCCCAATCACAGCCATGGTTACAGGTTTCTGAT 1109
Query 998 GAGAGAGAGCTTAAGCGACAGAGACGGAAGCAATCCAATAGGGAGTCTGCTCGTAGATCC 1057
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1110 GAGAGAGAGATTAAGCGACAGAGACGGAAGCAATCCAATAGGGAATCTGCTCGTAGATCC 1169
Query 1058 AGGTTGCGTAAACAGGCGGAGTGTGATGAGCTAGCACAACGAGCAGAGGTTTTGAATGGA 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170 AGGTTGCGTAAACAGGCGGAGTGTGATGAGCTAGCACAACGAGCAGAGGTTTTGAATGGA 1229
Query 1118 GAAAACTCAAGTCTTAGAGCAGAAATTAACAAGCTCAGAAGCCAATATGAAGAGCTTCTT 1177
|| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 1230 GAGAACTCAAGTCTTAGAGCAGAAATTAACAAGCTTAAAAGCCAATATGAAGAGCTTCTT 1289
Query 1178 GCTGAAAACAGCTCTCTCAAGAATAAGTTTTCGTCAGTCCCGTCACTAGAAGGAGGAGAC 1237
|||||||| |||||||||||||||||||| ||||||| ||||||||| ||||| ||||||
Sbjct 1290 GCTGAAAATAGCTCTCTCAAGAATAAGTTCTCGTCAGCCCCGTCACTGGAAGGTGGAGAC 1349
Query 1238 TTGGACAAGAACGAGCAAGAACCACAGAGAAGTACACATCAGGATGTTGCGTAGACCACT 1297
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1350 TTGGACAAGAACGAGCAAGAACCACAGAGAAGTACACGTCAGGATGTTGCGTAGACGGCT 1409
Query 1298 CGTGGTTCCGTCAACAACTCAGCTTGACTCAGAGAACAGCAGCTAACAGATCTTTGTAAT 1357
||||||||| || |||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct 1410 CGTGGTTCCTTCCACAACTCAGCTTGACTCA-AGAACAGCAGCTAACAGATATATGTAAT 1468
Query 1358 TTTAGGAACCAGATTTGGTGAGGTTTCTTTAGTGTTTAAATAGGAGGAAGCAGGAAA 1414
|||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct 1469 TTTAGGAACCAGATTTGGTGTGATTTCTTTAGTGTTTAAATAGGAGGAAGCATGAAA 1525
> AT2G35530.1 | Symbols: bZIP16, AtbZIP16 | basic region/leucine
zipper transcription factor 16 | chr2:14922962-14926591 REVERSE
LENGTH=1729
Length=1729
Score = 736 bits (398), Expect = 0.0
Identities = 695/833 (83%), Gaps = 41/833 (5%)
Strand=Plus/Plus
Query 101 TTTA-GAAGTTGGTGAATGTGATTAATGGGTAGCAGTGAGATGGAAAAATCAG-GTAAAG 158
|||| ||| || ||||| |||| |||||| ||||| ||||||||||||||| | ||||||
Sbjct 159 TTTAGGAA-TTAGTGAACGTGA-TAATGGCTAGCAATGAGATGGAAAAATC-GAGTAAAG 215
Query 159 AGAAAGAAACTAAGACTCCACCGCCTTCGTCTTCTTCTTCTGCTCCTGCTACTGCTGTTT 218
|||| ||| |||| | |||| || || |||||||| |||| || || | || ||
Sbjct 216 AGAAGGAACCTAA-A--ACACCTCC-TC--CTTCTTCTACTGC-CC--CT-C-CCT-CTT 263
Query 219 CACAGGAACCTTCTTCTTCTGTGAGTGCTGG-AGTGGCTACTCAAGATTGGTCTGGTTTC 277
||||||||||||| || ||||||||||||| | ||||||||| |||||||||||||||
Sbjct 264 CACAGGAACCTTCATCGGCTGTGAGTGCTGGCA-TGGCTACTCCAGATTGGTCTGGTTTT 322
