BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473426
Length=1593
Score E
Sequences producing significant alignments: (Bits) Value
AT1G32380.1 | Symbols: PRS2 | phosphoribosyl pyrophosphate (PRP... 2087 0.0
AT2G35390.2 | Symbols: | Phosphoribosyltransferase family prot... 1229 0.0
> AT1G32380.1 | Symbols: PRS2 | phosphoribosyl pyrophosphate (PRPP)
synthase 2 | chr1:11681752-11684478 FORWARD LENGTH=1733
Length=1733
Score = 2087 bits (1130), Expect = 0.0
Identities = 1314/1400 (94%), Gaps = 23/1400 (2%)
Strand=Plus/Plus
Query 127 CAGGTGTTTCCGACGTATATATATTCTTACATATGGCGTCGTTGGCTCTGACTTCTCCTC 186
||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct 254 CAGGTGTTTCCGACG--TATATA-T-TTACATATGGCGTCGTTGGCTCTGACTTCTCCTC 309
Query 187 CCGCCGTTAAGATTCCGTCGTACCTGTCATCGTCTTCTTCGTCTCTCTTCTCTCGTTCCT 246
|| ||||||||||||| ||||| || || ||||| ||||||||||||||||| |||||||
Sbjct 310 CCTCCGTTAAGATTCCTTCGTATCTCTCCTCGTCGTCTTCGTCTCTCTTCTCCCGTTCCT 369
Query 247 CGATTTCCTTCAGGAACACTGAGTCTCGCTCTCGAATCTGCGTTTCTGGTTACGCGAAAT 306
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 CGATTTCTTTCAGGACCACTGAGTCTCGCTCTCGAATCTGCGTTTCTGGTTACGCGAAAT 429
Query 307 GCAATTTGCCTAAGGCACTAAACGGGAACGCTCG-GATTCCAATTATTAATGAGACGACA 365
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 430 GCAATTTGCCTAAGGCACTAAACGGGAACGCTCGTG-TTCCAATTATTAATGAGACGACA 488
Query 366 ATTCCAAAGTTCTTTGATTCTTCACGGTTGGAGAAATCGGTTAGTAGAAACAATACCAAG 425
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 489 ATTCCTAAGTTCTTTGATTCTTCACGGTTGGAGAAATCGGTTAGTAGAAACAATACTAAG 548
Query 426 CTTAAGTTGTTCTCTGGTACTGCAAATCCAGCTCTATCTCAGGAAATTGCTTGGTATATG 485
|| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 549 CTCAAGTTGTTCTCTGGTACTGCTAATCCAGCTTTATCTCAGGAAATTGCTTGGTATATG 608
Query 486 GGCT-TGGAGCTTGGGAAGGTTAGCATAAAGAGATTTGCTGATGGAGAGATTTACGTTCA 544
|| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 609 GG-TCTGGAGCTTGGGAAGGTTAGCATAAAGAGATTTGCTGATGGAGAGATCTATGTTCA 667
Query 545 GCTGAAAGAGAGTGTTAGAGGTTGCGATGTCTTTTTGGTGCAGCCTACTTGCACTCCAAC 604
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 668 GCTCAAAGAAAGTGTTAGAGGTTGCGATGTCTTTTTGGTGCAGCCTACTTGCACTCCAAC 727
Query 605 AAATGAGAATCTTATGGAGCTTTTGATCATGGTGGATGCTTGCCGAAGAGCATCGGCTAA 664
||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 728 TAATGAGAATCTCATGGAGCTATTGATCATGGTGGATGCTTGCCGAAGAGCATCAGCTAA 787
Query 665 GAAAGTAACAGCCGTGATTCCGTATTTTGGATACGCAAGAGCTGATAGAAAGACACAAGG 724
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 GAAAGTCACAGCTGTGATTCCGTATTTTGGATACGCAAGAGCTGATAGAAAGACACAAGG 847
Query 725 GCGTGAATCCATTGCTGCCAAATTGGTAGCAAACCTTATAACAGAAGCCGGTGCAGATAG 784
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 GCGTGAATCTATTGCTGCCAAATTGGTAGCAAACCTTATAACAGAAGCCGGTGCAGATAG 907
Query 785 GGTTCTGGCTTGTGATCTTCATTCAGGACAATCCATGGGTTATTTTGACATACCAGTGGA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 908 GGTTCTGGCTTGTGATCTTCATTCAGGACAATCCATGGGTTATTTTGACATACCAGTGGA 967
Query 845 TCATGTCTATTGCCAGCCTGTGATTCTTGATTATCTTGCTAGCAAGTCAATTTCCTCTGA 904
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 968 TCATGTCTATTGCCAGCCTGTGATACTTGATTATCTTGCTAGCAAGTCAATTTCCTCTGA 1027
Query 905 GGATTTGGTAGTGGTTTCTCCTGATGTTGGTGGAGTAGCCAGGGCACGTGCATTTGCTAA 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 GGATTTGGTAGTGGTTTCTCCTGATGTTGGTGGAGTAGCCAGGGCACGTGCATTTGCTAA 1087
Query 965 GAAATTATCTGATGCGCCACTCGCCATTGTCGATAAAAGGCGTCACGGCCATAATGTTGC 1024
||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1088 GAAATTATCTGATGCACCACTTGCCATTGTCGATAAAAGGCGTCACGGCCACAATGTCGC 1147
Query 1025 TGAGGTCATGAACCTAATCGGTGATGTTAAAGGGAAAGTGGCAGTTATGGTGGATGACAT 1084
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 1148 TGAGGTCATGAACCTAATCGGTGATGTTAAAGGGAAGGTGGCAGTAATGGTGGATGATAT 1207
Query 1085 GATTGATACCGCTGGAACCATTGTGAAAGGAGCAGCTCTTTTACACGAGGAGGGTGCACG 1144
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1208 TATTGATACAGCTGGAACCATTGTGAAAGGAGCAGCTCTTTTACACGAGGAGGGTGCACG 1267
Query 1145 TGAGGTTTACGCTTGCTGTACACATGCGGTTTTCAGTCCGCCTGCGATAGAGCGGTTATC 1204
|||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1268 TGAGGTTTACGCTTGCTGTACACACGCTGTTTTCAGTCCTCCTGCGATAGAGCGGTTATC 1327
Query 1205 AAGTGGTTTGTTGCAAGAAGTGATAGTGACGAATACTTTACCAGTAGTGGAGAAGAATTA 1264
||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1328 AAGCGGTTTGCTGCAAGAAGTGATAGTGACGAATACTTTACCAGTAGCGGAGAAGAATTA 1387
Query 1265 CTTCCCGCAGTTAACGATTTTATCGGTGGCTAACCTTCTGGGTGAGACCATATGGCGTGT 1324
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1388 CTTCCCGCAGTTAACGATATTATCGGTGGCTAATCTTCTGGGTGAGACCATTTGGCGTGT 1447
Query 1325 CCATGATGATAGCTCCGTTAGTAGCATTTTCCTTTGACACAAGTTGGTTTTTGTTAATCA 1384
|||||||||||||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct 1448 CCATGATGATAGCTCCGTTAGTAGTATTTTCCTTTGATACTTGTTGGTTTTTGTTAATCG 1507
Query 1385 GTTTTGGGTT--TAAAAATTCCTCCttttttttttctacttcttcttc-acagtttctag 1441