Query 278 CAGGCTTATTCTCCTAT---GCCACCTCATGGTTACGTAGCATCAAGTCCTCAACCTCAC 334
||||| ||||||||||| ||| ||||||||||| || ||||| ||||| |||||||||
Sbjct 323 CAGGCATATTCTCCTATGCCGCCGCCTCATGGTTATGTGGCATCTAGTCCCCAACCTCAC 382
Query 335 CCTTATATGTGGGGCGTTCAGCATATGATGCCTCCTTATGGAACACCGCCTCATCCATAT 394
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 383 CCTTATATGTGGGGAGTTCAGCATATGATGCCTCCTTATGGAACTCCGCCTCATCCTTAT 442
Query 395 GTTGCAATGTATCCTCCAGGTGGCATGTATGCACATCCTTCATTACCTCCGGGGTCTTAT 454
|||||||||||||| |||||||||||||| |||||||||||| | |||||||| ||||||
Sbjct 443 GTTGCAATGTATCCCCCAGGTGGCATGTACGCACATCCTTCAATGCCTCCGGGTTCTTAT 502
Query 455 CCATATAGTCCCT-ATGCAATGCCTTCTCCTAATGGAATGGCTGAAGCTTCTGGTAATAC 513
|| ||||| |||| |||| ||||||||||| ||||||||| |||||| |||||| |||||
Sbjct 503 CCCTATAG-CCCTTATGCTATGCCTTCTCCAAATGGAATGACTGAAGTTTCTGGCAATAC 561
Query 514 TGGTAGT-GTTACTGAGGGTGATGCTAAACCATCTGATGGGAACGAAAAATTGCCTATCA 572
| || | ||||| ||||||||||||| |||||| | ||| ||||||||||| ||||
Sbjct 562 TAC-AGGCGGCACTGATGGTGATGCTAAACAATCTGAAGTGAAGGAAAAATTGCCCATCA 620
Query 573 AAAGATCAAAAGGAAGCTTGGGAAGTTTGAATATGATTATAGGAAAGAAGAATGAAGCTG 632
||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||| |||
Sbjct 621 AAAGATCAAGAGGAAGCTTGGGAAGTTTGAACATGATTACAGGAAAGAACAATGAACCTG 680
Query 633 GAAAAAACTCAGGAGCATCGGCTAATGGAGCTTGTTCTAAAAGTGCTGAGAGCGCTTCTG 692
| ||||||||||||||||| ||||||||||||| || ||||||| ||||| |||||||
Sbjct 681 GGAAAAACTCAGGAGCATCAGCTAATGGAGCTTACTCCAAAAGTGGGGAGAGTGCTTCTG 740
Query 693 ATGGATCAAGTGACGGAAGTGATGCAAATTCACAAAACGACTCTGGCTCTAGAC-ACAAC 751
|||| |||||||| |||||||||| || || ||||| || || || ||| ||| | |
Sbjct 741 ATGGTTCAAGTGAAGGAAGTGATGGGAACTCTCAAAATGATTCGGGATCTGGACTAGAT- 799
Query 752 GGGAAGGATGGTGAAACAGCTTCAGAGAGTGGTGGTTCTGCTCA-TGGACCACCCCGT-- 808
|| ||||||| |||| |||| ||||||| |||||||||||| || ||| || | |
Sbjct 800 GGAAAGGATGCTGAAGCAGCATCAGAGAATGGTGGTTCTGC-CAATGGTCCGCAAAATGG 858
Query 809 AA-TG--G--A-AG-TAATCTACCGGTGAACCAGACCGT-CGCGATCATGCCAGTGTCGG 860
|| || | | | || ||||||||||| ||||||||| | | ||||||||| || | |
Sbjct 859 AAGTGCTGGTACACCTATTCTACCGGTGAGCCAGACCGTAC-CAATCATGCCAATGACAG 917
Query 861 CTACAGGTGTTCCAGGCCCACCAACAAATCTAAATATCGGAATGGATTATTGG 913
|| |||||||||| ||||||||||||||| ||||||| || |||||||| |||
Sbjct 918 CTGCAGGTGTTCCTGGCCCACCAACAAATTTAAATATTGGGATGGATTACTGG 970
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69678356460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5