|||| || | | || |||||| |||||| || ||||||||||| | |||||||||||
Sbjct 1508 GTTTAGGATCGGTCTAAGTTCCTC-TTTTTTGTT-CTACTTCTTCT-CGACAGTTTCTAG 1564
Query 1442 tctatctctaaccatgtttttacttctctttctCACCCAAACTATGTCACTGAGTTTTAT 1501
|||| | |||||| || |||||||| |||||| ||| |||||||| |||| |||
Sbjct 1565 TCTA-----A-CCATGTCTTG-CTTCTCTTACTCACCTAAAGTATGTCAC--AGTTCTAT 1615
Query 1502 CTTTTCTTCTTTTTAGTATA 1521
|||||||||||||||| |||
Sbjct 1616 CTTTTCTTCTTTTTAGCATA 1635
Score = 122 bits (66), Expect = 7e-27
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 1 AAATTCCAAATATCGAGAAAGAGAGAAGA-CCATCGCCGCACCGCTTGAGTCACTCTTCT 59
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 11 AAATTCCAAATTTCGAGAAAGAGAGAAGACCCATCGCCGCACCGCTTGAGTCACTCTTCT 70
Query 60 TCCCGGAGAAGAA 72
|||||||||||||
Sbjct 71 TCCCGGAGAAGAA 83
> AT2G35390.2 | Symbols: | Phosphoribosyltransferase family protein
| chr2:14895279-14897822 REVERSE LENGTH=1702
Length=1702
Score = 1229 bits (665), Expect = 0.0
Identities = 921/1045 (88%), Gaps = 16/1045 (2%)
Strand=Plus/Plus
Query 326 AAACGGGAA-CGCTCGGATTCCAATTATTAATGAGACGACAATTCCAAAGTTCTTTGATT 384
||||||||| | | | || |||||||||||||||| |||| ||||||||||||| || |
Sbjct 418 AAACGGGAATC-CAAGTATCCCAATTATTAATGAGAGGACACTTCCAAAGTTCTTGGAAT 476
Query 385 CTTCACGGT-TGGAGAAATCGGTTAGTAGAAACAATACCAAGCTT-AAGTTGTTCTCTGG 442
|| | | || |||||||||| || | ||||| ||||| |||| || ||||||||||||||
Sbjct 477 CTGCTC-GTATGGAGAAATCAGTCAATAGAACCAATA-CAAGGTTGAAGTTGTTCTCTGG 534
Query 443 TACTGCAAATCCAGCTCTAT-CTCAGGAAATTGCTTGGTATATGGGCTTGGAGCTTGGGA 501
||||||||||||||| || | ||||||||||||||||||||||||||||||| ||||| |
Sbjct 535 TACTGCAAATCCAGCACT-TGCTCAGGAAATTGCTTGGTATATGGGCTTGGATCTTGGCA 593
Query 502 AGGTTAGCATAAAGAGATTTGCTGATGGAGAGATTTACGTTCAGCTGA-AAGAGAGTGTT 560
|||||| || ||||| ||||||||||||||||| || |||||||| | ||||||| |||
Sbjct 594 AGGTTAATATTAAGAGGTTTGCTGATGGAGAGATCTATGTTCAGCT-ACAAGAGAGCGTT 652
Query 561 AGAGGTTGCGATGTCTTTTTGGTGCAGCCTACTTGCACTCCAACAAATGAGAATCTTATG 620
|| || || || |||| |||||||||||||||||||||||| || ||||||||||| |||
Sbjct 653 AGGGGATGTGACGTCTATTTGGTGCAGCCTACTTGCACTCCCACTAATGAGAATCTCATG 712
Query 621 GAGCTTTTGATCATGGTGGATGCTTGCCGAAGAGCATCGGCTAAGAAAGTAACAGCCGTG 680
||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 713 GAGCTTTTGATTATGGTAGATGCTTGCCGAAGAGCATCAGCTAAGAAAGTTACAGCTGTG 772
Query 681 ATTCCGTATTTTGGATACGCAAGAGCTGATAGAAAGACACAAGGGCGTGAATCCATTGCT 740
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct 773 ATTCCGTATTTTGGATATGCAAGAGCTGACAGGAAGACACAAGGGCGTGAATCCATTGCT 832
Query 741 GCCAAATTGGTAGCAAACCTTATAACAGAAGCCGGTGCAGATAGGGTTCTGGCTTGTGAT 800
||||||||||| ||||| ||||| || ||||| ||||||||| | ||||| |||||||||
Sbjct 833 GCCAAATTGGTTGCAAATCTTATCACTGAAGCTGGTGCAGATCGAGTTCTTGCTTGTGAT 892
Query 801 CTTCATTCAGGACAATCCATGGGTTATTTTGACATACCAGTGGATCATGTCTATTGCCAG 860
|||||||||||||| || ||||||||||||||||| ||||| || ||||| || ||||||
Sbjct 893 CTTCATTCAGGACAGTCGATGGGTTATTTTGACATTCCAGTCGACCATGTGTACTGCCAG 952
Query 861 CCTGTGATTCTTGATTATCTTGCTAGCAAGTCAATTTCCTCTGAGGATTTGGTAGTGGTT 920
|| ||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 953 CCGGTGATACTTGATTATCTTGCTAGCAAGTCAATTCCCTCAGAGGATTTGGTAGTGGTT 1012
Query 921 TCTCCTGATGTTGGTGGAGTAGCCAGGGCACGTGCATTTGCTAAGAAATTATCTGATGCG 980
||||||||||||||||||||||||||||| || || ||||| ||||||||||| |||||
Sbjct 1013 TCTCCTGATGTTGGTGGAGTAGCCAGGGCCCGCGCTTTTGCAAAGAAATTATCAGATGCA 1072
Query 981 CCACTCGCCATTGTCGATAAAAGGCGT-CACGGCCATAATGTTGCTGAGGTCATGAACCT 1039
||||| ||||||||||||||||||||| | || || |||||||||||||||||||||||
Sbjct 1073 CCACTTGCCATTGTCGATAAAAGGCGTTCT-GGACACAATGTTGCTGAGGTCATGAACCT 1131
Query 1040 AATCGGTGATGTTAA-AGGGAAAGTGGCAGTTATGGTGGATGACATGATTGATACCGCTG 1098
||| |||||||| || |||||| |||||| | ||||||||||| ||||||||||| ||||
Sbjct 1132 AATTGGTGATGT-AAGAGGGAAGGTGGCAATAATGGTGGATGATATGATTGATACTGCTG 1190
Query 1099 GAACCATTGTGAAAGGAGCAGCTCTT-TTACACGAGGAGGGTGCACGTGAGGTTTACGCT 1157
|||||||||| |||||||||||| || |||||| |||| ||||| || ||||| || ||
Sbjct 1191 GAACCATTGTAAAAGGAGCAGCT-TTGTTACACCAGGAAGGTGCTCGGGAGGTATATGCG 1249
Query 1158 TGCTGTACACATGCGGTTTTCAGTCCGCCTGCGATAGAGCGGTTATCAAGTGGTTTGTTG 1217
||||| ||||| || |||||||| ||||| ||||||||||| |||||| | |||||| ||
Sbjct 1250 TGCTGCACACACGCTGTTTTCAGCCCGCCAGCGATAGAGCGATTATCAGGGGGTTTGCTG 1309
Query 1218 CAAGAAGTGATAGTGACGAATACTTTACCAGTAGTGGAGAAGAATTACTTCCCGCAGTTA 1277
||||||||||||||||| || || ||||| |||| ||||||||||||||||||||||||
Sbjct 1310 CAAGAAGTGATAGTGACAAACACATTACCTGTAGCAGAGAAGAATTACTTCCCGCAGTTA 1369
Query 1278 ACGATTTTATCGGTGGCTAACCTTCTGGGTGAGACCATATGGCGTGTCCATGATGATAGC 1337
|| || ||||| |||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct 1370 ACAATATTATCAGTGGCTAATCTCCTGGGTGAGACCATTTGGCGTGTGCATGATGATAGT 1429
Query 1338 TCCGTTAGTAGCATTTTCCTTTGAC 1362
||||| |||||||||||||||||||
Sbjct 1430 TCCGTCAGTAGCATTTTCCTTTGAC 1454
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78664254015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5